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/**
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* '$RCSfile$'
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* Copyright: 2011 Regents of the University of California and the
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* National Center for Ecological Analysis and Synthesis
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*
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* '$Author: cjones $'
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* '$Date: 2011-11-02 20:00:50 -0700 (Wed, 02 Nov 2011) $'
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*
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* This program is free software; you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation; either version 2 of the License, or
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* (at your option) any later version.
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*
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* This program is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with this program; if not, write to the Free Software
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* Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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*/
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package edu.ucsb.nceas.metacat.restservice;
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import java.io.ByteArrayInputStream;
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import java.io.File;
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import java.io.FileInputStream;
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import java.io.IOException;
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import java.io.InputStream;
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import java.io.OutputStream;
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import java.util.Date;
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import java.util.Map;
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import javax.servlet.ServletContext;
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import javax.servlet.http.HttpServletRequest;
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import javax.servlet.http.HttpServletResponse;
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import javax.xml.parsers.ParserConfigurationException;
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import org.apache.commons.fileupload.FileUploadException;
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import org.apache.commons.io.IOUtils;
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import org.apache.log4j.Logger;
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import org.dataone.client.ObjectFormatCache;
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import org.dataone.service.exceptions.BaseException;
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import org.dataone.service.exceptions.IdentifierNotUnique;
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import org.dataone.service.exceptions.InsufficientResources;
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import org.dataone.service.exceptions.InvalidRequest;
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import org.dataone.service.exceptions.InvalidSystemMetadata;
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import org.dataone.service.exceptions.InvalidToken;
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import org.dataone.service.exceptions.NotAuthorized;
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import org.dataone.service.exceptions.NotFound;
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import org.dataone.service.exceptions.NotImplemented;
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import org.dataone.service.exceptions.ServiceFailure;
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import org.dataone.service.exceptions.UnsupportedType;
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import org.dataone.service.types.v1.AccessPolicy;
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import org.dataone.service.types.v1.Checksum;
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import org.dataone.service.types.v1.Event;
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import org.dataone.service.types.v1.Identifier;
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import org.dataone.service.types.v1.Log;
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import org.dataone.service.types.v1.NodeReference;
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import org.dataone.service.types.v1.ObjectFormat;
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import org.dataone.service.types.v1.ObjectFormatIdentifier;
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import org.dataone.service.types.v1.ObjectFormatList;
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import org.dataone.service.types.v1.ObjectLocationList;
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import org.dataone.service.types.v1.Permission;
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import org.dataone.service.types.v1.Replica;
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import org.dataone.service.types.v1.ReplicationPolicy;
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import org.dataone.service.types.v1.ReplicationStatus;
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import org.dataone.service.types.v1.Session;
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import org.dataone.service.types.v1.Subject;
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import org.dataone.service.types.v1.SystemMetadata;
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import org.dataone.service.util.DateTimeMarshaller;
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import org.dataone.service.util.TypeMarshaller;
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import org.jibx.runtime.JiBXException;
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import org.xml.sax.SAXException;
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import edu.ucsb.nceas.metacat.dataone.CNodeService;
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/**
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* CN REST service implementation handler
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*
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* ******************
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CNCore -- DONE
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create() - POST /d1/cn/object/PID
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listFormats() - GET /d1/cn/formats
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getFormat() - GET /d1/cn/formats/FMTID
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getLogRecords - GET /d1/cn/log
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reserveIdentifier() - POST /d1/cn/reserve
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listNodes() - Not implemented
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registerSystemMetadata() - POST /d1/meta/PID
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CNRead -- DONE
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get() - GET /d1/cn/object/PID
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getSystemMetadata() - GET /d1/cn/meta/PID
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resolve() - GET /d1/cn/resolve/PID
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assertRelation() - GET /d1/cn/assertRelation/PID
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getChecksum() - GET /d1/cn/checksum
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search() - Not implemented in Metacat
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CNAuthorization
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setOwner() - PUT /d1/cn/owner/PID
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isAuthorized() - GET /d1/cn/isAuthorized/PID
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setAccessPolicy() - POST /d1/cn/accessRules
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CNIdentity - not implemented at all on Metacat
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CNReplication
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setReplicationStatus() - PUT /replicationNotifications/PID
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updateReplicationMetadata() - PUT /replicationMetadata/PID
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setReplicationPolicy() - PUT /replicationPolicies/PID
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isNodeAuthorized() - GET /replicationAuthorizations/PID
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CNRegister -- not implemented at all in Metacat
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* ******************
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* @author leinfelder
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*
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*/
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public class CNResourceHandler extends D1ResourceHandler {
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/** CN-specific operations **/
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protected static final String RESOURCE_RESERVE = "reserve";
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protected static final String RESOURCE_FORMATS = "formats";
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protected static final String RESOURCE_RESOLVE = "resolve";
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protected static final String RESOURCE_ASSERT_RELATION = "assertRelation";
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protected static final String RESOURCE_OWNER = "owner";
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protected static final String RESOURCE_REPLICATION_POLICY = "replicaPolicies";
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protected static final String RESOURCE_REPLICATION_META = "replicaMetadata";
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protected static final String RESOURCE_REPLICATION_AUTHORIZED = "replicaAuthorizations";
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protected static final String RESOURCE_REPLICATION_NOTIFY = "replicaNotifications";
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public CNResourceHandler(ServletContext servletContext,
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HttpServletRequest request, HttpServletResponse response) {
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super(servletContext, request, response);
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logMetacat = Logger.getLogger(CNResourceHandler.class);
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}
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/**
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* This function is called from REST API servlet and handles each request to the servlet
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*
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* @param httpVerb (GET, POST, PUT or DELETE)
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*/
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@Override
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public void handle(byte httpVerb) {
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// prepare the handler
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super.handle(httpVerb);
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try {
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// get the resource
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String resource = request.getPathInfo();
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resource = resource.substring(resource.indexOf("/") + 1);
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// for the rest of the resouce
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String extra = null;
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logMetacat.debug("handling verb " + httpVerb + " request with resource '" + resource + "'");
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boolean status = false;
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if (resource != null) {
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if (resource.startsWith(RESOURCE_ACCESS_RULES) && httpVerb == PUT) {
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logMetacat.debug("Setting access policy");
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// after the command
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extra = parseTrailing(resource, RESOURCE_ACCESS_RULES);
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setAccess(extra);
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status = true;
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logMetacat.debug("done setting access");
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} else if (resource.startsWith(RESOURCE_META)) {
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logMetacat.debug("Using resource: " + RESOURCE_META);
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// after the command
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extra = parseTrailing(resource, RESOURCE_META);
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// get
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if (httpVerb == GET) {
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getSystemMetadataObject(extra);
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status = true;
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}
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// post to register system metadata
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if (httpVerb == POST) {
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registerSystemMetadata(extra);
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status = true;
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}
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} else if (resource.startsWith(RESOURCE_RESERVE)) {
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// reserve the ID (in params)
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if (httpVerb == POST) {
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reserve();
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status = true;
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}
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} else if (resource.startsWith(RESOURCE_ASSERT_RELATION)) {
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// after the command
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extra = parseTrailing(resource, RESOURCE_ASSERT_RELATION);
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// reserve the ID (in params)
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if (httpVerb == GET) {
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assertRelation(extra);
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status = true;
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}
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} else if (resource.startsWith(RESOURCE_RESOLVE)) {
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// after the command
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extra = parseTrailing(resource, RESOURCE_RESOLVE);
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// resolve the object location
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if (httpVerb == GET) {
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resolve(extra);
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status = true;
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}
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} else if (resource.startsWith(RESOURCE_OWNER)) {
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// after the command
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extra = parseTrailing(resource, RESOURCE_OWNER);
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// set the owner
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if (httpVerb == PUT) {
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owner(extra);
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status = true;
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}
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} else if (resource.startsWith(RESOURCE_IS_AUTHORIZED)) {
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// after the command
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extra = parseTrailing(resource, RESOURCE_IS_AUTHORIZED);
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// authorized?
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if (httpVerb == GET) {
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isAuthorized(extra);
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status = true;
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}
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} else if (resource.startsWith(RESOURCE_OBJECTS)) {
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logMetacat.debug("Using resource 'object'");
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logMetacat.debug("D1 Rest: Starting resource processing...");
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// after the command
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extra = parseTrailing(resource, RESOURCE_OBJECTS);
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logMetacat.debug("objectId: " + extra);
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logMetacat.debug("verb:" + httpVerb);
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if (httpVerb == GET) {
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if (extra != null) {
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getObject(extra);
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} else {
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query();
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}
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status = true;
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} else if (httpVerb == POST) {
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putObject(extra, FUNCTION_NAME_INSERT);
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status = true;
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}
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} else if (resource.startsWith(RESOURCE_FORMATS)) {
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logMetacat.debug("Using resource: " + RESOURCE_FORMATS);
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// after the command
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extra = parseTrailing(resource, RESOURCE_FORMATS);
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// handle each verb
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if (httpVerb == GET) {
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if (extra == null) {
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// list the formats collection
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listFormats();
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} else {
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// get the specified format
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getFormat(extra);
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}
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status = true;
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}
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} else if (resource.startsWith(RESOURCE_LOG)) {
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logMetacat.debug("Using resource: " + RESOURCE_LOG);
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//handle log events
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if (httpVerb == GET) {
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getLog();
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status = true;
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}
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} else if (resource.startsWith(RESOURCE_CHECKSUM)) {
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logMetacat.debug("Using resource: " + RESOURCE_CHECKSUM);
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// after the command
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extra = parseTrailing(resource, RESOURCE_CHECKSUM);
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//handle checksum requests
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if (httpVerb == GET) {
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checksum(extra);
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status = true;
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}
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} else if ( resource.startsWith(RESOURCE_REPLICATION_POLICY) &&
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httpVerb == PUT) {
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logMetacat.debug("Using resource: " + RESOURCE_REPLICATION_POLICY);
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// get the trailing pid
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extra = parseTrailing(resource, RESOURCE_REPLICATION_POLICY);
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setReplicationPolicy(extra);
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status = true;
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} else if ( resource.startsWith(RESOURCE_REPLICATION_META) &&
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httpVerb == PUT) {
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logMetacat.debug("Using resource: " + RESOURCE_REPLICATION_META);
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// get the trailing pid
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extra = parseTrailing(resource, RESOURCE_REPLICATION_META);
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updateReplicationMetadata(extra);
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status = true;
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} else if ( resource.startsWith(RESOURCE_REPLICATION_NOTIFY) &&
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httpVerb == PUT ) {
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logMetacat.debug("Using resource: " + RESOURCE_REPLICATION_NOTIFY);
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// get the trailing pid
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extra = parseTrailing(resource, RESOURCE_REPLICATION_NOTIFY);
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setReplicationStatus(extra);
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status = true;
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} else if ( resource.startsWith(RESOURCE_REPLICATION_AUTHORIZED)
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&& httpVerb == GET) {
|
322
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logMetacat.debug("Using resource: " + RESOURCE_REPLICATION_AUTHORIZED);
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// get the trailing pid
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extra = parseTrailing(resource, RESOURCE_REPLICATION_AUTHORIZED);
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isNodeAuthorized(extra);
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status = true;
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328
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329
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}
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330
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331
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if (!status) {
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throw new ServiceFailure("0000", "Unknown error, status = " + status);
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333
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}
|
334
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} else {
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throw new InvalidRequest("0000", "No resource matched for " + resource);
|
336
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}
|
337
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} catch (BaseException be) {
|
338
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// report Exceptions as clearly and generically as possible
|
339
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OutputStream out = null;
|
340
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try {
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out = response.getOutputStream();
|
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} catch (IOException ioe) {
|
343
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logMetacat.error("Could not get output stream from response", ioe);
|
344
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}
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345
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serializeException(be, out);
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346
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} catch (Exception e) {
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347
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// report Exceptions as clearly and generically as possible
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348
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logMetacat.error(e.getClass() + ": " + e.getMessage(), e);
|
349
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OutputStream out = null;
|
350
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try {
|
351
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out = response.getOutputStream();
|
352
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} catch (IOException ioe) {
|
353
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logMetacat.error("Could not get output stream from response", ioe);
|
354
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}
|
355
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ServiceFailure se = new ServiceFailure("0000", e.getMessage());
|
356
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serializeException(se, out);
|
357
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}
|
358
|
}
|
359
|
|
360
|
|
361
|
/**
|
362
|
* Get the checksum for the given guid
|
363
|
*
|
364
|
* @param guid
|
365
|
* @throws NotImplemented
|
366
|
* @throws InvalidRequest
|
367
|
* @throws NotFound
|
368
|
* @throws NotAuthorized
|
369
|
* @throws ServiceFailure
|
370
|
* @throws InvalidToken
|
371
|
* @throws IOException
|
372
|
* @throws JiBXException
|
373
|
*/
|
374
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private void checksum(String guid) throws InvalidToken, ServiceFailure, NotAuthorized, NotFound, InvalidRequest, NotImplemented, JiBXException, IOException {
|
375
|
Identifier guidid = new Identifier();
|
376
|
guidid.setValue(guid);
|
377
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logMetacat.debug("getting checksum for object " + guid);
|
378
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Checksum c = CNodeService.getInstance(request).getChecksum(session, guidid);
|
379
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logMetacat.debug("got checksum " + c.getValue());
|
380
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response.setStatus(200);
|
381
|
logMetacat.debug("serializing response");
|
382
|
TypeMarshaller.marshalTypeToOutputStream(c, response.getOutputStream());
|
383
|
logMetacat.debug("done serializing response.");
|
384
|
|
385
|
}
|
386
|
|
387
|
/**
|
388
|
* get the logs based on passed params. Available
|
389
|
* params are token, fromDate, toDate, event. See
|
390
|
* http://mule1.dataone.org/ArchitectureDocs/mn_api_crud.html#MN_crud.getLogRecords
|
391
|
* for more info
|
392
|
* @throws NotImplemented
|
393
|
* @throws InvalidRequest
|
394
|
* @throws NotAuthorized
|
395
|
* @throws ServiceFailure
|
396
|
* @throws InvalidToken
|
397
|
* @throws IOException
|
398
|
* @throws JiBXException
|
399
|
*/
|
400
|
private void getLog() throws InvalidToken, ServiceFailure, NotAuthorized, InvalidRequest, NotImplemented, IOException, JiBXException
|
401
|
{
|
402
|
|
403
|
Date fromDate = null;
|
404
|
Date toDate = null;
|
405
|
Event event = null;
|
406
|
Integer start = null;
|
407
|
Integer count = null;
|
408
|
|
409
|
try {
|
410
|
String fromDateS = params.get("fromDate")[0];
|
411
|
logMetacat.debug("param fromDateS: " + fromDateS);
|
412
|
fromDate = DateTimeMarshaller.deserializeDateToUTC(fromDateS);
|
413
|
} catch (Exception e) {
|
414
|
logMetacat.warn("Could not parse fromDate: " + e.getMessage());
|
415
|
}
|
416
|
try {
|
417
|
String toDateS = params.get("toDate")[0];
|
418
|
logMetacat.debug("param toDateS: " + toDateS);
|
419
|
toDate = DateTimeMarshaller.deserializeDateToUTC(toDateS);
|
420
|
} catch (Exception e) {
|
421
|
logMetacat.warn("Could not parse toDate: " + e.getMessage());
|
422
|
}
|
423
|
try {
|
424
|
String eventS = params.get("event")[0];
|
425
|
event = Event.convert(eventS);
|
426
|
} catch (Exception e) {
|
427
|
logMetacat.warn("Could not parse event: " + e.getMessage());
|
428
|
}
|
429
|
logMetacat.debug("fromDate: " + fromDate + " toDate: " + toDate);
|
430
|
|
431
|
try {
|
432
|
start = Integer.parseInt(params.get("start")[0]);
|
433
|
} catch (Exception e) {
|
434
|
logMetacat.warn("Could not parse start: " + e.getMessage());
|
435
|
}
|
436
|
try {
|
437
|
count = Integer.parseInt(params.get("count")[0]);
|
438
|
} catch (Exception e) {
|
439
|
logMetacat.warn("Could not parse count: " + e.getMessage());
|
440
|
}
|
441
|
|
442
|
logMetacat.debug("calling getLogRecords");
|
443
|
Log log = CNodeService.getInstance(request).getLogRecords(session, fromDate, toDate, event, start, count);
|
444
|
|
445
|
OutputStream out = response.getOutputStream();
|
446
|
response.setStatus(200);
|
447
|
response.setContentType("text/xml");
|
448
|
|
449
|
TypeMarshaller.marshalTypeToOutputStream(log, out);
|
450
|
|
451
|
}
|
452
|
|
453
|
/**
|
454
|
* Implements REST version of DataONE CRUD API --> get
|
455
|
* @param guid ID of data object to be read
|
456
|
* @throws NotImplemented
|
457
|
* @throws InvalidRequest
|
458
|
* @throws NotFound
|
459
|
* @throws NotAuthorized
|
460
|
* @throws ServiceFailure
|
461
|
* @throws InvalidToken
|
462
|
* @throws IOException
|
463
|
*/
|
464
|
protected void getObject(String guid) throws InvalidToken, ServiceFailure, NotAuthorized, NotFound, InvalidRequest, NotImplemented, IOException {
|
465
|
|
466
|
Identifier id = new Identifier();
|
467
|
id.setValue(guid);
|
468
|
|
469
|
SystemMetadata sm = CNodeService.getInstance(request).getSystemMetadata(session, id);
|
470
|
|
471
|
//set the content type
|
472
|
if(sm.getFormatId().getValue().trim().equals(
|
473
|
ObjectFormatCache.getInstance().getFormat("text/csv").getFormatId().getValue()))
|
474
|
{
|
475
|
response.setContentType("text/csv");
|
476
|
response.setHeader("Content-Disposition", "inline; filename=" + id.getValue() + ".csv");
|
477
|
}
|
478
|
else if(sm.getFormatId().getValue().trim().equals(
|
479
|
ObjectFormatCache.getInstance().getFormat("text/plain").getFormatId().getValue()))
|
480
|
{
|
481
|
response.setContentType("text/plain");
|
482
|
response.setHeader("Content-Disposition", "inline; filename=" + id.getValue() + ".txt");
|
483
|
}
|
484
|
else if(sm.getFormatId().getValue().trim().equals(
|
485
|
ObjectFormatCache.getInstance().getFormat("application/octet-stream").getFormatId().getValue()))
|
486
|
{
|
487
|
response.setContentType("application/octet-stream");
|
488
|
}
|
489
|
else
|
490
|
{
|
491
|
response.setContentType("text/xml");
|
492
|
response.setHeader("Content-Disposition", "inline; filename=" + id.getValue() + ".xml");
|
493
|
}
|
494
|
|
495
|
InputStream data = CNodeService.getInstance(request).get(session, id);
|
496
|
|
497
|
OutputStream out = response.getOutputStream();
|
498
|
response.setStatus(200);
|
499
|
IOUtils.copyLarge(data, out);
|
500
|
|
501
|
}
|
502
|
|
503
|
|
504
|
/**
|
505
|
* Implements REST version of DataONE CRUD API --> getSystemMetadata
|
506
|
* @param guid ID of data object to be read
|
507
|
* @throws NotImplemented
|
508
|
* @throws InvalidRequest
|
509
|
* @throws NotFound
|
510
|
* @throws NotAuthorized
|
511
|
* @throws ServiceFailure
|
512
|
* @throws InvalidToken
|
513
|
* @throws IOException
|
514
|
* @throws JiBXException
|
515
|
*/
|
516
|
protected void getSystemMetadataObject(String guid) throws InvalidToken, ServiceFailure, NotAuthorized, NotFound, InvalidRequest, NotImplemented, IOException, JiBXException {
|
517
|
|
518
|
Identifier id = new Identifier();
|
519
|
id.setValue(guid);
|
520
|
SystemMetadata sysmeta = CNodeService.getInstance(request).getSystemMetadata(session, id);
|
521
|
|
522
|
response.setContentType("text/xml");
|
523
|
response.setStatus(200);
|
524
|
OutputStream out = response.getOutputStream();
|
525
|
|
526
|
// Serialize and write it to the output stream
|
527
|
TypeMarshaller.marshalTypeToOutputStream(sysmeta, out);
|
528
|
}
|
529
|
|
530
|
/**
|
531
|
* Earthgrid API > Put Service >Put Function : calls MetacatHandler > handleInsertOrUpdateAction
|
532
|
*
|
533
|
* @param guid - ID of data object to be inserted or updated. If action is update, the pid
|
534
|
* is the existing pid. If insert, the pid is the new one
|
535
|
* @throws InvalidRequest
|
536
|
* @throws ServiceFailure
|
537
|
* @throws IdentifierNotUnique
|
538
|
* @throws JiBXException
|
539
|
* @throws NotImplemented
|
540
|
* @throws InvalidSystemMetadata
|
541
|
* @throws InsufficientResources
|
542
|
* @throws UnsupportedType
|
543
|
* @throws NotAuthorized
|
544
|
* @throws InvalidToken
|
545
|
* @throws IOException
|
546
|
* @throws IllegalAccessException
|
547
|
* @throws InstantiationException
|
548
|
*/
|
549
|
protected void putObject(String pid, String action) throws ServiceFailure, InvalidRequest, IdentifierNotUnique, JiBXException, InvalidToken, NotAuthorized, UnsupportedType, InsufficientResources, InvalidSystemMetadata, NotImplemented, IOException, InstantiationException, IllegalAccessException {
|
550
|
logMetacat.debug("Entering putObject: " + pid + "/" + action);
|
551
|
|
552
|
// Read the incoming data from its Mime Multipart encoding
|
553
|
Map<String, File> files = collectMultipartFiles();
|
554
|
InputStream object = null;
|
555
|
InputStream sysmeta = null;
|
556
|
|
557
|
File smFile = files.get("sysmeta");
|
558
|
sysmeta = new FileInputStream(smFile);
|
559
|
File objFile = files.get("object");
|
560
|
object = new FileInputStream(objFile);
|
561
|
|
562
|
if (action.equals(FUNCTION_NAME_INSERT)) { //handle inserts
|
563
|
|
564
|
logMetacat.debug("Commence creation...");
|
565
|
SystemMetadata smd = TypeMarshaller.unmarshalTypeFromStream(SystemMetadata.class, sysmeta);
|
566
|
|
567
|
Identifier id = new Identifier();
|
568
|
id.setValue(pid);
|
569
|
logMetacat.debug("creating object with pid " + id.getValue());
|
570
|
Identifier rId = CNodeService.getInstance(request).create(session, id, object, smd);
|
571
|
|
572
|
OutputStream out = response.getOutputStream();
|
573
|
response.setStatus(200);
|
574
|
response.setContentType("text/xml");
|
575
|
|
576
|
TypeMarshaller.marshalTypeToOutputStream(rId, out);
|
577
|
|
578
|
} else {
|
579
|
throw new InvalidRequest("1000", "Operation must be create.");
|
580
|
}
|
581
|
}
|
582
|
|
583
|
/**
|
584
|
* List the object formats registered with the system
|
585
|
* @throws NotImplemented
|
586
|
* @throws InsufficientResources
|
587
|
* @throws NotFound
|
588
|
* @throws ServiceFailure
|
589
|
* @throws InvalidRequest
|
590
|
* @throws IOException
|
591
|
* @throws JiBXException
|
592
|
*/
|
593
|
private void listFormats() throws InvalidRequest, ServiceFailure, NotFound, InsufficientResources, NotImplemented, IOException, JiBXException {
|
594
|
logMetacat.debug("Entering listFormats()");
|
595
|
|
596
|
ObjectFormatList objectFormatList = CNodeService.getInstance(request).listFormats();
|
597
|
// get the response output stream
|
598
|
OutputStream out = response.getOutputStream();
|
599
|
response.setStatus(200);
|
600
|
response.setContentType("text/xml");
|
601
|
|
602
|
TypeMarshaller.marshalTypeToOutputStream(objectFormatList, out);
|
603
|
|
604
|
}
|
605
|
|
606
|
/**
|
607
|
* Return the requested object format
|
608
|
*
|
609
|
* @param fmtidStr the requested format identifier as a string
|
610
|
* @throws NotImplemented
|
611
|
* @throws InsufficientResources
|
612
|
* @throws NotFound
|
613
|
* @throws ServiceFailure
|
614
|
* @throws InvalidRequest
|
615
|
* @throws IOException
|
616
|
* @throws JiBXException
|
617
|
*/
|
618
|
private void getFormat(String fmtidStr) throws InvalidRequest, ServiceFailure, NotFound, InsufficientResources, NotImplemented, IOException, JiBXException {
|
619
|
logMetacat.debug("Entering listFormats()");
|
620
|
|
621
|
ObjectFormatIdentifier fmtid = new ObjectFormatIdentifier();
|
622
|
fmtid.setValue(fmtidStr);
|
623
|
|
624
|
// get the specified object format
|
625
|
ObjectFormat objectFormat = CNodeService.getInstance(request).getFormat(fmtid);
|
626
|
|
627
|
OutputStream out = response.getOutputStream();
|
628
|
response.setStatus(200);
|
629
|
response.setContentType("text/xml");
|
630
|
|
631
|
TypeMarshaller.marshalTypeToOutputStream(objectFormat, out);
|
632
|
|
633
|
}
|
634
|
|
635
|
/**
|
636
|
* Reserve the given Identifier
|
637
|
* @throws InvalidToken
|
638
|
* @throws ServiceFailure
|
639
|
* @throws NotAuthorized
|
640
|
* @throws IdentifierNotUnique
|
641
|
* @throws NotImplemented
|
642
|
* @throws InvalidRequest
|
643
|
* @throws IOException
|
644
|
* @throws JiBXException
|
645
|
*/
|
646
|
private void reserve() throws InvalidToken, ServiceFailure, NotAuthorized, IdentifierNotUnique, NotImplemented, InvalidRequest, IOException, JiBXException {
|
647
|
Identifier pid = null;
|
648
|
String scope = null;
|
649
|
String format = null;
|
650
|
// gather the params
|
651
|
try {
|
652
|
String id = params.get("pid")[0];
|
653
|
pid = new Identifier();
|
654
|
pid.setValue(id);
|
655
|
} catch (Exception e) {
|
656
|
logMetacat.warn("pid not specified");
|
657
|
}
|
658
|
try {
|
659
|
scope = params.get("scope")[0];
|
660
|
} catch (Exception e) {
|
661
|
logMetacat.warn("pid not specified");
|
662
|
}
|
663
|
try {
|
664
|
format = params.get("format")[0];
|
665
|
} catch (Exception e) {
|
666
|
logMetacat.warn("pid not specified");
|
667
|
}
|
668
|
// call the implementation
|
669
|
boolean result = CNodeService.getInstance(request).reserveIdentifier(session, pid);
|
670
|
OutputStream out = response.getOutputStream();
|
671
|
response.setStatus(200);
|
672
|
response.setContentType("text/xml");
|
673
|
// nothing to send back
|
674
|
}
|
675
|
|
676
|
/**
|
677
|
*
|
678
|
* @param id
|
679
|
* @throws InvalidRequest
|
680
|
* @throws InvalidToken
|
681
|
* @throws ServiceFailure
|
682
|
* @throws NotAuthorized
|
683
|
* @throws NotFound
|
684
|
* @throws NotImplemented
|
685
|
* @throws IOException
|
686
|
* @throws JiBXException
|
687
|
*/
|
688
|
private void resolve(String id) throws InvalidRequest, InvalidToken, ServiceFailure, NotAuthorized, NotFound, NotImplemented, IOException, JiBXException {
|
689
|
Identifier pid = new Identifier();
|
690
|
pid.setValue(id);
|
691
|
ObjectLocationList locationList = CNodeService.getInstance(request).resolve(session, pid);
|
692
|
OutputStream out = response.getOutputStream();
|
693
|
response.setStatus(200);
|
694
|
response.setContentType("text/xml");
|
695
|
TypeMarshaller.marshalTypeToOutputStream(locationList, out);
|
696
|
|
697
|
}
|
698
|
|
699
|
/**
|
700
|
* Assert that a relationship exists between two resources
|
701
|
* @param id
|
702
|
* @return
|
703
|
* @throws InvalidToken
|
704
|
* @throws ServiceFailure
|
705
|
* @throws NotAuthorized
|
706
|
* @throws NotFound
|
707
|
* @throws InvalidRequest
|
708
|
* @throws NotImplemented
|
709
|
*/
|
710
|
private boolean assertRelation(String id) throws InvalidToken, ServiceFailure, NotAuthorized, NotFound, InvalidRequest, NotImplemented {
|
711
|
Identifier pidOfSubject = new Identifier();
|
712
|
pidOfSubject.setValue(id);
|
713
|
String relationship = null;
|
714
|
try {
|
715
|
relationship = params.get("relationship")[0];
|
716
|
} catch (Exception e) {
|
717
|
logMetacat.warn("relationship not specified");
|
718
|
}
|
719
|
Identifier pidOfObject = new Identifier();
|
720
|
try {
|
721
|
String objPid = params.get("pidOfObject")[0];
|
722
|
pidOfObject.setValue(objPid);
|
723
|
} catch (Exception e) {
|
724
|
logMetacat.warn("pidOfObject not specified");
|
725
|
}
|
726
|
boolean result = CNodeService.getInstance(request).assertRelation(session, pidOfSubject, relationship, pidOfObject);
|
727
|
response.setStatus(200);
|
728
|
response.setContentType("text/xml");
|
729
|
return result;
|
730
|
}
|
731
|
|
732
|
/**
|
733
|
* Set the owner of a resource
|
734
|
* @param id
|
735
|
* @throws JiBXException
|
736
|
* @throws InvalidToken
|
737
|
* @throws ServiceFailure
|
738
|
* @throws NotFound
|
739
|
* @throws NotAuthorized
|
740
|
* @throws NotImplemented
|
741
|
* @throws InvalidRequest
|
742
|
* @throws IOException
|
743
|
* @throws IllegalAccessException
|
744
|
* @throws InstantiationException
|
745
|
*/
|
746
|
private void owner(String id)
|
747
|
throws JiBXException, InvalidToken, ServiceFailure,
|
748
|
NotFound, NotAuthorized, NotImplemented, InvalidRequest, IOException,
|
749
|
InstantiationException, IllegalAccessException {
|
750
|
|
751
|
Identifier pid = new Identifier();
|
752
|
pid.setValue(id);
|
753
|
|
754
|
long serialVersion = 0L;
|
755
|
String serialVersionStr = null;
|
756
|
|
757
|
// get the serialVersion
|
758
|
try {
|
759
|
serialVersionStr = params.get("serialVersion")[0];
|
760
|
serialVersion = new Long(serialVersionStr).longValue();
|
761
|
|
762
|
} catch (NullPointerException e) {
|
763
|
String msg = "The 'serialVersion' must be provided as a parameter and was not.";
|
764
|
logMetacat.error(msg);
|
765
|
throw new InvalidRequest("4442", msg);
|
766
|
|
767
|
}
|
768
|
|
769
|
// get the subject
|
770
|
String subjectStr = params.get("subject")[0];
|
771
|
Subject subject = TypeMarshaller.unmarshalTypeFromStream(Subject.class, new ByteArrayInputStream(subjectStr.getBytes("UTF-8")));
|
772
|
|
773
|
Identifier retPid = CNodeService.getInstance(request).setOwner(session, pid, subject, serialVersion);
|
774
|
OutputStream out = response.getOutputStream();
|
775
|
response.setStatus(200);
|
776
|
response.setContentType("text/xml");
|
777
|
TypeMarshaller.marshalTypeToOutputStream(retPid, out);
|
778
|
}
|
779
|
|
780
|
/**
|
781
|
* Processes the authorization check for given id
|
782
|
* @param id
|
783
|
* @return
|
784
|
* @throws ServiceFailure
|
785
|
* @throws InvalidToken
|
786
|
* @throws NotFound
|
787
|
* @throws NotAuthorized
|
788
|
* @throws NotImplemented
|
789
|
* @throws InvalidRequest
|
790
|
*/
|
791
|
private boolean isAuthorized(String id) throws ServiceFailure, InvalidToken, NotFound, NotAuthorized, NotImplemented, InvalidRequest {
|
792
|
Identifier pid = new Identifier();
|
793
|
pid.setValue(id);
|
794
|
String permission = params.get("action")[0];
|
795
|
boolean result = CNodeService.getInstance(request).isAuthorized(session, pid, Permission.convert(permission));
|
796
|
response.setStatus(200);
|
797
|
response.setContentType("text/xml");
|
798
|
return result;
|
799
|
}
|
800
|
|
801
|
/**
|
802
|
* Register System Metadata without data or metadata object
|
803
|
* @param pid identifier for System Metadata entry
|
804
|
* @throws JiBXException
|
805
|
* @throws FileUploadException
|
806
|
* @throws IOException
|
807
|
* @throws InvalidRequest
|
808
|
* @throws ServiceFailure
|
809
|
* @throws InvalidSystemMetadata
|
810
|
* @throws NotAuthorized
|
811
|
* @throws NotImplemented
|
812
|
* @throws IllegalAccessException
|
813
|
* @throws InstantiationException
|
814
|
*/
|
815
|
protected Identifier registerSystemMetadata(String pid) throws ServiceFailure, InvalidRequest, IOException, FileUploadException, JiBXException, NotImplemented, NotAuthorized, InvalidSystemMetadata, InstantiationException, IllegalAccessException {
|
816
|
logMetacat.debug("Entering registerSystemMetadata: " + pid);
|
817
|
|
818
|
// get the system metadata from the request
|
819
|
SystemMetadata systemMetadata = collectSystemMetadata();
|
820
|
|
821
|
Identifier guid = new Identifier();
|
822
|
guid.setValue(pid);
|
823
|
logMetacat.debug("registering system metadata with pid " + guid.getValue());
|
824
|
Identifier retGuid = CNodeService.getInstance(request).registerSystemMetadata(session, guid, systemMetadata);
|
825
|
|
826
|
response.setStatus(200);
|
827
|
response.setContentType("text/xml");
|
828
|
return retGuid;
|
829
|
|
830
|
}
|
831
|
|
832
|
/**
|
833
|
* set the access perms on a document
|
834
|
* @throws JiBXException
|
835
|
* @throws InvalidRequest
|
836
|
* @throws NotImplemented
|
837
|
* @throws NotAuthorized
|
838
|
* @throws NotFound
|
839
|
* @throws ServiceFailure
|
840
|
* @throws InvalidToken
|
841
|
* @throws IllegalAccessException
|
842
|
* @throws InstantiationException
|
843
|
* @throws IOException
|
844
|
* @throws SAXException
|
845
|
* @throws ParserConfigurationException
|
846
|
*/
|
847
|
protected void setAccess(String pid)
|
848
|
throws JiBXException, InvalidToken, ServiceFailure, NotFound,
|
849
|
NotAuthorized, NotImplemented, InvalidRequest, IOException,
|
850
|
InstantiationException, IllegalAccessException, ParserConfigurationException,
|
851
|
SAXException {
|
852
|
|
853
|
long serialVersion = 0L;
|
854
|
String serialVersionStr = null;
|
855
|
|
856
|
// get the serialVersion
|
857
|
try {
|
858
|
serialVersionStr = params.get("serialVersion")[0];
|
859
|
serialVersion = new Long(serialVersionStr).longValue();
|
860
|
|
861
|
} catch (NullPointerException e) {
|
862
|
String msg = "The 'serialVersion' must be provided as a parameter and was not.";
|
863
|
logMetacat.error(msg);
|
864
|
throw new InvalidRequest("4402", msg);
|
865
|
|
866
|
}
|
867
|
|
868
|
Identifier id = new Identifier();
|
869
|
id.setValue(pid);
|
870
|
|
871
|
AccessPolicy accessPolicy = collectAccessPolicy();
|
872
|
CNodeService.getInstance(request).setAccessPolicy(session, id, accessPolicy, serialVersion);
|
873
|
|
874
|
}
|
875
|
|
876
|
/**
|
877
|
* Pass to the CN search service
|
878
|
*
|
879
|
* @throws NotImplemented
|
880
|
* @throws InvalidRequest
|
881
|
* @throws NotAuthorized
|
882
|
* @throws ServiceFailure
|
883
|
* @throws InvalidToken
|
884
|
* @throws Exception
|
885
|
*/
|
886
|
private void query()
|
887
|
throws InvalidToken, ServiceFailure, NotAuthorized, InvalidRequest, NotImplemented {
|
888
|
|
889
|
String query = null;
|
890
|
String queryType = null;
|
891
|
try {
|
892
|
query = params.get("query")[0];
|
893
|
} catch (Exception e) {
|
894
|
logMetacat.warn("query not specified");
|
895
|
}
|
896
|
try {
|
897
|
String qt = params.get("queryType")[0];
|
898
|
queryType = qt;
|
899
|
} catch (Exception e) {
|
900
|
logMetacat.warn("queryType not specified");
|
901
|
}
|
902
|
|
903
|
// expecting to throw NotImplemented
|
904
|
CNodeService.getInstance(request).search(session, queryType, query);
|
905
|
}
|
906
|
|
907
|
/**
|
908
|
* Pass the request to get node replication authorization to CNodeService
|
909
|
*
|
910
|
* @param pid the identifier of the object to get authorization to replicate
|
911
|
*
|
912
|
* @throws NotImplemented
|
913
|
* @throws NotAuthorized
|
914
|
* @throws InvalidToken
|
915
|
* @throws ServiceFailure
|
916
|
* @throws NotFound
|
917
|
* @throws InvalidRequest
|
918
|
*/
|
919
|
public boolean isNodeAuthorized(String pid)
|
920
|
throws NotImplemented, NotAuthorized, InvalidToken, ServiceFailure,
|
921
|
NotFound, InvalidRequest {
|
922
|
|
923
|
boolean result = false;
|
924
|
Subject targetNodeSubject = new Subject();
|
925
|
String nodeSubject = null;
|
926
|
Permission permission = null;
|
927
|
String replPermission = null;
|
928
|
|
929
|
// get the pid
|
930
|
Identifier identifier = new Identifier();
|
931
|
identifier.setValue(pid);
|
932
|
|
933
|
// get the target node subject
|
934
|
try {
|
935
|
nodeSubject = params.get("targetNodeSubject")[0];
|
936
|
targetNodeSubject.setValue(nodeSubject);
|
937
|
|
938
|
} catch (NullPointerException e) {
|
939
|
String msg = "The 'targetNodeSubject' must be provided as a parameter and was not.";
|
940
|
logMetacat.error(msg);
|
941
|
throw new InvalidRequest("4873", msg);
|
942
|
|
943
|
}
|
944
|
|
945
|
// get the permission
|
946
|
try {
|
947
|
replPermission = params.get("replicatePermission")[0];
|
948
|
permission = Permission.convert(replPermission);
|
949
|
|
950
|
} catch (NullPointerException e) {
|
951
|
String msg = "The 'replicatePermission' must be provided as a parameter and was not.";
|
952
|
logMetacat.error(msg);
|
953
|
throw new InvalidRequest("4873", msg);
|
954
|
|
955
|
}
|
956
|
|
957
|
result =
|
958
|
CNodeService.getInstance(request).isNodeAuthorized(session, targetNodeSubject, identifier, permission);
|
959
|
|
960
|
response.setStatus(200);
|
961
|
response.setContentType("text/xml");
|
962
|
return result;
|
963
|
|
964
|
}
|
965
|
|
966
|
/**
|
967
|
* Pass the request to set the replication policy to CNodeService
|
968
|
*
|
969
|
* @param pid the identifier of the object to set the replication policy on
|
970
|
*
|
971
|
* @throws NotImplemented
|
972
|
* @throws NotFound
|
973
|
* @throws NotAuthorized
|
974
|
* @throws ServiceFailure
|
975
|
* @throws InvalidRequest
|
976
|
* @throws InvalidToken
|
977
|
* @throws IOException
|
978
|
* @throws InstantiationException
|
979
|
* @throws IllegalAccessException
|
980
|
* @throws JiBXException
|
981
|
*/
|
982
|
public boolean setReplicationPolicy(String pid)
|
983
|
throws NotImplemented, NotFound, NotAuthorized, ServiceFailure,
|
984
|
InvalidRequest, InvalidToken, IOException, InstantiationException,
|
985
|
IllegalAccessException, JiBXException {
|
986
|
|
987
|
boolean result = false;
|
988
|
ReplicationPolicy policy = null;
|
989
|
long serialVersion = 0L;
|
990
|
String serialVersionStr = null;
|
991
|
|
992
|
Identifier identifier = new Identifier();
|
993
|
identifier.setValue(pid);
|
994
|
|
995
|
// get the serialVersion
|
996
|
try {
|
997
|
serialVersionStr = params.get("serialVersion")[0];
|
998
|
serialVersion = new Long(serialVersionStr).longValue();
|
999
|
|
1000
|
} catch (NullPointerException e) {
|
1001
|
String msg = "The 'serialVersion' must be provided as a parameter and was not.";
|
1002
|
logMetacat.error(msg);
|
1003
|
throw new InvalidRequest("4883", msg);
|
1004
|
|
1005
|
}
|
1006
|
policy = collectReplicationPolicy();
|
1007
|
result =
|
1008
|
CNodeService.getInstance(request).setReplicationPolicy(session, identifier, policy, serialVersion);
|
1009
|
response.setStatus(200);
|
1010
|
response.setContentType("text/xml");
|
1011
|
return result;
|
1012
|
|
1013
|
}
|
1014
|
|
1015
|
/**
|
1016
|
* Pass the request to set the replication status to CNodeService
|
1017
|
*
|
1018
|
* @param pid the identifier of the object to set the replication status on
|
1019
|
*
|
1020
|
* @throws ServiceFailure
|
1021
|
* @throws NotImplemented
|
1022
|
* @throws InvalidToken
|
1023
|
* @throws NotAuthorized
|
1024
|
* @throws InvalidRequest
|
1025
|
* @throws NotFound
|
1026
|
*/
|
1027
|
public boolean setReplicationStatus(String pid)
|
1028
|
throws ServiceFailure, NotImplemented, InvalidToken, NotAuthorized,
|
1029
|
InvalidRequest, NotFound {
|
1030
|
|
1031
|
boolean result = false;
|
1032
|
Identifier identifier = new Identifier();
|
1033
|
identifier.setValue(pid);
|
1034
|
long serialVersion = 0L;
|
1035
|
String serialVersionStr = null;
|
1036
|
ReplicationStatus status = null;
|
1037
|
String replicationStatus = null;
|
1038
|
NodeReference targetNodeRef = null;
|
1039
|
String targetNode = null;
|
1040
|
|
1041
|
// get the serialVersion
|
1042
|
try {
|
1043
|
serialVersionStr = params.get("serialVersion")[0];
|
1044
|
serialVersion = new Long(serialVersionStr).longValue();
|
1045
|
|
1046
|
} catch (NullPointerException e) {
|
1047
|
String msg = "The 'serialVersion' must be provided as a parameter and was not.";
|
1048
|
logMetacat.error(msg);
|
1049
|
throw new InvalidRequest("4730", msg);
|
1050
|
|
1051
|
}
|
1052
|
|
1053
|
// get the replication status param
|
1054
|
try {
|
1055
|
replicationStatus = params.get("status")[0];
|
1056
|
status = ReplicationStatus.convert(replicationStatus);
|
1057
|
} catch (Exception e) {
|
1058
|
// TODO Auto-generated catch block
|
1059
|
e.printStackTrace();
|
1060
|
}
|
1061
|
|
1062
|
// get the target node reference param
|
1063
|
targetNode = params.get("nodeRef")[0];
|
1064
|
targetNodeRef = new NodeReference();
|
1065
|
targetNodeRef.setValue(targetNode);
|
1066
|
|
1067
|
result =
|
1068
|
CNodeService.getInstance(request).setReplicationStatus(session, identifier, targetNodeRef, status, serialVersion);
|
1069
|
response.setStatus(200);
|
1070
|
response.setContentType("text/xml");
|
1071
|
return result;
|
1072
|
|
1073
|
}
|
1074
|
|
1075
|
/**
|
1076
|
* Pass the request to update the replication metadata to CNodeService
|
1077
|
*
|
1078
|
* @param pid the identifier of the object to update the replication metadata on
|
1079
|
*
|
1080
|
* @throws ServiceFailure
|
1081
|
* @throws NotImplemented
|
1082
|
* @throws InvalidToken
|
1083
|
* @throws NotAuthorized
|
1084
|
* @throws InvalidRequest
|
1085
|
* @throws NotFound
|
1086
|
*/
|
1087
|
public boolean updateReplicationMetadata(String pid)
|
1088
|
throws ServiceFailure, NotImplemented, InvalidToken, NotAuthorized,
|
1089
|
InvalidRequest, NotFound {
|
1090
|
|
1091
|
boolean result = false;
|
1092
|
long serialVersion = 0L;
|
1093
|
String serialVersionStr = null;
|
1094
|
Replica replica = null;
|
1095
|
Identifier identifier = new Identifier();
|
1096
|
identifier.setValue(pid);
|
1097
|
|
1098
|
// get the serialVersion
|
1099
|
try {
|
1100
|
serialVersionStr = params.get("serialVersion")[0];
|
1101
|
serialVersion = new Long(serialVersionStr).longValue();
|
1102
|
|
1103
|
} catch (NullPointerException e) {
|
1104
|
String msg = "The 'serialVersion' must be provided as a parameter and was not.";
|
1105
|
logMetacat.error(msg);
|
1106
|
throw new InvalidRequest("4853", msg);
|
1107
|
|
1108
|
}
|
1109
|
|
1110
|
replica = collectReplicaMetadata();
|
1111
|
result =
|
1112
|
CNodeService.getInstance(request).updateReplicationMetadata(session, identifier, replica, serialVersion);
|
1113
|
response.setStatus(200);
|
1114
|
response.setContentType("text/xml");
|
1115
|
return result;
|
1116
|
|
1117
|
}
|
1118
|
|
1119
|
}
|