| 1 |
5371
|
berkley
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CREATE TABLE systemMetadata (
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| 2 |
6136
|
leinfelder
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guid text, -- the globally unique string identifier of the object that the system metadata describes
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| 3 |
6561
|
leinfelder
|
serial_version VARCHAR(256), --the serial version of the object
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| 4 |
6136
|
leinfelder
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date_uploaded TIMESTAMP, -- the date/time the document was first submitted
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| 5 |
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rights_holder VARCHAR(250), --the user who has rights to the document, usually the first persons to upload it
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checksum VARCHAR(512), --the checksum of the doc using the given algorithm (see below)
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checksum_algorithm VARCHAR(250), --the algorithm used to calculate the checksum
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origin_member_node VARCHAR(250), --the member node where the document was first uploaded
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authoritive_member_node VARCHAR(250), --the member node that currently controls the document
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| 10 |
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date_modified TIMESTAMP, -- the last date/time that the file was changed
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| 11 |
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submitter VARCHAR(256), -- the user who originally submitted the doc
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| 12 |
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object_format VARCHAR(256), --the format of the object
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| 13 |
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size VARCHAR(256), --the size of the object
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| 14 |
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replication_allowed boolean, -- replication allowed
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number_replicas INT8, -- the number of replicas allowed
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| 16 |
6375
|
leinfelder
|
obsoletes text, -- the identifier that this record obsoletes
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obsoleted_by text, -- the identifier of the record that replaces this record
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| 18 |
6136
|
leinfelder
|
CONSTRAINT systemMetadata_pk PRIMARY KEY (guid)
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| 19 |
5371
|
berkley
|
);
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| 21 |
6136
|
leinfelder
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CREATE TABLE systemMetadataReplicationPolicy (
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guid text, -- the globally unique string identifier of the object that the system metadata describes
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member_node VARCHAR(250), -- replication member node
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| 24 |
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policy text, -- the policy (preferred, blocked, etc...TBD)
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CONSTRAINT systemMetadataReplicationPolicy_fk
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FOREIGN KEY (guid) REFERENCES systemMetadata
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);
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| 28 |
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| 29 |
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CREATE TABLE systemMetadataReplicationStatus (
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guid text, -- the globally unique string identifier of the object that the system metadata describes
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member_node VARCHAR(250), -- replication member node
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status VARCHAR(250), -- replication status
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date_verified TIMESTAMP, -- the date replication was verified
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CONSTRAINT systemMetadataReplicationStatus_fk
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FOREIGN KEY (guid) REFERENCES systemMetadata
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);
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| 37 |
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| 38 |
6583
|
leinfelder
|
/*
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| 39 |
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* Remove the old Identifier table (pre-2.0)
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| 40 |
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*/
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| 41 |
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DROP TABLE identifier;
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| 42 |
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/*
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* Create the new one (DataONE features)
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| 44 |
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*/
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| 45 |
5276
|
jones
|
CREATE TABLE identifier (
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guid text, -- the globally unique string identifier
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docid VARCHAR(250), -- the local document id #
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| 48 |
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rev INT8, -- the revision part of the local identifier
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| 49 |
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CONSTRAINT identifier_pk PRIMARY KEY (guid)
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);
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| 52 |
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/*
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| 53 |
6012
|
leinfelder
|
* add the nodedatadate column to the tables that need it
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| 54 |
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*/
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| 55 |
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ALTER TABLE xml_nodes ADD COLUMN nodedatadate TIMESTAMP;
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| 56 |
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ALTER TABLE xml_nodes_revisions ADD COLUMN nodedatadate TIMESTAMP;
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ALTER TABLE xml_path_index ADD COLUMN nodedatadate TIMESTAMP;
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| 58 |
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CREATE INDEX xml_path_index_idx5 ON xml_path_index (nodedatadate);
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| 59 |
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| 60 |
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/*
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| 61 |
6136
|
leinfelder
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* Replication changes to support DataONE System Metadata replication
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| 62 |
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*/
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| 63 |
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ALTER TABLE xml_replication ADD COLUMN systemmetadatareplicate INT8;
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| 65 |
6542
|
leinfelder
|
/**
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| 66 |
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* track the user-agent for the request
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| 67 |
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*/
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| 68 |
6730
|
tao
|
ALTER TABLE access_log ADD COLUMN user_agent VARCHAR(512);
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| 69 |
6542
|
leinfelder
|
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| 70 |
6136
|
leinfelder
|
/*
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| 71 |
6658
|
leinfelder
|
* Register the new schema
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| 72 |
5400
|
jones
|
*/
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| 73 |
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INSERT INTO xml_catalog (entry_type, public_id, system_id)
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| 74 |
5709
|
leinfelder
|
VALUES ('Schema', '@eml2_1_1namespace@', '/schema/eml-2.1.1/eml.xsd');
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| 75 |
6744
|
leinfelder
|
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| 76 |
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/**
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| 77 |
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* Generate GUIDs for docid.rev
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| 78 |
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*/
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INSERT INTO identifier (docid, rev, guid)
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| 80 |
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SELECT docid, rev, docid || '.' || rev FROM xml_documents;
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INSERT INTO identifier (docid, rev, guid)
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SELECT docid, revisionid, docid || '.' || revisionid FROM xml_revisions;
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| 84 |
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/**
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| 85 |
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* Allow guid in xml_access table (for system metadata)
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| 86 |
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*/
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| 87 |
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ALTER TABLE xml_access ADD COLUMN guid text;
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| 88 |
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| 89 |
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/**
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| 90 |
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* Upgrade xml_access records to use GUID from identifier table
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| 91 |
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*/
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| 92 |
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INSERT INTO xml_access (
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| 93 |
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guid, principal_name, permission, perm_type, perm_order,
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| 94 |
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docid, accessfileid, begin_time, end_time, ticket_count, subtreeid, startnodeid, endnodeid
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| 95 |
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)
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| 96 |
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SELECT
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| 97 |
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id.guid, xa.principal_name, xa.permission, xa.perm_type, xa.perm_order,
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| 98 |
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xa.docid, xa.accessfileid, xa.begin_time, xa.end_time, xa.ticket_count, xa.subtreeid, xa.startnodeid, xa.endnodeid
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| 99 |
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FROM identifier id, xml_access xa
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| 100 |
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WHERE id.docid = xa.docid;
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| 101 |
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| 102 |
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/**
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| 103 |
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* Include inline access rows -- they have a special guid: 'scope.docid.rev.index'
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| 104 |
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*/
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| 105 |
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INSERT INTO xml_access (
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| 106 |
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guid, principal_name, permission, perm_type, perm_order,
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| 107 |
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docid, accessfileid, begin_time, end_time, ticket_count, subtreeid, startnodeid, endnodeid
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| 108 |
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)
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| 109 |
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SELECT
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| 110 |
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docid, principal_name, permission, perm_type, perm_order,
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| 111 |
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docid, accessfileid, begin_time, end_time, ticket_count, subtreeid, startnodeid, endnodeid
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| 112 |
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FROM xml_access
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| 113 |
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WHERE docid like '%.%.%.%';
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| 114 |
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| 115 |
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/**
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| 116 |
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* Update the accessfileid to use guid
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| 117 |
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* TODO: specific revision should be used
|
| 118 |
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*/
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| 119 |
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UPDATE xml_access
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| 120 |
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SET accessfileid = id.guid
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| 121 |
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FROM identifier id, xml_access xa
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| 122 |
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WHERE xa.accessfileid = id.docid
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| 123 |
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| 124 |
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| 125 |
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/**
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| 126 |
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* Remove old access rules
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| 127 |
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*/
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| 128 |
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DELETE FROM xml_access WHERE guid is null;
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| 129 |
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| 130 |
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/**
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| 131 |
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* clean up the xml_access table
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| 132 |
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*/
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| 133 |
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ALTER TABLE xml_access DROP COLUMN docid;
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| 134 |
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| 135 |
5400
|
jones
|
/*
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| 136 |
5276
|
jones
|
* update the database version
|
| 137 |
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*/
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| 138 |
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UPDATE db_version SET status=0;
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| 139 |
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| 140 |
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INSERT INTO db_version (version, status, date_created)
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| 141 |
6550
|
leinfelder
|
VALUES ('2.0.0', 1, CURRENT_DATE);
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