Revision 5917
Added by berkley about 13 years ago
| test/edu/ucsb/nceas/metacat/dataone/CrudServiceTest.java | ||
|---|---|---|
| 93 | 93 |
public static Test suite() |
| 94 | 94 |
{
|
| 95 | 95 |
TestSuite suite = new TestSuite(); |
| 96 |
suite.addTest(new CrudServiceTest("initialize"));
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|
| 97 |
suite.addTest(new CrudServiceTest("testSingletonAccessor"));
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|
| 98 |
suite.addTest(new CrudServiceTest("testCreateAndGet"));
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|
| 99 |
suite.addTest(new CrudServiceTest("testGetSystemMetadata"));
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|
| 100 |
suite.addTest(new CrudServiceTest("testUpdate"));
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|
| 96 |
// suite.addTest(new CrudServiceTest("initialize"));
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|
| 97 |
// suite.addTest(new CrudServiceTest("testSingletonAccessor"));
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|
| 98 |
// suite.addTest(new CrudServiceTest("testCreateAndGet"));
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|
| 99 |
// suite.addTest(new CrudServiceTest("testGetSystemMetadata"));
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|
| 100 |
// suite.addTest(new CrudServiceTest("testUpdate"));
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|
| 101 | 101 |
suite.addTest(new CrudServiceTest("testListObjects"));
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| 102 |
suite.addTest(new CrudServiceTest("testAccessControl"));
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|
| 103 |
suite.addTest(new CrudServiceTest("testGetLogRecords"));
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| 104 |
suite.addTest(new CrudServiceTest("testChecksumError"));
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| 105 |
suite.addTest(new CrudServiceTest("testPublicAccess"));
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| 106 |
suite.addTest(new CrudServiceTest("testFailedCreate"));
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| 107 |
suite.addTest(new CrudServiceTest("testChecksum"));
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| 108 |
suite.addTest(new CrudServiceTest("testDescribe"));
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| 109 |
suite.addTest(new CrudServiceTest("testDelete"));
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| 110 |
suite.addTest(new CrudServiceTest("testSemiColonsInIdentifiers"));
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| 102 |
// suite.addTest(new CrudServiceTest("testAccessControl"));
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| 103 |
// suite.addTest(new CrudServiceTest("testGetLogRecords"));
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| 104 |
// suite.addTest(new CrudServiceTest("testChecksumError"));
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| 105 |
// suite.addTest(new CrudServiceTest("testPublicAccess"));
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| 106 |
// suite.addTest(new CrudServiceTest("testFailedCreate"));
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| 107 |
// suite.addTest(new CrudServiceTest("testChecksum"));
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| 108 |
// suite.addTest(new CrudServiceTest("testDescribe"));
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| 109 |
// suite.addTest(new CrudServiceTest("testDelete"));
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| 110 |
// suite.addTest(new CrudServiceTest("testSemiColonsInIdentifiers"));
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| 111 | 111 |
//suite.addTest(new CrudServiceTest("testGenerateMissingSystemMetadata"));
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| 112 | 112 |
return suite; |
| 113 | 113 |
} |
| ... | ... | |
| 608 | 608 |
ObjectList list8 = cs.listObjects(token, d1, d6, null, false, 2, 2); |
| 609 | 609 |
assertTrue(list8.getCount() == 2); |
| 610 | 610 |
assertTrue(list8.getStart() == 2); |
| 611 |
assertTrue(list8.getTotal() == 4);
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| 611 |
assertTrue(list8.getTotal() == 5);
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| 612 | 612 |
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| 613 |
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| 613 | 614 |
} |
| 614 | 615 |
catch(Exception e) |
| 615 | 616 |
{
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| src/xmltables-oracle.sql | ||
|---|---|---|
| 410 | 410 |
origin_member_node VARCHAR2(250), --the member node where the document was first uploaded |
| 411 | 411 |
authoritive_member_node VARCHAR2(250), --the member node that currently controls the document |
| 412 | 412 |
date_modified DATE, -- the last date/time that the file was changed |
| 413 |
submitter VARCHAR2(256) -- the user who originally submitted the doc |
|
| 413 |
submitter VARCHAR2(256), -- the user who originally submitted the doc |
|
| 414 |
object_format VARCHAR2(256), --the format of the object |
|
| 415 |
size VARCHAR2(256) --the size of the object |
|
| 414 | 416 |
) |
| 415 | 417 |
|
| 416 | 418 |
/* |
| src/upgrade-db-to-1.10.0-postgres.sql | ||
|---|---|---|
| 12 | 12 |
authoritive_member_node VARCHAR(250), --the member node that currently controls the document |
| 13 | 13 |
date_modified TIMESTAMP, -- the last date/time that the file was changed |
| 14 | 14 |
submitter VARCHAR(256), -- the user who originally submitted the doc |
| 15 |
object_format VARCHAR(256), --the format of the object |
|
| 16 |
size VARCHAR(256), --the size of the object |
|
| 15 | 17 |
CONSTRAINT systemMetadata_pk PRIMARY KEY (guid) |
| 16 | 18 |
); |
| 17 | 19 |
|
| src/xmltables-postgres.sql | ||
|---|---|---|
| 300 | 300 |
authoritive_member_node VARCHAR(250), --the member node that currently controls the document |
| 301 | 301 |
date_modified TIMESTAMP, -- the last date/time that the file was changed |
| 302 | 302 |
submitter VARCHAR(256), -- the user who originally submitted the doc |
| 303 |
object_format VARCHAR(256), --the format of the object |
|
| 304 |
size VARCHAR(256), --the size of the object |
|
| 303 | 305 |
CONSTRAINT systemMetadata_pk PRIMARY KEY (guid) |
| 304 | 306 |
); |
| 305 | 307 |
|
| src/upgrade-db-to-1.10.0-oracle.sql | ||
|---|---|---|
| 12 | 12 |
origin_member_node VARCHAR2(250), --the member node where the document was first uploaded |
| 13 | 13 |
authoritive_member_node VARCHAR2(250), --the member node that currently controls the document |
| 14 | 14 |
date_modified DATE, -- the last date/time that the file was changed |
| 15 |
submitter VARCHAR2(256) -- the user who originally submitted the doc |
|
| 15 |
submitter VARCHAR2(256), -- the user who originally submitted the doc |
|
| 16 |
object_format VARCHAR2(256), --the format of the object |
|
| 17 |
size VARCHAR2(256) --the size of the object |
|
| 16 | 18 |
) |
| 17 | 19 |
|
| 18 | 20 |
CREATE TABLE identifier ( |
| src/edu/ucsb/nceas/metacat/IdentifierManager.java | ||
|---|---|---|
| 119 | 119 |
} |
| 120 | 120 |
Hashtable<String, String> h = new Hashtable<String, String>(); |
| 121 | 121 |
String sql = "select guid, date_uploaded, rights_holder, checksum, checksum_algorithm, " + |
| 122 |
"origin_member_node, authoritative_member_node, date_modified, submitter " + |
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| 122 |
"origin_member_node, authoritative_member_node, date_modified, submitter, object_format " +
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| 123 | 123 |
"from systemmetadata where docid = ?"; |
| 124 | 124 |
DBConnection dbConn = null; |
| 125 | 125 |
int serialNumber = -1; |
| ... | ... | |
| 144 | 144 |
String authoritativeMemberNode = rs.getString(7); |
| 145 | 145 |
Timestamp dateModified = rs.getTimestamp(8); |
| 146 | 146 |
String submitter = rs.getString(9); |
| 147 |
String objectFormat = rs.getString(10); |
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| 148 |
long size = new Long(rs.getString(11)).longValue(); |
|
| 147 | 149 |
|
| 148 | 150 |
h.put("guid", guid);
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| 149 | 151 |
h.put("date_uploaded", new Long(dateUploaded.getTime()).toString());
|
| ... | ... | |
| 154 | 156 |
h.put("authoritative_member_node", authoritativeMemberNode);
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| 155 | 157 |
h.put("date_modified", new Long(dateModified.getTime()).toString());
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| 156 | 158 |
h.put("submitter", submitter);
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| 159 |
h.put("object_format", objectFormat);
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| 160 |
h.put("size", new Long(size).toString());
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| 157 | 161 |
|
| 158 | 162 |
stmt.close(); |
| 159 | 163 |
} |
| ... | ... | |
| 678 | 682 |
|
| 679 | 683 |
public void insertAdditionalSystemMetadataFields(long dateUploaded, String rightsHolder, |
| 680 | 684 |
String checksum, String checksumAlgorithm, String originMemberNode, |
| 681 |
String authoritativeMemberNode, long modifiedDate, String submitter, String guid) |
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| 685 |
String authoritativeMemberNode, long modifiedDate, String submitter, |
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| 686 |
String guid, String objectFormat, long size) |
|
| 682 | 687 |
{
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| 683 | 688 |
DBConnection dbConn = null; |
| 684 | 689 |
int serialNumber = -1; |
| ... | ... | |
| 691 | 696 |
// Execute the insert statement |
| 692 | 697 |
String query = "update " + TYPE_SYSTEM_METADATA + |
| 693 | 698 |
" set (date_uploaded, rights_holder, checksum, checksum_algorithm, " + |
| 694 |
"origin_member_node, authoritive_member_node, date_modified, submitter) " + |
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| 695 |
"= (?, ?, ?, ?, ?, ?, ?, ?) where guid = ?"; |
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| 699 |
"origin_member_node, authoritive_member_node, date_modified, " + |
|
| 700 |
"submitter, object_format, size) " + |
|
| 701 |
"= (?, ?, ?, ?, ?, ?, ?, ?, ?, ?) where guid = ?"; |
|
| 696 | 702 |
PreparedStatement stmt = dbConn.prepareStatement(query); |
| 697 | 703 |
|
| 698 | 704 |
//data values |
| ... | ... | |
| 704 | 710 |
stmt.setString(6, authoritativeMemberNode); |
| 705 | 711 |
stmt.setTimestamp(7, new java.sql.Timestamp(modifiedDate)); |
| 706 | 712 |
stmt.setString(8, submitter); |
| 713 |
stmt.setString(9, objectFormat); |
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| 714 |
stmt.setString(10, new Long(size).toString()); |
|
| 707 | 715 |
//where clause |
| 708 |
stmt.setString(9, guid);
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| 716 |
stmt.setString(11, guid);
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| 709 | 717 |
System.out.println("stmt: " + stmt.toString());
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| 710 | 718 |
//execute |
| 711 | 719 |
int rows = stmt.executeUpdate(); |
| ... | ... | |
| 740 | 748 |
sm.getAuthoritativeMemberNode().getValue(), |
| 741 | 749 |
sm.getDateSysMetadataModified().getTime(), |
| 742 | 750 |
sm.getSubmitter().getValue(), |
| 743 |
sm.getIdentifier().getValue()); |
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| 751 |
sm.getIdentifier().getValue(), |
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| 752 |
sm.getObjectFormat().toString(), |
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| 753 |
sm.getSize()); |
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| 744 | 754 |
} |
| 745 | 755 |
|
| 746 | 756 |
/** |
| ... | ... | |
| 815 | 825 |
{
|
| 816 | 826 |
String sql = "select guid, date_uploaded, rights_holder, checksum, " + |
| 817 | 827 |
"checksum_algorithm, origin_member_node, authoritive_member_node, " + |
| 818 |
"date_modified, submitter, xml_documents.doctype from systemmetadata, " + |
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| 819 |
"xml_documents where xml_documents.docid in " + |
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| 820 |
"(select docid from identifier where guid = systemmetadata.guid)"; |
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| 828 |
"date_modified, submitter, object_format, size from systemmetadata"; |
|
| 821 | 829 |
|
| 822 | 830 |
boolean f1 = false; |
| 823 | 831 |
boolean f2 = false; |
| ... | ... | |
| 825 | 833 |
|
| 826 | 834 |
if(startTime != null) |
| 827 | 835 |
{
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| 828 |
sql += " and systemmetadata.date_modified > ?";
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| 836 |
sql += " where systemmetadata.date_modified > ?";
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| 829 | 837 |
f1 = true; |
| 830 | 838 |
} |
| 831 | 839 |
|
| 832 | 840 |
if(endTime != null) |
| 833 | 841 |
{
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| 834 |
sql += " and systemmetadata.date_modified < ?"; |
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| 842 |
if(!f1) |
|
| 843 |
{
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| 844 |
sql += " where systemmetadata.date_modified < ?"; |
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| 845 |
} |
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| 846 |
else |
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| 847 |
{
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| 848 |
sql += " and systemmetadata.date_modified < ?"; |
|
| 849 |
} |
|
| 835 | 850 |
f2 = true; |
| 836 | 851 |
} |
| 837 | 852 |
|
| 838 | 853 |
if(objectFormat != null) |
| 839 | 854 |
{
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| 840 |
sql += " and xml_documents.doctype = ?"; |
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| 855 |
if(!f1 && !f2) |
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| 856 |
{
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| 857 |
sql += " where object_format = ?"; |
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| 858 |
} |
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| 859 |
else |
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| 860 |
{
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| 861 |
sql += " and object_format = ?"; |
|
| 862 |
} |
|
| 841 | 863 |
f3 = true; |
| 842 | 864 |
} |
| 843 | 865 |
|
| 844 | 866 |
if(replicaStatus) |
| 845 | 867 |
{
|
| 846 | 868 |
String currentNodeId = PropertyService.getInstance().getProperty("dataone.memberNodeId");
|
| 847 |
sql += " and authoritive_member_node != '" + currentNodeId.trim() + "'"; |
|
| 869 |
if(!f1 && !f2 && !f3) |
|
| 870 |
{
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|
| 871 |
sql += " where authoritive_member_node != '" + currentNodeId.trim() + "'"; |
|
| 872 |
} |
|
| 873 |
else |
|
| 874 |
{
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| 875 |
sql += " and authoritive_member_node != '" + currentNodeId.trim() + "'"; |
|
| 876 |
} |
|
| 848 | 877 |
} |
| 849 | 878 |
|
| 850 | 879 |
DBConnection dbConn = DBConnectionPool.getDBConnection("IdentifierManager.createMapping");
|
| ... | ... | |
| 888 | 917 |
//System.out.println("LISTOBJECTS QUERY: " + stmt.toString());
|
| 889 | 918 |
|
| 890 | 919 |
ResultSet rs = stmt.executeQuery(); |
| 891 |
for(int i=0; i<start - 1; i++)
|
|
| 920 |
for(int i=0; i<start; i++) |
|
| 892 | 921 |
{
|
| 893 |
rs.next(); |
|
| 922 |
if(rs.next()) |
|
| 923 |
{
|
|
| 924 |
total++; |
|
| 925 |
} |
|
| 926 |
else |
|
| 927 |
{
|
|
| 928 |
break; |
|
| 929 |
} |
|
| 894 | 930 |
} |
| 931 |
|
|
| 895 | 932 |
int countIndex = 0; |
| 896 | 933 |
|
| 897 | 934 |
while(rs.next()) |
| ... | ... | |
| 912 | 949 |
Timestamp dateModified = rs.getTimestamp(8); |
| 913 | 950 |
//String submitter = rs.getString(9); |
| 914 | 951 |
String format = rs.getString(10); |
| 952 |
String sz = rs.getString(11); |
|
| 953 |
long size = 0; |
|
| 954 |
if(sz != null && !sz.trim().equals(""))
|
|
| 955 |
{
|
|
| 956 |
size = new Long(rs.getString(11)).longValue(); |
|
| 957 |
} |
|
| 915 | 958 |
|
| 916 | 959 |
ObjectInfo oi = new ObjectInfo(); |
| 917 | 960 |
|
| ... | ... | |
| 933 | 976 |
} |
| 934 | 977 |
else |
| 935 | 978 |
{ //if there is no object format, just default to text/plain
|
| 936 |
oi.setObjectFormat(ObjectFormat.TEXT_PLAIN);
|
|
| 979 |
oi.setObjectFormat(ObjectFormat.OCTET_STREAM);
|
|
| 937 | 980 |
} |
| 981 |
|
|
| 982 |
oi.setSize(size); |
|
| 938 | 983 |
|
| 939 | 984 |
ol.addObjectInfo(oi); |
| 940 | 985 |
countIndex++; |
| ... | ... | |
| 951 | 996 |
System.out.println("Error querying system metadata: " + e.getMessage());
|
| 952 | 997 |
} |
| 953 | 998 |
|
| 954 |
System.out.println("listObjects total: " + total);
|
|
| 955 | 999 |
ol.setStart(start); |
| 956 | 1000 |
ol.setCount(count); |
| 957 | 1001 |
ol.setTotal(total); |
| src/edu/ucsb/nceas/metacat/replication/ReplicationHandler.java | ||
|---|---|---|
| 438 | 438 |
docinfoHash.get("authoritative_member_node"),
|
| 439 | 439 |
dateModifiedLong.longValue(), |
| 440 | 440 |
docinfoHash.get("submitter"),
|
| 441 |
docinfoHash.get("guid"));
|
|
| 441 |
docinfoHash.get("guid"),
|
|
| 442 |
docinfoHash.get("objectFormat"),
|
|
| 443 |
new Long(docinfoHash.get("size")).longValue());
|
|
| 442 | 444 |
} |
| 443 | 445 |
else |
| 444 | 446 |
{
|
Also available in: Unified diff
fixed bugs in listObjects