Revision 6000
Added by ben leinfelder over 13 years ago
src/edu/ucsb/nceas/metacat/dataquery/ConfigurableEcogridEndPoint.java | ||
---|---|---|
1 |
/** |
|
2 |
* '$RCSfile: ConfigurableEcogridEndPoint.java,v $' |
|
3 |
* |
|
4 |
* '$Author: leinfelder $' |
|
5 |
* '$Date: 2008/06/20 17:47:12 $' |
|
6 |
* '$Revision: 1.1 $' |
|
7 |
* |
|
8 |
* For Details: http://ecoinformatics.org |
|
9 |
* |
|
10 |
* Copyright (c) 2007 The Regents of the University of California. |
|
11 |
* All rights reserved. |
|
12 |
* |
|
13 |
* Permission is hereby granted, without written agreement and without |
|
14 |
* license or royalty fees, to use, copy, modify, and distribute this |
|
15 |
* software and its documentation for any purpose, provided that the |
|
16 |
* above copyright notice and the following two paragraphs appear in |
|
17 |
* all copies of this software. |
|
18 |
* |
|
19 |
* IN NO EVENT SHALL THE UNIVERSITY OF CALIFORNIA BE LIABLE TO ANY PARTY |
|
20 |
* FOR DIRECT, INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES |
|
21 |
* ARISING OUT OF THE USE OF THIS SOFTWARE AND ITS DOCUMENTATION, EVEN |
|
22 |
* IF THE UNIVERSITY OF CALIFORNIA HAS BEEN ADVISED OF THE POSSIBILITY |
|
23 |
* OF SUCH DAMAGE. |
|
24 |
* |
|
25 |
* THE UNIVERSITY OF CALIFORNIA SPECIFICALLY DISCLAIMS ANY WARRANTIES, |
|
26 |
* INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF |
|
27 |
* MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE SOFTWARE |
|
28 |
* PROVIDED HEREUNDER IS ON AN "AS IS" BASIS, AND THE UNIVERSITY |
|
29 |
* OF CALIFORNIA HAS NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, |
|
30 |
* UPDATES, ENHANCEMENTS, OR MODIFICATIONS. |
|
31 |
*/ |
|
32 |
package edu.ucsb.nceas.metacat.dataquery; |
|
33 |
|
|
34 |
import org.ecoinformatics.datamanager.download.EcogridEndPointInterface; |
|
35 |
|
|
36 |
import edu.ucsb.nceas.metacat.properties.PropertyService; |
|
37 |
import edu.ucsb.nceas.utilities.PropertyNotFoundException; |
|
38 |
|
|
39 |
/** |
|
40 |
* This class implements EcogridEndPointInterface and is configurable using a properties file. |
|
41 |
* Should be useful for switching to remote endpoints etc. |
|
42 |
* |
|
43 |
* @author leinfelder |
|
44 |
* |
|
45 |
*/ |
|
46 |
public class ConfigurableEcogridEndPoint implements EcogridEndPointInterface |
|
47 |
{ |
|
48 |
|
|
49 |
private String metacatEcogridEndPoint = null; |
|
50 |
private String metacatEcogridAuthEndPoint = null; |
|
51 |
private String metacatEcogridPutEndPoint = null; |
|
52 |
private String metacatEcogridIdentifierEndPoint = null; |
|
53 |
private String srbEcogridEndPoint = null; |
|
54 |
private String srbMachineName = null; |
|
55 |
|
|
56 |
protected String baseURL = null; |
|
57 |
|
|
58 |
public ConfigurableEcogridEndPoint() { |
|
59 |
if (!loadProperties()) { |
|
60 |
try { |
|
61 |
//use values from server where deployed |
|
62 |
baseURL = |
|
63 |
"http://" |
|
64 |
+ PropertyService.getProperty("server.name") |
|
65 |
+ ":" |
|
66 |
+ PropertyService.getProperty("server.httpPort") |
|
67 |
+ "/" |
|
68 |
+ PropertyService.getProperty("application.context") |
|
69 |
+ "/services/"; |
|
70 |
metacatEcogridEndPoint = baseURL + "QueryService"; |
|
71 |
metacatEcogridAuthEndPoint = baseURL + "AuthenticationService"; |
|
72 |
metacatEcogridPutEndPoint = baseURL + "PutService"; |
|
73 |
metacatEcogridIdentifierEndPoint = baseURL + "IdentificationService"; |
|
74 |
} catch (PropertyNotFoundException e) { |
|
75 |
//we are SOL now |
|
76 |
e.printStackTrace(); |
|
77 |
} |
|
78 |
} |
|
79 |
} |
|
80 |
|
|
81 |
private boolean loadProperties() { |
|
82 |
try { |
|
83 |
metacatEcogridEndPoint = PropertyService.getProperty("datamanager.endpoint.query"); |
|
84 |
metacatEcogridAuthEndPoint = PropertyService.getProperty("datamanager.endpoint.authentication"); |
|
85 |
metacatEcogridPutEndPoint = PropertyService.getProperty("datamanager.endpoint.put"); |
|
86 |
metacatEcogridIdentifierEndPoint = PropertyService.getProperty("datamanager.endpoint.identifier"); |
|
87 |
srbEcogridEndPoint = PropertyService.getProperty("datamanager.srb.endpoint"); |
|
88 |
srbMachineName = PropertyService.getProperty("datamanager.srb.machinename"); |
|
89 |
} catch (PropertyNotFoundException e) { |
|
90 |
//e.printStackTrace(); |
|
91 |
return false; |
|
92 |
} |
|
93 |
if (metacatEcogridEndPoint == null || metacatEcogridEndPoint.length() == 0) { |
|
94 |
return false; |
|
95 |
} |
|
96 |
return true; |
|
97 |
} |
|
98 |
/** |
|
99 |
* Gets the end point which Metacat implements ecogrid interface. |
|
100 |
* This end point will be used to handle ecogrid protocol |
|
101 |
* |
|
102 |
* @return end point url string |
|
103 |
*/ |
|
104 |
public String getMetacatEcogridEndPoint() |
|
105 |
{ |
|
106 |
return metacatEcogridEndPoint; |
|
107 |
} |
|
108 |
|
|
109 |
public String getMetacatEcogridAuthEndPoint() |
|
110 |
{ |
|
111 |
return metacatEcogridAuthEndPoint; |
|
112 |
} |
|
113 |
|
|
114 |
public String getMetacatEcogridPutEndPoint() |
|
115 |
{ |
|
116 |
return metacatEcogridPutEndPoint; |
|
117 |
} |
|
118 |
|
|
119 |
public String getMetacatEcogridIdentifierEndPoint() |
|
120 |
{ |
|
121 |
return metacatEcogridIdentifierEndPoint; |
|
122 |
} |
|
123 |
|
|
124 |
|
|
125 |
/** |
|
126 |
* Gets the end point which SRB implements ecogrid interface. |
|
127 |
* This end point will be used to handle srb protocol. |
|
128 |
* |
|
129 |
* @return end point url string |
|
130 |
*/ |
|
131 |
public String getSRBEcogridEndPoint() |
|
132 |
{ |
|
133 |
return srbEcogridEndPoint; |
|
134 |
} |
|
135 |
|
|
136 |
|
|
137 |
/** |
|
138 |
* Gets the machine name which srb protocol will be used. |
|
139 |
* The default value for this class is "srb-mcat.sdsc.edu". |
|
140 |
* |
|
141 |
* @return the machine name of srb server |
|
142 |
*/ |
|
143 |
public String getSRBMachineName() |
|
144 |
{ |
|
145 |
return srbMachineName; |
|
146 |
} |
|
147 |
|
|
148 |
} |
|
149 |
|
src/edu/ucsb/nceas/metacat/dataquery/ConfigurableAuthenticatedEcogridEndPoint.java | ||
---|---|---|
1 |
/** |
|
2 |
* '$RCSfile: ConfigurableEcogridEndPoint.java,v $' |
|
3 |
* |
|
4 |
* '$Author: leinfelder $' |
|
5 |
* '$Date: 2008/06/20 17:47:12 $' |
|
6 |
* '$Revision: 1.1 $' |
|
7 |
* |
|
8 |
* For Details: http://ecoinformatics.org |
|
9 |
* |
|
10 |
* Copyright (c) 2007 The Regents of the University of California. |
|
11 |
* All rights reserved. |
|
12 |
* |
|
13 |
* Permission is hereby granted, without written agreement and without |
|
14 |
* license or royalty fees, to use, copy, modify, and distribute this |
|
15 |
* software and its documentation for any purpose, provided that the |
|
16 |
* above copyright notice and the following two paragraphs appear in |
|
17 |
* all copies of this software. |
|
18 |
* |
|
19 |
* IN NO EVENT SHALL THE UNIVERSITY OF CALIFORNIA BE LIABLE TO ANY PARTY |
|
20 |
* FOR DIRECT, INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES |
|
21 |
* ARISING OUT OF THE USE OF THIS SOFTWARE AND ITS DOCUMENTATION, EVEN |
|
22 |
* IF THE UNIVERSITY OF CALIFORNIA HAS BEEN ADVISED OF THE POSSIBILITY |
|
23 |
* OF SUCH DAMAGE. |
|
24 |
* |
|
25 |
* THE UNIVERSITY OF CALIFORNIA SPECIFICALLY DISCLAIMS ANY WARRANTIES, |
|
26 |
* INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF |
|
27 |
* MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE SOFTWARE |
|
28 |
* PROVIDED HEREUNDER IS ON AN "AS IS" BASIS, AND THE UNIVERSITY |
|
29 |
* OF CALIFORNIA HAS NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, |
|
30 |
* UPDATES, ENHANCEMENTS, OR MODIFICATIONS. |
|
31 |
*/ |
|
32 |
package edu.ucsb.nceas.metacat.dataquery; |
|
33 |
|
|
34 |
import org.ecoinformatics.datamanager.download.AuthenticatedEcogridEndPointInterface; |
|
35 |
|
|
36 |
import edu.ucsb.nceas.metacat.properties.PropertyService; |
|
37 |
import edu.ucsb.nceas.utilities.PropertyNotFoundException; |
|
38 |
|
|
39 |
/** |
|
40 |
* This class implements AuthenticatedEcogridEndPointInterface |
|
41 |
* and is configurable using the properties file. |
|
42 |
* Useful for switching to remote endpoints etc. |
|
43 |
* |
|
44 |
* @author leinfelder |
|
45 |
* |
|
46 |
*/ |
|
47 |
public class ConfigurableAuthenticatedEcogridEndPoint |
|
48 |
extends ConfigurableEcogridEndPoint implements AuthenticatedEcogridEndPointInterface { |
|
49 |
|
|
50 |
private String metacatAuthenticatedEcogridEndPoint = null; |
|
51 |
private String sessionId = null; |
|
52 |
|
|
53 |
public ConfigurableAuthenticatedEcogridEndPoint() { |
|
54 |
super(); |
|
55 |
if (!loadProperties()) { |
|
56 |
metacatAuthenticatedEcogridEndPoint = baseURL + "AuthenticatedQueryService"; |
|
57 |
} |
|
58 |
} |
|
59 |
|
|
60 |
public ConfigurableAuthenticatedEcogridEndPoint(String sessionId) { |
|
61 |
this(); |
|
62 |
this.sessionId = sessionId; |
|
63 |
} |
|
64 |
|
|
65 |
private boolean loadProperties() { |
|
66 |
try { |
|
67 |
metacatAuthenticatedEcogridEndPoint = PropertyService.getProperty("datamanager.endpoint.authenticatedquery"); |
|
68 |
} catch (PropertyNotFoundException e) { |
|
69 |
//e.printStackTrace(); |
|
70 |
return false; |
|
71 |
} |
|
72 |
if (metacatAuthenticatedEcogridEndPoint == null || metacatAuthenticatedEcogridEndPoint.length() == 0) { |
|
73 |
return false; |
|
74 |
} |
|
75 |
return true; |
|
76 |
} |
|
77 |
|
|
78 |
/** |
|
79 |
* Gets the end point which Metacat implements authenticated ecogrid interface. |
|
80 |
* This end point will be used to handle ecogrid protocol |
|
81 |
* |
|
82 |
* @return end point url string |
|
83 |
*/ |
|
84 |
public String getMetacatAuthenticatedEcogridEndPoint() |
|
85 |
{ |
|
86 |
return metacatAuthenticatedEcogridEndPoint; |
|
87 |
} |
|
88 |
|
|
89 |
public String getSessionId() |
|
90 |
{ |
|
91 |
return sessionId; |
|
92 |
} |
|
93 |
|
|
94 |
public void setSessionId(String id) { |
|
95 |
sessionId = id; |
|
96 |
} |
|
97 |
|
|
98 |
} |
|
99 |
|
src/edu/ucsb/nceas/metacat/dataquery/DatabaseConnectionPoolFactory.java | ||
---|---|---|
1 |
/** |
|
2 |
* '$RCSfile: DatabaseConnectionPoolFactory.java,v $' |
|
3 |
* |
|
4 |
* '$Author: leinfelder $' |
|
5 |
* '$Date: 2007/10/05 21:10:17 $' |
|
6 |
* '$Revision: 1.1 $' |
|
7 |
* |
|
8 |
* For Details: http://kepler.ecoinformatics.org |
|
9 |
* |
|
10 |
* Copyright (c) 2003 The Regents of the University of California. |
|
11 |
* All rights reserved. |
|
12 |
* |
|
13 |
* Permission is hereby granted, without written agreement and without |
|
14 |
* license or royalty fees, to use, copy, modify, and distribute this |
|
15 |
* software and its documentation for any purpose, provided that the |
|
16 |
* above copyright notice and the following two paragraphs appear in |
|
17 |
* all copies of this software. |
|
18 |
* |
|
19 |
* IN NO EVENT SHALL THE UNIVERSITY OF CALIFORNIA BE LIABLE TO ANY PARTY |
|
20 |
* FOR DIRECT, INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES |
|
21 |
* ARISING OUT OF THE USE OF THIS SOFTWARE AND ITS DOCUMENTATION, EVEN |
|
22 |
* IF THE UNIVERSITY OF CALIFORNIA HAS BEEN ADVISED OF THE POSSIBILITY |
|
23 |
* OF SUCH DAMAGE. |
|
24 |
* |
|
25 |
* THE UNIVERSITY OF CALIFORNIA SPECIFICALLY DISCLAIMS ANY WARRANTIES, |
|
26 |
* INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF |
|
27 |
* MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE SOFTWARE |
|
28 |
* PROVIDED HEREUNDER IS ON AN "AS IS" BASIS, AND THE UNIVERSITY |
|
29 |
* OF CALIFORNIA HAS NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, |
|
30 |
* UPDATES, ENHANCEMENTS, OR MODIFICATIONS. |
|
31 |
*/ |
|
32 |
package edu.ucsb.nceas.metacat.dataquery; |
|
33 |
|
|
34 |
import edu.ucsb.nceas.metacat.properties.PropertyService; |
|
35 |
|
|
36 |
import java.sql.Connection; |
|
37 |
import java.sql.SQLException; |
|
38 |
|
|
39 |
import org.apache.commons.logging.Log; |
|
40 |
import org.apache.commons.logging.LogFactory; |
|
41 |
import org.ecoinformatics.datamanager.database.ConnectionNotAvailableException; |
|
42 |
import org.ecoinformatics.datamanager.database.DatabaseConnectionPoolInterface; |
|
43 |
|
|
44 |
/** |
|
45 |
* This class provides an implementation of DataConnetionPoolInterface |
|
46 |
* Implementation and database information for this class will be read from property file. |
|
47 |
* |
|
48 |
* @author leinfelder |
|
49 |
* |
|
50 |
*/ |
|
51 |
public class DatabaseConnectionPoolFactory { |
|
52 |
|
|
53 |
public static Log log = LogFactory.getLog(DatabaseConnectionPoolFactory.class); |
|
54 |
|
|
55 |
private static String implementationClass = null; |
|
56 |
|
|
57 |
static { |
|
58 |
loadOptions(); |
|
59 |
} |
|
60 |
|
|
61 |
/** |
|
62 |
* Constructor. Loading database parameter from property file |
|
63 |
* |
|
64 |
*/ |
|
65 |
public DatabaseConnectionPoolFactory() { |
|
66 |
} |
|
67 |
|
|
68 |
/** |
|
69 |
* Loads Data Manager options from a configuration file. |
|
70 |
*/ |
|
71 |
private static void loadOptions() { |
|
72 |
try { |
|
73 |
implementationClass = PropertyService.getProperty("datamanager.implementation"); |
|
74 |
} |
|
75 |
catch (Exception e) { |
|
76 |
log.error("Error in loading options: " + e.getMessage()); |
|
77 |
} |
|
78 |
} |
|
79 |
|
|
80 |
public static DatabaseConnectionPoolInterface getDatabaseConnectionPoolInterface() { |
|
81 |
DatabaseConnectionPoolInterface instance = null; |
|
82 |
try { |
|
83 |
instance = |
|
84 |
(DatabaseConnectionPoolInterface) Class.forName(implementationClass).newInstance(); |
|
85 |
} catch (Exception e) { |
|
86 |
log.error(e.getMessage() |
|
87 |
+ ": could not create DatabaseConnectionPoolInterface implementation: " |
|
88 |
+ implementationClass); |
|
89 |
e.printStackTrace(); |
|
90 |
} |
|
91 |
|
|
92 |
return instance; |
|
93 |
|
|
94 |
} |
|
95 |
|
|
96 |
public static void main(String arg[]) { |
|
97 |
Connection conn = null; |
|
98 |
try { |
|
99 |
conn = DatabaseConnectionPoolFactory.getDatabaseConnectionPoolInterface().getConnection(); |
|
100 |
log.debug("conn=" + conn); |
|
101 |
|
|
102 |
} catch (SQLException e) { |
|
103 |
// TODO Auto-generated catch block |
|
104 |
e.printStackTrace(); |
|
105 |
} catch (ConnectionNotAvailableException e) { |
|
106 |
// TODO Auto-generated catch block |
|
107 |
e.printStackTrace(); |
|
108 |
} |
|
109 |
finally { |
|
110 |
try { |
|
111 |
conn.close(); |
|
112 |
} catch (SQLException e) { |
|
113 |
// TODO Auto-generated catch block |
|
114 |
e.printStackTrace(); |
|
115 |
} |
|
116 |
} |
|
117 |
} |
|
118 |
} |
src/edu/ucsb/nceas/metacat/dataquery/DataQuery.java | ||
---|---|---|
55 | 55 |
*/ |
56 | 56 |
public DataQuery() { |
57 | 57 |
// initialize the endpoint, not authenticated |
58 |
endPointInfo = new ConfigurableEcogridEndPoint();
|
|
58 |
endPointInfo = new MetacatEcogridEndPoint();
|
|
59 | 59 |
init(); |
60 | 60 |
} |
61 | 61 |
|
62 | 62 |
public DataQuery(String sessionId) { |
63 | 63 |
// initialize the necessary parts |
64 |
endPointInfo = new ConfigurableAuthenticatedEcogridEndPoint(sessionId);
|
|
64 |
endPointInfo = new MetacatAuthenticatedEcogridEndPoint(sessionId);
|
|
65 | 65 |
init(); |
66 | 66 |
} |
67 | 67 |
|
68 | 68 |
private void init() { |
69 |
connectionPool = DatabaseConnectionPoolFactory.getDatabaseConnectionPoolInterface(); |
|
69 |
connectionPool = MetacatDatabaseConnectionPoolFactory.getDatabaseConnectionPoolInterface();
|
|
70 | 70 |
dataManager = |
71 | 71 |
DataManager.getInstance(connectionPool, connectionPool.getDBAdapterName()); |
72 | 72 |
} |
src/edu/ucsb/nceas/metacat/dataquery/MetacatAuthenticatedEcogridEndPoint.java | ||
---|---|---|
1 |
/** |
|
2 |
* '$RCSfile: ConfigurableEcogridEndPoint.java,v $' |
|
3 |
* |
|
4 |
* '$Author: leinfelder $' |
|
5 |
* '$Date: 2008/06/20 17:47:12 $' |
|
6 |
* '$Revision: 1.1 $' |
|
7 |
* |
|
8 |
* For Details: http://ecoinformatics.org |
|
9 |
* |
|
10 |
* Copyright (c) 2007 The Regents of the University of California. |
|
11 |
* All rights reserved. |
|
12 |
* |
|
13 |
* Permission is hereby granted, without written agreement and without |
|
14 |
* license or royalty fees, to use, copy, modify, and distribute this |
|
15 |
* software and its documentation for any purpose, provided that the |
|
16 |
* above copyright notice and the following two paragraphs appear in |
|
17 |
* all copies of this software. |
|
18 |
* |
|
19 |
* IN NO EVENT SHALL THE UNIVERSITY OF CALIFORNIA BE LIABLE TO ANY PARTY |
|
20 |
* FOR DIRECT, INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES |
|
21 |
* ARISING OUT OF THE USE OF THIS SOFTWARE AND ITS DOCUMENTATION, EVEN |
|
22 |
* IF THE UNIVERSITY OF CALIFORNIA HAS BEEN ADVISED OF THE POSSIBILITY |
|
23 |
* OF SUCH DAMAGE. |
|
24 |
* |
|
25 |
* THE UNIVERSITY OF CALIFORNIA SPECIFICALLY DISCLAIMS ANY WARRANTIES, |
|
26 |
* INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF |
|
27 |
* MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE SOFTWARE |
|
28 |
* PROVIDED HEREUNDER IS ON AN "AS IS" BASIS, AND THE UNIVERSITY |
|
29 |
* OF CALIFORNIA HAS NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, |
|
30 |
* UPDATES, ENHANCEMENTS, OR MODIFICATIONS. |
|
31 |
*/ |
|
32 |
package edu.ucsb.nceas.metacat.dataquery; |
|
33 |
|
|
34 |
import org.ecoinformatics.datamanager.download.AuthenticatedEcogridEndPointInterface; |
|
35 |
|
|
36 |
import edu.ucsb.nceas.metacat.properties.PropertyService; |
|
37 |
import edu.ucsb.nceas.utilities.PropertyNotFoundException; |
|
38 |
|
|
39 |
/** |
|
40 |
* This class implements AuthenticatedEcogridEndPointInterface |
|
41 |
* and is configurable using the properties file. |
|
42 |
* Useful for switching to remote endpoints etc. |
|
43 |
* |
|
44 |
* @author leinfelder |
|
45 |
* |
|
46 |
*/ |
|
47 |
public class MetacatAuthenticatedEcogridEndPoint |
|
48 |
extends MetacatEcogridEndPoint implements AuthenticatedEcogridEndPointInterface { |
|
49 |
|
|
50 |
private String metacatAuthenticatedEcogridEndPoint = null; |
|
51 |
private String sessionId = null; |
|
52 |
|
|
53 |
public MetacatAuthenticatedEcogridEndPoint() { |
|
54 |
super(); |
|
55 |
if (!loadProperties()) { |
|
56 |
metacatAuthenticatedEcogridEndPoint = baseURL + "AuthenticatedQueryService"; |
|
57 |
} |
|
58 |
} |
|
59 |
|
|
60 |
public MetacatAuthenticatedEcogridEndPoint(String sessionId) { |
|
61 |
this(); |
|
62 |
this.sessionId = sessionId; |
|
63 |
} |
|
64 |
|
|
65 |
private boolean loadProperties() { |
|
66 |
try { |
|
67 |
metacatAuthenticatedEcogridEndPoint = PropertyService.getProperty("datamanager.endpoint.authenticatedquery"); |
|
68 |
} catch (PropertyNotFoundException e) { |
|
69 |
//e.printStackTrace(); |
|
70 |
return false; |
|
71 |
} |
|
72 |
if (metacatAuthenticatedEcogridEndPoint == null || metacatAuthenticatedEcogridEndPoint.length() == 0) { |
|
73 |
return false; |
|
74 |
} |
|
75 |
return true; |
|
76 |
} |
|
77 |
|
|
78 |
/** |
|
79 |
* Gets the end point which Metacat implements authenticated ecogrid interface. |
|
80 |
* This end point will be used to handle ecogrid protocol |
|
81 |
* |
|
82 |
* @return end point url string |
|
83 |
*/ |
|
84 |
public String getMetacatAuthenticatedEcogridEndPoint() |
|
85 |
{ |
|
86 |
return metacatAuthenticatedEcogridEndPoint; |
|
87 |
} |
|
88 |
|
|
89 |
public String getSessionId() |
|
90 |
{ |
|
91 |
return sessionId; |
|
92 |
} |
|
93 |
|
|
94 |
public void setSessionId(String id) { |
|
95 |
sessionId = id; |
|
96 |
} |
|
97 |
|
|
98 |
} |
|
99 |
|
src/edu/ucsb/nceas/metacat/dataquery/MetacatDatabaseConnectionPoolFactory.java | ||
---|---|---|
1 |
/** |
|
2 |
* '$RCSfile: DatabaseConnectionPoolFactory.java,v $' |
|
3 |
* |
|
4 |
* '$Author: leinfelder $' |
|
5 |
* '$Date: 2007/10/05 21:10:17 $' |
|
6 |
* '$Revision: 1.1 $' |
|
7 |
* |
|
8 |
* For Details: http://kepler.ecoinformatics.org |
|
9 |
* |
|
10 |
* Copyright (c) 2003 The Regents of the University of California. |
|
11 |
* All rights reserved. |
|
12 |
* |
|
13 |
* Permission is hereby granted, without written agreement and without |
|
14 |
* license or royalty fees, to use, copy, modify, and distribute this |
|
15 |
* software and its documentation for any purpose, provided that the |
|
16 |
* above copyright notice and the following two paragraphs appear in |
|
17 |
* all copies of this software. |
|
18 |
* |
|
19 |
* IN NO EVENT SHALL THE UNIVERSITY OF CALIFORNIA BE LIABLE TO ANY PARTY |
|
20 |
* FOR DIRECT, INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES |
|
21 |
* ARISING OUT OF THE USE OF THIS SOFTWARE AND ITS DOCUMENTATION, EVEN |
|
22 |
* IF THE UNIVERSITY OF CALIFORNIA HAS BEEN ADVISED OF THE POSSIBILITY |
|
23 |
* OF SUCH DAMAGE. |
|
24 |
* |
|
25 |
* THE UNIVERSITY OF CALIFORNIA SPECIFICALLY DISCLAIMS ANY WARRANTIES, |
|
26 |
* INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF |
|
27 |
* MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE SOFTWARE |
|
28 |
* PROVIDED HEREUNDER IS ON AN "AS IS" BASIS, AND THE UNIVERSITY |
|
29 |
* OF CALIFORNIA HAS NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, |
|
30 |
* UPDATES, ENHANCEMENTS, OR MODIFICATIONS. |
|
31 |
*/ |
|
32 |
package edu.ucsb.nceas.metacat.dataquery; |
|
33 |
|
|
34 |
import edu.ucsb.nceas.metacat.properties.PropertyService; |
|
35 |
|
|
36 |
import java.sql.Connection; |
|
37 |
import java.sql.SQLException; |
|
38 |
|
|
39 |
import org.apache.commons.logging.Log; |
|
40 |
import org.apache.commons.logging.LogFactory; |
|
41 |
import org.ecoinformatics.datamanager.database.ConnectionNotAvailableException; |
|
42 |
import org.ecoinformatics.datamanager.database.DatabaseConnectionPoolInterface; |
|
43 |
|
|
44 |
/** |
|
45 |
* This class provides an implementation of DataConnetionPoolInterface |
|
46 |
* Implementation and database information for this class will be read from property file. |
|
47 |
* |
|
48 |
* @author leinfelder |
|
49 |
* |
|
50 |
*/ |
|
51 |
public class MetacatDatabaseConnectionPoolFactory { |
|
52 |
|
|
53 |
public static Log log = LogFactory.getLog(MetacatDatabaseConnectionPoolFactory.class); |
|
54 |
|
|
55 |
private static String implementationClass = null; |
|
56 |
|
|
57 |
static { |
|
58 |
loadOptions(); |
|
59 |
} |
|
60 |
|
|
61 |
/** |
|
62 |
* Constructor. Loading database parameter from property file |
|
63 |
* |
|
64 |
*/ |
|
65 |
public MetacatDatabaseConnectionPoolFactory() { |
|
66 |
} |
|
67 |
|
|
68 |
/** |
|
69 |
* Loads Data Manager options from a configuration file. |
|
70 |
*/ |
|
71 |
private static void loadOptions() { |
|
72 |
try { |
|
73 |
implementationClass = PropertyService.getProperty("datamanager.implementation"); |
|
74 |
} |
|
75 |
catch (Exception e) { |
|
76 |
log.error("Error in loading options: " + e.getMessage()); |
|
77 |
} |
|
78 |
} |
|
79 |
|
|
80 |
public static DatabaseConnectionPoolInterface getDatabaseConnectionPoolInterface() { |
|
81 |
DatabaseConnectionPoolInterface instance = null; |
|
82 |
try { |
|
83 |
instance = |
|
84 |
(DatabaseConnectionPoolInterface) Class.forName(implementationClass).newInstance(); |
|
85 |
} catch (Exception e) { |
|
86 |
log.error(e.getMessage() |
|
87 |
+ ": could not create DatabaseConnectionPoolInterface implementation: " |
|
88 |
+ implementationClass); |
|
89 |
e.printStackTrace(); |
|
90 |
} |
|
91 |
|
|
92 |
return instance; |
|
93 |
|
|
94 |
} |
|
95 |
|
|
96 |
public static void main(String arg[]) { |
|
97 |
Connection conn = null; |
|
98 |
try { |
|
99 |
conn = MetacatDatabaseConnectionPoolFactory.getDatabaseConnectionPoolInterface().getConnection(); |
|
100 |
log.debug("conn=" + conn); |
|
101 |
|
|
102 |
} catch (SQLException e) { |
|
103 |
// TODO Auto-generated catch block |
|
104 |
e.printStackTrace(); |
|
105 |
} catch (ConnectionNotAvailableException e) { |
|
106 |
// TODO Auto-generated catch block |
|
107 |
e.printStackTrace(); |
|
108 |
} |
|
109 |
finally { |
|
110 |
try { |
|
111 |
conn.close(); |
|
112 |
} catch (SQLException e) { |
|
113 |
// TODO Auto-generated catch block |
|
114 |
e.printStackTrace(); |
|
115 |
} |
|
116 |
} |
|
117 |
} |
|
118 |
} |
src/edu/ucsb/nceas/metacat/dataquery/MetacatEcogridEndPoint.java | ||
---|---|---|
1 |
/** |
|
2 |
* '$RCSfile: ConfigurableEcogridEndPoint.java,v $' |
|
3 |
* |
|
4 |
* '$Author: leinfelder $' |
|
5 |
* '$Date: 2008/06/20 17:47:12 $' |
|
6 |
* '$Revision: 1.1 $' |
|
7 |
* |
|
8 |
* For Details: http://ecoinformatics.org |
|
9 |
* |
|
10 |
* Copyright (c) 2007 The Regents of the University of California. |
|
11 |
* All rights reserved. |
|
12 |
* |
|
13 |
* Permission is hereby granted, without written agreement and without |
|
14 |
* license or royalty fees, to use, copy, modify, and distribute this |
|
15 |
* software and its documentation for any purpose, provided that the |
|
16 |
* above copyright notice and the following two paragraphs appear in |
|
17 |
* all copies of this software. |
|
18 |
* |
|
19 |
* IN NO EVENT SHALL THE UNIVERSITY OF CALIFORNIA BE LIABLE TO ANY PARTY |
|
20 |
* FOR DIRECT, INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES |
|
21 |
* ARISING OUT OF THE USE OF THIS SOFTWARE AND ITS DOCUMENTATION, EVEN |
|
22 |
* IF THE UNIVERSITY OF CALIFORNIA HAS BEEN ADVISED OF THE POSSIBILITY |
|
23 |
* OF SUCH DAMAGE. |
|
24 |
* |
|
25 |
* THE UNIVERSITY OF CALIFORNIA SPECIFICALLY DISCLAIMS ANY WARRANTIES, |
|
26 |
* INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF |
|
27 |
* MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE SOFTWARE |
|
28 |
* PROVIDED HEREUNDER IS ON AN "AS IS" BASIS, AND THE UNIVERSITY |
|
29 |
* OF CALIFORNIA HAS NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, |
|
30 |
* UPDATES, ENHANCEMENTS, OR MODIFICATIONS. |
|
31 |
*/ |
|
32 |
package edu.ucsb.nceas.metacat.dataquery; |
|
33 |
|
|
34 |
import org.ecoinformatics.datamanager.download.EcogridEndPointInterface; |
|
35 |
|
|
36 |
import edu.ucsb.nceas.metacat.properties.PropertyService; |
|
37 |
import edu.ucsb.nceas.utilities.PropertyNotFoundException; |
|
38 |
|
|
39 |
/** |
|
40 |
* This class implements EcogridEndPointInterface and is configurable using a properties file. |
|
41 |
* Should be useful for switching to remote endpoints etc. |
|
42 |
* |
|
43 |
* @author leinfelder |
|
44 |
* |
|
45 |
*/ |
|
46 |
public class MetacatEcogridEndPoint implements EcogridEndPointInterface |
|
47 |
{ |
|
48 |
|
|
49 |
private String metacatEcogridEndPoint = null; |
|
50 |
private String metacatEcogridAuthEndPoint = null; |
|
51 |
private String metacatEcogridPutEndPoint = null; |
|
52 |
private String metacatEcogridIdentifierEndPoint = null; |
|
53 |
private String srbEcogridEndPoint = null; |
|
54 |
private String srbMachineName = null; |
|
55 |
|
|
56 |
protected String baseURL = null; |
|
57 |
|
|
58 |
public MetacatEcogridEndPoint() { |
|
59 |
if (!loadProperties()) { |
|
60 |
try { |
|
61 |
//use values from server where deployed |
|
62 |
baseURL = |
|
63 |
"http://" |
|
64 |
+ PropertyService.getProperty("server.name") |
|
65 |
+ ":" |
|
66 |
+ PropertyService.getProperty("server.httpPort") |
|
67 |
+ "/" |
|
68 |
+ PropertyService.getProperty("application.context") |
|
69 |
+ "/services/"; |
|
70 |
metacatEcogridEndPoint = baseURL + "QueryService"; |
|
71 |
metacatEcogridAuthEndPoint = baseURL + "AuthenticationService"; |
|
72 |
metacatEcogridPutEndPoint = baseURL + "PutService"; |
|
73 |
metacatEcogridIdentifierEndPoint = baseURL + "IdentificationService"; |
|
74 |
} catch (PropertyNotFoundException e) { |
|
75 |
//we are SOL now |
|
76 |
e.printStackTrace(); |
|
77 |
} |
|
78 |
} |
|
79 |
} |
|
80 |
|
|
81 |
private boolean loadProperties() { |
|
82 |
try { |
|
83 |
metacatEcogridEndPoint = PropertyService.getProperty("datamanager.endpoint.query"); |
|
84 |
metacatEcogridAuthEndPoint = PropertyService.getProperty("datamanager.endpoint.authentication"); |
|
85 |
metacatEcogridPutEndPoint = PropertyService.getProperty("datamanager.endpoint.put"); |
|
86 |
metacatEcogridIdentifierEndPoint = PropertyService.getProperty("datamanager.endpoint.identifier"); |
|
87 |
srbEcogridEndPoint = PropertyService.getProperty("datamanager.srb.endpoint"); |
|
88 |
srbMachineName = PropertyService.getProperty("datamanager.srb.machinename"); |
|
89 |
} catch (PropertyNotFoundException e) { |
|
90 |
//e.printStackTrace(); |
|
91 |
return false; |
|
92 |
} |
|
93 |
if (metacatEcogridEndPoint == null || metacatEcogridEndPoint.length() == 0) { |
|
94 |
return false; |
|
95 |
} |
|
96 |
return true; |
|
97 |
} |
|
98 |
/** |
|
99 |
* Gets the end point which Metacat implements ecogrid interface. |
|
100 |
* This end point will be used to handle ecogrid protocol |
|
101 |
* |
|
102 |
* @return end point url string |
|
103 |
*/ |
|
104 |
public String getMetacatEcogridEndPoint() |
|
105 |
{ |
|
106 |
return metacatEcogridEndPoint; |
|
107 |
} |
|
108 |
|
|
109 |
public String getMetacatEcogridAuthEndPoint() |
|
110 |
{ |
|
111 |
return metacatEcogridAuthEndPoint; |
|
112 |
} |
|
113 |
|
|
114 |
public String getMetacatEcogridPutEndPoint() |
|
115 |
{ |
|
116 |
return metacatEcogridPutEndPoint; |
|
117 |
} |
|
118 |
|
|
119 |
public String getMetacatEcogridIdentifierEndPoint() |
|
120 |
{ |
|
121 |
return metacatEcogridIdentifierEndPoint; |
|
122 |
} |
|
123 |
|
|
124 |
|
|
125 |
/** |
|
126 |
* Gets the end point which SRB implements ecogrid interface. |
|
127 |
* This end point will be used to handle srb protocol. |
|
128 |
* |
|
129 |
* @return end point url string |
|
130 |
*/ |
|
131 |
public String getSRBEcogridEndPoint() |
|
132 |
{ |
|
133 |
return srbEcogridEndPoint; |
|
134 |
} |
|
135 |
|
|
136 |
|
|
137 |
/** |
|
138 |
* Gets the machine name which srb protocol will be used. |
|
139 |
* The default value for this class is "srb-mcat.sdsc.edu". |
|
140 |
* |
|
141 |
* @return the machine name of srb server |
|
142 |
*/ |
|
143 |
public String getSRBMachineName() |
|
144 |
{ |
|
145 |
return srbMachineName; |
|
146 |
} |
|
147 |
|
|
148 |
} |
|
149 |
|
Also available in: Unified diff
refactor the names of these Data Manager implementation classes so that it's easier to use them with the default/local versions of similar. These classes utilize Metacat-specific configuration values rather than relying soley on the bundles that are used in the stand-alone DM lib.