| 1 |
3780
|
daigle
|
<%@ page language="java" %>
|
| 2 |
|
|
<%
|
| 3 |
|
|
/**
|
| 4 |
|
|
* '$RCSfile$'
|
| 5 |
|
|
* Authors: Matt Jones
|
| 6 |
|
|
* Copyright: 2008 Regents of the University of California and the
|
| 7 |
|
|
* National Center for Ecological Analysis and Synthesis
|
| 8 |
|
|
* For Details: http://www.nceas.ucsb.edu/
|
| 9 |
|
|
*
|
| 10 |
|
|
* '$Author$'
|
| 11 |
|
|
* '$Date$'
|
| 12 |
|
|
* '$Revision$'
|
| 13 |
|
|
*
|
| 14 |
|
|
* This is an HTML document for displaying metadata catalog tools
|
| 15 |
|
|
*
|
| 16 |
|
|
* This program is free software; you can redistribute it and/or modify
|
| 17 |
|
|
* it under the terms of the GNU General Public License as published by
|
| 18 |
|
|
* the Free Software Foundation; either version 2 of the License, or
|
| 19 |
|
|
* (at your option) any later version.
|
| 20 |
|
|
*
|
| 21 |
|
|
* This program is distributed in the hope that it will be useful,
|
| 22 |
|
|
* but WITHOUT ANY WARRANTY; without even the implied warranty of
|
| 23 |
|
|
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
| 24 |
|
|
* GNU General Public License for more details.
|
| 25 |
|
|
*
|
| 26 |
|
|
* You should have received a copy of the GNU General Public License
|
| 27 |
|
|
* along with this program; if not, write to the Free Software
|
| 28 |
|
|
* Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
| 29 |
|
|
*/
|
| 30 |
|
|
%>
|
| 31 |
|
|
|
| 32 |
|
|
<%@ include file="../../common/common-settings.jsp"%>
|
| 33 |
4080
|
daigle
|
<%@ include file="../../common/configure-check.jsp"%>
|
| 34 |
3780
|
daigle
|
|
| 35 |
|
|
<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
|
| 36 |
|
|
<html>
|
| 37 |
|
|
<head>
|
| 38 |
|
|
<title>OBFS Data Registry</title>
|
| 39 |
|
|
<link rel="stylesheet" type="text/css"
|
| 40 |
|
|
href="<%=STYLE_SKINS_URL%>/obfs/obfs.css"></link>
|
| 41 |
|
|
<script language="JavaScript" type="text/JavaScript"
|
| 42 |
|
|
src="<%=STYLE_SKINS_URL%>/obfs/obfs.js"></script>
|
| 43 |
|
|
<script language="JavaScript" type="text/JavaScript"
|
| 44 |
|
|
src="<%=STYLE_COMMON_URL%>/branding.js"></script>
|
| 45 |
|
|
<script language="Javascript">
|
| 46 |
|
|
|
| 47 |
|
|
function trim(stringToTrim) {
|
| 48 |
|
|
return stringToTrim.replace(/^\s*/, '').replace(/\s*$/,'');
|
| 49 |
|
|
}
|
| 50 |
|
|
|
| 51 |
|
|
function checkSearch(submitFormObj) {
|
| 52 |
|
|
var searchString = trim(submitFormObj.searchstring.value);
|
| 53 |
|
|
var checkBox = document.getElementById("searchAll");
|
| 54 |
|
|
|
| 55 |
|
|
if (searchString=="") {
|
| 56 |
|
|
if (confirm("Show *all* data in the KNB?")) {
|
| 57 |
|
|
searchString = "%";
|
| 58 |
|
|
} else {
|
| 59 |
|
|
return false;
|
| 60 |
|
|
}
|
| 61 |
|
|
}
|
| 62 |
|
|
|
| 63 |
|
|
if(!checkBox.checked && searchString!="%"){
|
| 64 |
|
|
submitFormObj.query.value = "<pathquery version=\"1.2\">"
|
| 65 |
|
|
+"<querytitle>Web-Search</querytitle>"
|
| 66 |
5710
|
leinfelder
|
+"<returndoctype>eml://ecoinformatics.org/eml-2.1.1</returndoctype>"
|
| 67 |
4505
|
daigle
|
+"<returndoctype>eml://ecoinformatics.org/eml-2.1.0</returndoctype>"
|
| 68 |
3780
|
daigle
|
+"<returndoctype>eml://ecoinformatics.org/eml-2.0.1</returndoctype>"
|
| 69 |
|
|
+"<returndoctype>eml://ecoinformatics.org/eml-2.0.0</returndoctype>"
|
| 70 |
|
|
+"<returndoctype>-//ecoinformatics.org//eml-dataset-2.0.0beta6//EN</returndoctype>"
|
| 71 |
|
|
+"<returndoctype>-//ecoinformatics.org//eml-dataset-2.0.0beta4//EN</returndoctype>"
|
| 72 |
|
|
+"<returndoctype>-//NCEAS//resource//EN</returndoctype>"
|
| 73 |
|
|
+"<returndoctype>-//NCEAS//eml-dataset//EN</returndoctype>"
|
| 74 |
|
|
+"<returnfield>originator/individualName/surName</returnfield>"
|
| 75 |
|
|
+"<returnfield>originator/individualName/givenName</returnfield>"
|
| 76 |
|
|
+"<returnfield>creator/individualName/surName</returnfield>"
|
| 77 |
|
|
+"<returnfield>creator/individualName/givenName</returnfield>"
|
| 78 |
|
|
+"<returnfield>originator/organizationName</returnfield>"
|
| 79 |
|
|
+"<returnfield>creator/organizationName</returnfield>"
|
| 80 |
|
|
+"<returnfield>dataset/title</returnfield>"
|
| 81 |
|
|
+"<returnfield>keyword</returnfield>"
|
| 82 |
|
|
+"<querygroup operator=\"INTERSECT\">"
|
| 83 |
|
|
+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
|
| 84 |
|
|
+"<value>Organization of Biological Field Stations</value>"
|
| 85 |
|
|
+"<pathexpr>organizationName</pathexpr>"
|
| 86 |
|
|
+"</queryterm>"
|
| 87 |
|
|
+"<querygroup operator=\"UNION\">"
|
| 88 |
|
|
+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
|
| 89 |
|
|
+"<value>" + searchString + "</value>"
|
| 90 |
|
|
+"<pathexpr>surName</pathexpr>"
|
| 91 |
|
|
+"</queryterm>"
|
| 92 |
|
|
+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
|
| 93 |
|
|
+"<value>" + searchString + "</value>"
|
| 94 |
|
|
+"<pathexpr>givenName</pathexpr>"
|
| 95 |
|
|
+"</queryterm>"
|
| 96 |
|
|
+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
|
| 97 |
|
|
+"<value>" + searchString + "</value>"
|
| 98 |
|
|
+"<pathexpr>keyword</pathexpr>"
|
| 99 |
|
|
+"</queryterm>"
|
| 100 |
|
|
+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
|
| 101 |
|
|
+"<value>" + searchString + "</value>"
|
| 102 |
|
|
+"<pathexpr>para</pathexpr>"
|
| 103 |
|
|
+"</queryterm>"
|
| 104 |
|
|
+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
|
| 105 |
|
|
+"<value>" + searchString + "</value>"
|
| 106 |
|
|
+"<pathexpr>geographicDescription</pathexpr>"
|
| 107 |
|
|
+"</queryterm>"
|
| 108 |
|
|
+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
|
| 109 |
|
|
+"<value>" + searchString + "</value>"
|
| 110 |
|
|
+"<pathexpr>literalLayout</pathexpr>"
|
| 111 |
|
|
+"</queryterm>"
|
| 112 |
|
|
+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
|
| 113 |
|
|
+"<value>" + searchString + "</value>"
|
| 114 |
|
|
+"<pathexpr>title</pathexpr>"
|
| 115 |
|
|
+"</queryterm>"
|
| 116 |
|
|
+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
|
| 117 |
|
|
+"<value>" + searchString + "</value>"
|
| 118 |
|
|
+"<pathexpr>@packageId</pathexpr>"
|
| 119 |
|
|
+"</queryterm>"
|
| 120 |
|
|
+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
|
| 121 |
|
|
+"<value>" + searchString + "</value>"
|
| 122 |
|
|
+"<pathexpr>abstract/para</pathexpr>"
|
| 123 |
|
|
+"</queryterm>"
|
| 124 |
|
|
+"</querygroup>"
|
| 125 |
|
|
+"</querygroup>"
|
| 126 |
|
|
+"</pathquery>";
|
| 127 |
|
|
} else {
|
| 128 |
|
|
queryTermString = "";
|
| 129 |
|
|
if(searchString != "%"){
|
| 130 |
|
|
queryTermString = "<queryterm searchmode=\"contains\" casesensitive=\"false\">"
|
| 131 |
|
|
+"<value>" + searchString + "</value>"
|
| 132 |
|
|
+"</queryterm>";
|
| 133 |
|
|
}
|
| 134 |
|
|
submitFormObj.query.value = "<pathquery version=\"1.2\">"
|
| 135 |
|
|
+"<querytitle>Web-Search</querytitle>"
|
| 136 |
5710
|
leinfelder
|
+"<returndoctype>eml://ecoinformatics.org/eml-2.1.1</returndoctype>"
|
| 137 |
4505
|
daigle
|
+"<returndoctype>eml://ecoinformatics.org/eml-2.1.0</returndoctype>"
|
| 138 |
3780
|
daigle
|
+"<returndoctype>eml://ecoinformatics.org/eml-2.0.1</returndoctype>"
|
| 139 |
|
|
+"<returndoctype>eml://ecoinformatics.org/eml-2.0.0</returndoctype>"
|
| 140 |
|
|
+"<returndoctype>-//ecoinformatics.org//eml-dataset-2.0.0beta6//EN</returndoctype>"
|
| 141 |
|
|
+"<returndoctype>-//ecoinformatics.org//eml-dataset-2.0.0beta4//EN</returndoctype>"
|
| 142 |
|
|
+"<returndoctype>-//NCEAS//resource//EN</returndoctype>"
|
| 143 |
|
|
+"<returndoctype>-//NCEAS//eml-dataset//EN</returndoctype>"
|
| 144 |
|
|
+"<returnfield>originator/individualName/surName</returnfield>"
|
| 145 |
|
|
+"<returnfield>originator/individualName/givenName</returnfield>"
|
| 146 |
|
|
+"<returnfield>creator/individualName/surName</returnfield>"
|
| 147 |
|
|
+"<returnfield>creator/individualName/givenName</returnfield>"
|
| 148 |
|
|
+"<returnfield>originator/organizationName</returnfield>"
|
| 149 |
|
|
+"<returnfield>creator/organizationName</returnfield>"
|
| 150 |
|
|
+"<returnfield>dataset/title</returnfield>"
|
| 151 |
|
|
+"<returnfield>keyword</returnfield>"
|
| 152 |
|
|
+"<querygroup operator=\"INTERSECT\">"
|
| 153 |
|
|
+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
|
| 154 |
|
|
+"<value>Organization of Biological Field Stations</value>"
|
| 155 |
|
|
+"<pathexpr>organizationName</pathexpr>"
|
| 156 |
|
|
+"</queryterm>"
|
| 157 |
|
|
+ queryTermString
|
| 158 |
|
|
+"</querygroup>"
|
| 159 |
|
|
+"</pathquery>";
|
| 160 |
|
|
|
| 161 |
|
|
}
|
| 162 |
|
|
return true;
|
| 163 |
|
|
}
|
| 164 |
|
|
|
| 165 |
|
|
function searchAll(){
|
| 166 |
|
|
var checkBox = document.getElementById("searchCheckBox");
|
| 167 |
|
|
if(checkBox.checked == true){
|
| 168 |
|
|
alert("You have selected to search all possible existing fields. This search will take longer.");
|
| 169 |
|
|
}
|
| 170 |
|
|
}
|
| 171 |
|
|
|
| 172 |
|
|
</script>
|
| 173 |
|
|
</head>
|
| 174 |
|
|
<body>
|
| 175 |
|
|
<script language="JavaScript">
|
| 176 |
4080
|
daigle
|
insertTemplateOpening("<%=CONTEXT_URL%>");
|
| 177 |
|
|
insertSearchBox("<%=CONTEXT_URL%>");
|
| 178 |
3780
|
daigle
|
</script>
|
| 179 |
|
|
<table width="760" border="0" cellspacing="0" cellpadding="0">
|
| 180 |
|
|
<tr><td colspan="5">
|
| 181 |
|
|
<p>
|
| 182 |
|
|
Welcome to the OBFS Data Registry. This is the primary source for
|
| 183 |
|
|
comprehensive information about scientific and research data sets collected
|
| 184 |
|
|
within or under the auspices of the Organization of Biological Field Stations.
|
| 185 |
|
|
</p>
|
| 186 |
|
|
</td></tr>
|
| 187 |
|
|
<tr><td colspan="5">
|
| 188 |
|
|
<p>This project is a cooperative effort of <a href="http://www.obfs.org">OBFS</a>,
|
| 189 |
|
|
the <a href="http://www.nceas.ucsb.edu">National Center for
|
| 190 |
|
|
Ecological Analysis and Synthesis (NCEAS)</a>, the
|
| 191 |
|
|
<a href="http://nrs.ucop.edu">UC Natural Reserve System</a>, and the
|
| 192 |
|
|
<a href="http://www.lternet.edu">LTER Network Office</a>.
|
| 193 |
|
|
The Data Registry is based on software developed by the
|
| 194 |
|
|
<a href="http://knb.ecoinformatics.org">Knowledge Network for
|
| 195 |
|
|
Biocomplexity (KNB)</a>, and
|
| 196 |
|
|
houses metadata that are compliant with
|
| 197 |
|
|
<a href="http://knb.ecoinformatics.org/software/eml/">Ecological Metadata
|
| 198 |
|
|
Language (EML)</a>.
|
| 199 |
|
|
</p>
|
| 200 |
|
|
</td></tr>
|
| 201 |
|
|
<tr><td colspan="5">
|
| 202 |
|
|
<p>
|
| 203 |
|
|
Credit for the data sets in this registry goes to the investigators who
|
| 204 |
|
|
collected the data, and also to the OBFS sites and system for providing
|
| 205 |
|
|
an effective and pleasant environment for research and education at
|
| 206 |
|
|
the individual research stations.
|
| 207 |
|
|
Our particular thanks go out to the OBFS reserve managers, scientists,
|
| 208 |
|
|
and stewards for their comments and continuing support.
|
| 209 |
|
|
</p>
|
| 210 |
|
|
</td></tr>
|
| 211 |
|
|
<tr><td colspan="5">
|
| 212 |
|
|
<p><b>Registry Tools</b></p>
|
| 213 |
|
|
<p>
|
| 214 |
|
|
<menu>
|
| 215 |
|
|
<li><span class="searchbox"><a name="search"> Search for Data Sets</a></span><br />
|
| 216 |
|
|
<menu>
|
| 217 |
|
|
<form method="POST" action="<%=SERVLET_URL%>" target="_top" onSubmit="return checkSearch(this)">
|
| 218 |
|
|
<input value="UNION" name="operator" type="hidden">
|
| 219 |
|
|
<input size="14" name="searchstring" type="text" value="" id="searchBox">
|
| 220 |
|
|
<input name="query" type="hidden"/>
|
| 221 |
|
|
<input name="qformat" value="obfs" type="hidden">
|
| 222 |
|
|
<input name="enableediting" value="true" type="hidden">
|
| 223 |
|
|
<input type="hidden" name="action" value="squery">
|
| 224 |
|
|
<input value="Search" type="submit">
|
| 225 |
|
|
</form>
|
| 226 |
|
|
<form>
|
| 227 |
|
|
<input name="search" type="radio" checked><span class="text_plain"> Search Title, Abstract, Keywords, Personnel (Quicker)</span></input><br>
|
| 228 |
|
|
<input name="search" type="radio" id="searchAll"><span class="text_plain"> Search all fields (Slower)</span></input><br>
|
| 229 |
|
|
</form>
|
| 230 |
|
|
|
| 231 |
|
|
This tool allows you to search the registry for data
|
| 232 |
|
|
sets of interest. When you type text in the box and
|
| 233 |
|
|
click on the "Search" button, the search will only
|
| 234 |
|
|
be conducted within the title, author, abstract,
|
| 235 |
|
|
and keyword fields. Checking the "Search All Fields"
|
| 236 |
|
|
box will search on these and all other existing
|
| 237 |
|
|
fields (this search will take more time).
|
| 238 |
|
|
<br><br>
|
| 239 |
|
|
You can use the '%' character as a wildcard in your
|
| 240 |
|
|
searches (e.g., '%biodiversity%' would locate any
|
| 241 |
|
|
phrase with the word biodiversity embedded within it).
|
| 242 |
|
|
</menu>
|
| 243 |
|
|
<br><br>
|
| 244 |
|
|
</li>
|
| 245 |
|
|
|
| 246 |
5710
|
leinfelder
|
<li><a href="<%=SERVLET_URL%>?action=query&operator=INTERSECT&anyfield=%25&organizationName=Organization%20of%20Biological%20Field%20Stations&qformat=obfs&enableediting=true&returndoctype=eml://ecoinformatics.org/eml-2.1.1&returndoctype=eml://ecoinformatics.org/eml-2.1.0&returndoctype=eml://ecoinformatics.org/eml-2.0.1&returndoctype=eml://ecoinformatics.org/eml-2.0.0&returndoctype=-//ecoinformatics.org//eml-dataset-2.0.0beta6//EN&returndoctype=-//ecoinformatics.org//eml-dataset-2.0.0beta4//EN&returnfield=dataset/title&returnfield=keyword&returnfield=originator/individualName/surName&returnfield=creator/individualName/surName&returnfield=originator/organizationName&returnfield=creator/organizationName">Browse existing OBFS data sets</a><br />
|
| 247 |
3780
|
daigle
|
<menu>
|
| 248 |
|
|
The registry search system is used to locate data sets of interest
|
| 249 |
|
|
by searching through existing registered data sets.
|
| 250 |
|
|
Presently the search covers all fields, including
|
| 251 |
|
|
author, title, abstract, keywords, and other documentation
|
| 252 |
|
|
for each dataset. (More sophisticated search capabilities,
|
| 253 |
|
|
including boolean field searches, will be available in future.)
|
| 254 |
|
|
</menu>
|
| 255 |
|
|
</li>
|
| 256 |
|
|
<p> </p>
|
| 257 |
|
|
<li><a href="<%=CGI_URL%>/register-dataset.cgi?cfg=obfs">Register a new OBFS
|
| 258 |
|
|
data set</a><br />
|
| 259 |
|
|
<menu>
|
| 260 |
|
|
The registration page is used to submit information about a <b>new</b>
|
| 261 |
|
|
data set associated with OBFS research. The documentation about the
|
| 262 |
|
|
data set will be reviewed and then submitted to the Registry.
|
| 263 |
|
|
</menu>
|
| 264 |
|
|
</li>
|
| 265 |
|
|
<p> </p>
|
| 266 |
|
|
<li>
|
| 267 |
|
|
<a href="map.jsp"> View Interactive Map </a>
|
| 268 |
|
|
<menu> View and query the geographic coverages of the data sets. </menu>
|
| 269 |
|
|
</li>
|
| 270 |
|
|
|
| 271 |
|
|
</menu>
|
| 272 |
|
|
</p>
|
| 273 |
|
|
</td></tr>
|
| 274 |
|
|
</table>
|
| 275 |
|
|
<p> </p>
|
| 276 |
|
|
<script language="JavaScript">
|
| 277 |
4080
|
daigle
|
insertTemplateClosing("<%=CONTEXT_URL%>");
|
| 278 |
3780
|
daigle
|
</script>
|
| 279 |
|
|
</body>
|
| 280 |
|
|
</html>
|