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<%@ page language="java" %>
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<%
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/**
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* '$RCSfile$'
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* Authors: Matt Jones
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* Copyright: 2008 Regents of the University of California and the
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* National Center for Ecological Analysis and Synthesis
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* For Details: http://www.nceas.ucsb.edu/
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*
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* '$Author$'
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* '$Date$'
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* '$Revision$'
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*
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* This is an HTML document for displaying metadata catalog tools
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*
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* This program is free software; you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation; either version 2 of the License, or
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* (at your option) any later version.
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*
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* This program is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with this program; if not, write to the Free Software
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* Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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*/
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%>
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<%@ include file="../../common/common-settings.jsp"%>
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<%@ include file="../../common/configure-check.jsp"%>
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<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
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<html>
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<head>
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<title>OBFS Data Registry</title>
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<link rel="stylesheet" type="text/css"
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href="<%=STYLE_SKINS_URL%>/obfs/obfs.css"></link>
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<script language="JavaScript" type="text/JavaScript"
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src="<%=STYLE_SKINS_URL%>/obfs/obfs.js"></script>
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<script language="JavaScript" type="text/JavaScript"
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src="<%=STYLE_COMMON_URL%>/branding.js"></script>
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<script language="Javascript">
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function trim(stringToTrim) {
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return stringToTrim.replace(/^\s*/, '').replace(/\s*$/,'');
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}
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function checkSearch(submitFormObj) {
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var searchString = trim(submitFormObj.searchstring.value);
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var checkBox = document.getElementById("searchAll");
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if (searchString=="") {
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if (confirm("Show *all* data in the KNB?")) {
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searchString = "%";
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} else {
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return false;
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}
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}
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if(!checkBox.checked && searchString!="%"){
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submitFormObj.query.value = "<pathquery version=\"1.2\">"
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+"<querytitle>Web-Search</querytitle>"
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+"<returndoctype>eml://ecoinformatics.org/eml-2.1.1</returndoctype>"
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+"<returndoctype>eml://ecoinformatics.org/eml-2.1.0</returndoctype>"
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+"<returndoctype>eml://ecoinformatics.org/eml-2.0.1</returndoctype>"
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+"<returndoctype>eml://ecoinformatics.org/eml-2.0.0</returndoctype>"
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+"<returndoctype>-//ecoinformatics.org//eml-dataset-2.0.0beta6//EN</returndoctype>"
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+"<returndoctype>-//ecoinformatics.org//eml-dataset-2.0.0beta4//EN</returndoctype>"
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+"<returndoctype>-//NCEAS//resource//EN</returndoctype>"
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+"<returndoctype>-//NCEAS//eml-dataset//EN</returndoctype>"
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+"<returnfield>originator/individualName/surName</returnfield>"
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+"<returnfield>originator/individualName/givenName</returnfield>"
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+"<returnfield>creator/individualName/surName</returnfield>"
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+"<returnfield>creator/individualName/givenName</returnfield>"
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+"<returnfield>originator/organizationName</returnfield>"
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+"<returnfield>creator/organizationName</returnfield>"
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+"<returnfield>dataset/title/value</returnfield>"
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+"<returnfield>dataset/title</returnfield>"
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+"<returnfield>keyword</returnfield>"
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+"<returnfield>keyword/value</returnfield>"
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+"<querygroup operator=\"INTERSECT\">"
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+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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+"<value>Organization of Biological Field Stations</value>"
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+"<pathexpr>organizationName</pathexpr>"
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+"</queryterm>"
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+"<querygroup operator=\"UNION\">"
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+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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+"<value>" + searchString + "</value>"
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+"<pathexpr>surName</pathexpr>"
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+"</queryterm>"
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+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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+"<value>" + searchString + "</value>"
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+"<pathexpr>givenName</pathexpr>"
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+"</queryterm>"
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+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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+"<value>" + searchString + "</value>"
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+"<pathexpr>keyword</pathexpr>"
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+"</queryterm>"
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+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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+"<value>" + searchString + "</value>"
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+"<pathexpr>keyword/value</pathexpr>"
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+"</queryterm>"
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+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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+"<value>" + searchString + "</value>"
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+"<pathexpr>para</pathexpr>"
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+"</queryterm>"
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+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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+"<value>" + searchString + "</value>"
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+"<pathexpr>geographicDescription</pathexpr>"
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+"</queryterm>"
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+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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+"<value>" + searchString + "</value>"
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+"<pathexpr>literalLayout</pathexpr>"
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+"</queryterm>"
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+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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+"<value>" + searchString + "</value>"
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+"<pathexpr>title</pathexpr>"
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+"</queryterm>"
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+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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+"<value>" + searchString + "</value>"
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+"<pathexpr>title/value</pathexpr>"
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+"</queryterm>"
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+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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+"<value>" + searchString + "</value>"
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+"<pathexpr>@packageId</pathexpr>"
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+"</queryterm>"
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+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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+"<value>" + searchString + "</value>"
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+"<pathexpr>abstract/para</pathexpr>"
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+"</queryterm>"
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+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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+"<value>" + searchString + "</value>"
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+"<pathexpr>abstract/para/value</pathexpr>"
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+"</queryterm>"
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+"</querygroup>"
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+"</querygroup>"
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+"</pathquery>";
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} else {
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queryTermString = "";
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if(searchString != "%"){
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queryTermString = "<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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+"<value>" + searchString + "</value>"
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+"</queryterm>";
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}
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submitFormObj.query.value = "<pathquery version=\"1.2\">"
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+"<querytitle>Web-Search</querytitle>"
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+"<returndoctype>eml://ecoinformatics.org/eml-2.1.1</returndoctype>"
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+"<returndoctype>eml://ecoinformatics.org/eml-2.1.0</returndoctype>"
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+"<returndoctype>eml://ecoinformatics.org/eml-2.0.1</returndoctype>"
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+"<returndoctype>eml://ecoinformatics.org/eml-2.0.0</returndoctype>"
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+"<returndoctype>-//ecoinformatics.org//eml-dataset-2.0.0beta6//EN</returndoctype>"
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+"<returndoctype>-//ecoinformatics.org//eml-dataset-2.0.0beta4//EN</returndoctype>"
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+"<returndoctype>-//NCEAS//resource//EN</returndoctype>"
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+"<returndoctype>-//NCEAS//eml-dataset//EN</returndoctype>"
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+"<returnfield>originator/individualName/surName</returnfield>"
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+"<returnfield>originator/individualName/givenName</returnfield>"
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+"<returnfield>creator/individualName/surName</returnfield>"
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+"<returnfield>creator/individualName/givenName</returnfield>"
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| 162 |
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+"<returnfield>originator/organizationName</returnfield>"
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+"<returnfield>creator/organizationName</returnfield>"
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+"<returnfield>dataset/title</returnfield>"
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+"<returnfield>dataset/title/value</returnfield>"
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+"<returnfield>keyword</returnfield>"
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+"<returnfield>keyword/value</returnfield>"
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+"<querygroup operator=\"INTERSECT\">"
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+"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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+"<value>Organization of Biological Field Stations</value>"
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+"<pathexpr>organizationName</pathexpr>"
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+"</queryterm>"
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+ queryTermString
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+"</querygroup>"
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+"</pathquery>";
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}
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return true;
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}
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function searchAll(){
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var checkBox = document.getElementById("searchCheckBox");
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if(checkBox.checked == true){
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alert("You have selected to search all possible existing fields. This search will take longer.");
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}
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}
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</script>
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</head>
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<body>
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<script language="JavaScript">
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insertTemplateOpening("<%=CONTEXT_URL%>");
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insertSearchBox("<%=CONTEXT_URL%>");
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</script>
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<table width="760" border="0" cellspacing="0" cellpadding="0">
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<tr><td colspan="5">
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<p>
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Welcome to the OBFS Data Registry. This is the primary source for
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comprehensive information about scientific and research data sets collected
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within or under the auspices of the Organization of Biological Field Stations.
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</p>
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</td></tr>
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<tr><td colspan="5">
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<p>This project is a cooperative effort of <a href="http://www.obfs.org">OBFS</a>,
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the <a href="http://www.nceas.ucsb.edu">National Center for
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Ecological Analysis and Synthesis (NCEAS)</a>, the
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<a href="http://nrs.ucop.edu">UC Natural Reserve System</a>, and the
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<a href="http://www.lternet.edu">LTER Network Office</a>.
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The Data Registry is based on software developed by the
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<a href="http://knb.ecoinformatics.org">Knowledge Network for
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Biocomplexity (KNB)</a>, and
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houses metadata that are compliant with
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<a href="http://knb.ecoinformatics.org/software/eml/">Ecological Metadata
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Language (EML)</a>.
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</p>
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</td></tr>
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<tr><td colspan="5">
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<p>
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Credit for the data sets in this registry goes to the investigators who
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collected the data, and also to the OBFS sites and system for providing
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an effective and pleasant environment for research and education at
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the individual research stations.
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Our particular thanks go out to the OBFS reserve managers, scientists,
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and stewards for their comments and continuing support.
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</p>
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</td></tr>
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<tr><td colspan="5">
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<p><b>Registry Tools</b></p>
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<p>
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<menu>
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<li><span class="searchbox"><a name="search"> Search for Data Sets</a></span><br />
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<menu>
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<form method="POST" action="<%=SERVLET_URL%>" target="_top" onSubmit="return checkSearch(this)">
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<input value="UNION" name="operator" type="hidden">
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<input size="14" name="searchstring" type="text" value="" id="searchBox">
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<input name="query" type="hidden"/>
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<input name="qformat" value="obfs" type="hidden">
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| 238 |
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<input name="enableediting" value="true" type="hidden">
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<input type="hidden" name="action" value="squery">
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<input value="Search" type="submit">
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</form>
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<form>
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<input name="search" type="radio" checked><span class="text_plain"> Search Title, Abstract, Keywords, Personnel (Quicker)</span></input><br>
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<input name="search" type="radio" id="searchAll"><span class="text_plain"> Search all fields (Slower)</span></input><br>
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</form>
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This tool allows you to search the registry for data
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sets of interest. When you type text in the box and
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click on the "Search" button, the search will only
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be conducted within the title, author, abstract,
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and keyword fields. Checking the "Search All Fields"
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box will search on these and all other existing
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fields (this search will take more time).
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<br><br>
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You can use the '%' character as a wildcard in your
|
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searches (e.g., '%biodiversity%' would locate any
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phrase with the word biodiversity embedded within it).
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</menu>
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| 259 |
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<br><br>
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| 260 |
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</li>
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| 261 |
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| 262 |
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<li><a href="<%=SERVLET_URL%>?action=query&operator=INTERSECT&anyfield=%25&organizationName=Organization%20of%20Biological%20Field%20Stations&qformat=obfs&enableediting=true&returndoctype=eml://ecoinformatics.org/eml-2.1.1&returndoctype=eml://ecoinformatics.org/eml-2.1.0&returndoctype=eml://ecoinformatics.org/eml-2.0.1&returndoctype=eml://ecoinformatics.org/eml-2.0.0&returndoctype=-//ecoinformatics.org//eml-dataset-2.0.0beta6//EN&returndoctype=-//ecoinformatics.org//eml-dataset-2.0.0beta4//EN&returnfield=dataset/title&returnfield=keyword&returnfield=originator/individualName/surName&returnfield=creator/individualName/surName&returnfield=originator/organizationName&returnfield=creator/organizationName">Browse existing OBFS data sets</a><br />
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<menu>
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The registry search system is used to locate data sets of interest
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by searching through existing registered data sets.
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Presently the search covers all fields, including
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author, title, abstract, keywords, and other documentation
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| 268 |
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for each dataset. (More sophisticated search capabilities,
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| 269 |
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including boolean field searches, will be available in future.)
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</menu>
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| 271 |
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</li>
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| 272 |
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<p> </p>
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| 273 |
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<li><a href="<%=CGI_URL%>/register-dataset.cgi?cfg=obfs">Register a new OBFS
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data set</a><br />
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<menu>
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The registration page is used to submit information about a <b>new</b>
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data set associated with OBFS research. The documentation about the
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data set will be reviewed and then submitted to the Registry.
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| 279 |
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</menu>
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| 280 |
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</li>
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| 281 |
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<p> </p>
|
| 282 |
|
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<li>
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| 283 |
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<a href="map.jsp"> View Interactive Map </a>
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| 284 |
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<menu> View and query the geographic coverages of the data sets. </menu>
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| 285 |
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</li>
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| 286 |
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