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<?xml version="1.0"?>
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<!--
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* '$RCSfile$'
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* Authors: Matt Jones, CHad Berkley
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* Copyright: 2000 Regents of the University of California and the
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* National Center for Ecological Analysis and Synthesis
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* For Details: http://www.nceas.ucsb.edu/
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*
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* '$Author: leinfelder $'
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* '$Date: 2010-08-30 23:34:14 +0000 (Mon, 30 Aug 2010) $'
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* '$Revision: 5533 $'
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*
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* This program is free software; you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation; either version 2 of the License, or
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* (at your option) any later version.
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*
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* This program is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with this program; if not, write to the Free Software
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* Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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*
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* This is an XSLT (http://www.w3.org/TR/xslt) stylesheet designed to
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* convert an XML file showing the resultset of a query
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* into an HTML format suitable for rendering with modern web browsers.
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-->
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<xsl:stylesheet
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xmlns:xsl="http://www.w3.org/1999/XSL/Transform"
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xmlns:sms="http://ecoinformatics.org/sms/annotation.0.9"
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xmlns:fn="http://www.w3.org/2005/xpath-functions"
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version="2.0">
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<xsl:output method="html" />
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<xsl:param name="sessionid" />
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<xsl:param name="qformat">semtools</xsl:param>
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<xsl:param name="enableediting">false</xsl:param>
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<xsl:param name="contextURL"/>
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<xsl:param name="tripleURI"><xsl:value-of select="$contextURL" /><![CDATA[/metacat?action=read&qformat=]]><xsl:value-of select="$qformat" /><![CDATA[&sessionid=]]><xsl:value-of select="$sessionid" /><![CDATA[&docid=]]></xsl:param>
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<xsl:key name="mapping" match="//*[local-name()='map']" use="concat(../@id, @measurement)" />
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<xsl:key name="attributes" match="//*[local-name()='map']" use="concat(../@id, @attribute)" />
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<xsl:key name="measurements" match="//*[local-name()='measurement']" use="concat(../../@id, @label)" />
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<xsl:template name="annotation">
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<xsl:param name="showAll">true</xsl:param>
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<table align="center" width="100%" class="subGroup">
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<tr>
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<td>
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<!-- annotation summary -->
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<xsl:call-template name="annotationSearchResult" />
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</td>
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</tr>
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<xsl:if test="$showAll='true'">
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<xsl:for-each select="./*[local-name()='observation']">
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<tr>
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<td class="text_plain">
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<table class="subGroup subGroup_border onehundred_percent">
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<tr valign="top">
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<td>
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<!-- observation entity -->
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<xsl:call-template name="observation" />
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</td>
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</tr>
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<tr>
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<td>
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<table class="onehundred_percent">
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<tr>
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<!-- measurement -->
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<xsl:for-each select="./*[local-name()='measurement']">
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<td>
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<xsl:call-template name="measurement" />
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</td>
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</xsl:for-each>
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</tr>
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</table>
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</td>
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</tr>
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</table>
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</td>
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</tr>
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</xsl:for-each><!-- end observation -->
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</xsl:if><!--end show all-->
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<tr class="searchresultsdivider">
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<td></td>
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</tr>
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</table>
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</xsl:template>
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<xsl:template name="annotationSearchResult">
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<table class="subGroup subGroup_border onehundred_percent">
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<tr>
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<th colspan="2">
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Annotation
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<a>
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<xsl:attribute name="href">
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<xsl:value-of select="$tripleURI"/><xsl:value-of select="./@id"/>
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</xsl:attribute>
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(<xsl:value-of select="./@id"/>)
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</a>
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<!-- stats -->
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<span id="annotationStats"></span>
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<script language="JavaScript">
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loadStats(
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'annotationStats',
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'<xsl:value-of select="./@id" />',
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'<xsl:value-of select="$contextURL" />/metacat',
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'<xsl:value-of select="$qformat" />');
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</script>
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</th>
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</tr>
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<tr>
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<xsl:variable name="mapCount">
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<xsl:value-of select="count(./*[local-name()='map'])"/>
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</xsl:variable>
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<td class="rowodd">
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Data Table (<xsl:value-of select="./@dataTable"/>):
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</td>
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<td class="roweven">
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<a>
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<xsl:attribute name="href">
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<xsl:value-of select="$tripleURI"/><xsl:value-of select="./@emlPackage"/>&displaymodule=entity&entitytype=dataTable&entityindex=<xsl:value-of select="number(./@dataTable)+1"/>&annotationId=<xsl:value-of select="./@id"/>
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</xsl:attribute>
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<xsl:for-each select="./*[local-name()='map']">
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<xsl:value-of select="./@attribute"/>
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<xsl:if test="position() != last()">, </xsl:if>
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</xsl:for-each>
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(<xsl:value-of select="$mapCount"/> attributes)
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</a>
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</td>
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</tr>
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<tr>
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<td class="rowodd">
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Data Package (<xsl:value-of select="./@emlPackage"/>):
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</td>
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<td class="roweven">
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<a>
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<xsl:attribute name="href">
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<xsl:value-of select="$tripleURI"/><xsl:value-of select="./@emlPackage"/>
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</xsl:attribute>
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View Metadata
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</a>
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<!-- stats -->
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<span id="emlStats"></span>
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<script language="JavaScript">
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loadStats(
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'emlStats',
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'<xsl:value-of select="./@emlPackage" />',
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'<xsl:value-of select="$contextURL" />/metacat',
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'<xsl:value-of select="$qformat" />');
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</script>
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</td>
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</tr>
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</table>
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</xsl:template>
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<xsl:template name="annotationSummary">
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<table class="subGroup subGroup_border">
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<tr>
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<th colspan="2">
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Details
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</th>
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</tr>
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<tr>
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<td class="rowodd">
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Annotation:
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</td>
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<td class="roweven">
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<a>
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<xsl:attribute name="href">
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<xsl:value-of select="$tripleURI"/><xsl:value-of select="./@id"/>
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</xsl:attribute>
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<xsl:value-of select="./@id"/>
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| 185 |
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</a>
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| 186 |
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|
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| 187 |
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<!-- stats -->
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<span id="annotationStats"></span>
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<script language="JavaScript">
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loadStats(
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'annotationStats',
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'<xsl:value-of select="./@id" />',
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'<xsl:value-of select="$contextURL" />/metacat',
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'<xsl:value-of select="$qformat" />');
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</script>
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</td>
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</tr>
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<tr>
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<td class="rowodd">
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Data Package:
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</td>
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<td class="roweven">
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<a>
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<xsl:attribute name="href">
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<xsl:value-of select="$tripleURI"/><xsl:value-of select="./@emlPackage"/>
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</xsl:attribute>
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<xsl:value-of select="./@emlPackage"/>
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</a>
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| 210 |
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|
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| 211 |
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<!-- stats -->
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<span id="emlStats"></span>
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<script language="JavaScript">
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loadStats(
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'emlStats',
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'<xsl:value-of select="./@emlPackage" />',
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'<xsl:value-of select="$contextURL" />/metacat',
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'<xsl:value-of select="$qformat" />');
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</script>
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</td>
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</tr>
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| 223 |
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<tr>
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| 224 |
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<td class="rowodd">
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| 225 |
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Data Table:
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| 226 |
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</td>
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| 227 |
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<td class="roweven">
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| 228 |
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<a>
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| 229 |
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<xsl:attribute name="href">
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<xsl:value-of select="$tripleURI"/><xsl:value-of select="./@emlPackage"/>&displaymodule=entity&entitytype=dataTable&entityindex=<xsl:value-of select="number(./@dataTable)+1"/>&annotationId=<xsl:value-of select="./@id"/>
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</xsl:attribute>
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| 232 |
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<xsl:value-of select="./@dataTable"/>
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| 233 |
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</a>
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| 234 |
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</td>
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| 235 |
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</tr>
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| 236 |
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</table>
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| 237 |
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</xsl:template>
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| 238 |
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| 239 |
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<xsl:template name="observation">
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| 240 |
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<table class="onehundred_percent">
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<tr>
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<th colspan="2">
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| 243 |
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Observation (<xsl:value-of select="./@label"/>)
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| 244 |
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</th>
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| 245 |
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</tr>
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| 246 |
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<tr>
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<td class="rowodd">
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| 248 |
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Entity:
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| 249 |
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</td>
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| 250 |
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<td class="roweven">
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| 251 |
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<p>
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| 252 |
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<xsl:attribute name="title">
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| 253 |
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<xsl:value-of select="fn:namespace-uri-for-prefix(substring-before(./*[local-name()='entity']/@id, ':'), .)"/>
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| 254 |
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<xsl:text>#</xsl:text>
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| 255 |
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<xsl:value-of select="substring-after(./*[local-name()='entity']/@id, ':')"/>
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| 256 |
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</xsl:attribute>
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| 257 |
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<xsl:value-of select="substring-after(./*[local-name()='entity']/@id, ':')"/>
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| 258 |
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</p>
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| 259 |
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</td>
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| 260 |
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</tr>
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| 261 |
|
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| 262 |
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<tr>
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| 263 |
|
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<td class="rowodd">
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| 264 |
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Ontology:
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| 265 |
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</td>
|
| 266 |
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<td class="roweven">
|
| 267 |
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<xsl:value-of select="fn:namespace-uri-for-prefix(substring-before(./*[local-name()='entity']/@id, ':'), .)"/>
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| 268 |
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</td>
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| 269 |
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</tr>
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| 270 |
|
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|
| 271 |
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</table>
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| 272 |
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| 273 |
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</xsl:template>
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| 274 |
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<xsl:template name="measurement">
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| 276 |
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<!-- measurement -->
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| 277 |
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<table class="subGroup subGroup_border onehundred_percent">
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| 278 |
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<tr>
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<th colspan="2">
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Measurement (<xsl:value-of select="./@label" />)
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| 281 |
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</th>
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| 282 |
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</tr>
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| 283 |
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<tr>
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| 284 |
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<td class="rowodd">
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| 285 |
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Column:
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| 286 |
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</td>
|
| 287 |
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<td class="roweven">
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| 288 |
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<xsl:variable name="columnkey">
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| 289 |
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<xsl:value-of select="concat(../../@id, @label)" />
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| 290 |
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</xsl:variable>
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| 291 |
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<xsl:for-each select="key('mapping', $columnkey )">
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| 292 |
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<xsl:value-of select="./@attribute" />
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| 293 |
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</xsl:for-each>
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| 294 |
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</td>
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| 295 |
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</tr>
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| 296 |
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<tr>
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| 297 |
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<td class="rowodd">
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| 298 |
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|
Characteristic[s]:
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| 299 |
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</td>
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| 300 |
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<td class="roweven">
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| 301 |
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<xsl:for-each select="./*[local-name()='characteristic']">
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| 302 |
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<span>
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| 303 |
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<xsl:attribute name="title">
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| 304 |
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<xsl:value-of select="fn:namespace-uri-for-prefix(substring-before(./@id, ':'), .)"/>
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| 305 |
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<xsl:text>#</xsl:text>
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| 306 |
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<xsl:value-of select="substring-after(./@id, ':')"/>
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| 307 |
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</xsl:attribute>
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| 308 |
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<xsl:value-of select="substring-after(./@id, ':')"/>
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| 309 |
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</span>
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| 310 |
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</xsl:for-each>
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| 311 |
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</td>
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| 312 |
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</tr>
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| 313 |
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<tr>
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| 314 |
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<td class="rowodd">
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| 315 |
|
|
Standard:
|
| 316 |
|
|
</td>
|
| 317 |
|
|
<td class="roweven">
|
| 318 |
|
|
<span>
|
| 319 |
|
|
<xsl:attribute name="title">
|
| 320 |
|
|
<xsl:value-of select="fn:namespace-uri-for-prefix(substring-before(./*[local-name()='standard']/@id, ':'), .)"/>
|
| 321 |
|
|
<xsl:text>#</xsl:text>
|
| 322 |
|
|
<xsl:value-of select="substring-after(./*[local-name()='standard']/@id, ':')"/>
|
| 323 |
|
|
</xsl:attribute>
|
| 324 |
|
|
<xsl:value-of select="substring-after(./*[local-name()='standard']/@id, ':')"/>
|
| 325 |
|
|
</span>
|
| 326 |
|
|
</td>
|
| 327 |
|
|
</tr>
|
| 328 |
|
|
<tr>
|
| 329 |
|
|
<td class="rowodd">
|
| 330 |
|
|
Protocol:
|
| 331 |
|
|
</td>
|
| 332 |
|
|
<td class="roweven">
|
| 333 |
|
|
<span>
|
| 334 |
|
|
<xsl:attribute name="title">
|
| 335 |
|
|
<xsl:value-of select="fn:namespace-uri-for-prefix(substring-before(./*[local-name()='protocol']/@id, ':'), .)"/>
|
| 336 |
|
|
<xsl:text>#</xsl:text>
|
| 337 |
5721
|
leinfelder
|
<xsl:value-of select="substring-after(./*[local-name()='protocol']/@id, ':')"/>
|
| 338 |
5728
|
leinfelder
|
</xsl:attribute>
|
| 339 |
|
|
<xsl:value-of select="substring-after(./*[local-name()='protocol']/@id, ':')"/>
|
| 340 |
|
|
</span>
|
| 341 |
|
|
</td>
|
| 342 |
|
|
</tr>
|
| 343 |
|
|
</table>
|
| 344 |
5721
|
leinfelder
|
|
| 345 |
|
|
</xsl:template>
|
| 346 |
|
|
|
| 347 |
|
|
<xsl:template name="attributeDetail">
|
| 348 |
|
|
<xsl:param name="attributeLabel"/>
|
| 349 |
|
|
<!-- look up the attribute mapping for the given label -->
|
| 350 |
5727
|
leinfelder
|
<xsl:for-each select="key('attributes', concat(//*[local-name()='annotation']/@id, $attributeLabel))">
|
| 351 |
5721
|
leinfelder
|
<!-- get the <measurement> node using this label -->
|
| 352 |
5726
|
leinfelder
|
<table>
|
| 353 |
5721
|
leinfelder
|
<tr>
|
| 354 |
5727
|
leinfelder
|
<xsl:for-each select="key('measurements', concat(//*[local-name()='annotation']/@id, ./@measurement))">
|
| 355 |
5728
|
leinfelder
|
<td>
|
| 356 |
|
|
<xsl:call-template name="measurement"/>
|
| 357 |
|
|
</td>
|
| 358 |
5721
|
leinfelder
|
</xsl:for-each>
|
| 359 |
|
|
</tr>
|
| 360 |
|
|
</table>
|
| 361 |
|
|
</xsl:for-each>
|
| 362 |
|
|
</xsl:template>
|
| 363 |
5536
|
leinfelder
|
|
| 364 |
|
|
</xsl:stylesheet>
|