|
1
|
/**
|
|
2
|
* '$RCSfile$'
|
|
3
|
* Purpose: A class that gets Accession Number, check for uniqueness
|
|
4
|
* and register it into db
|
|
5
|
* Copyright: 2000 Regents of the University of California and the
|
|
6
|
* National Center for Ecological Analysis and Synthesis
|
|
7
|
* Authors: Jivka Bojilova, Matt Jones
|
|
8
|
*
|
|
9
|
* '$Author: leinfelder $'
|
|
10
|
* '$Date: 2011-11-02 20:40:12 -0700 (Wed, 02 Nov 2011) $'
|
|
11
|
* '$Revision: 6595 $'
|
|
12
|
*
|
|
13
|
* This program is free software; you can redistribute it and/or modify
|
|
14
|
* it under the terms of the GNU General Public License as published by
|
|
15
|
* the Free Software Foundation; either version 2 of the License, or
|
|
16
|
* (at your option) any later version.
|
|
17
|
*
|
|
18
|
* This program is distributed in the hope that it will be useful,
|
|
19
|
* but WITHOUT ANY WARRANTY; without even the implied warranty of
|
|
20
|
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
|
21
|
* GNU General Public License for more details.
|
|
22
|
*
|
|
23
|
* You should have received a copy of the GNU General Public License
|
|
24
|
* along with this program; if not, write to the Free Software
|
|
25
|
* Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
|
26
|
*/
|
|
27
|
package edu.ucsb.nceas.metacat.index;
|
|
28
|
|
|
29
|
import java.io.FileInputStream;
|
|
30
|
import java.io.FileNotFoundException;
|
|
31
|
import java.io.IOException;
|
|
32
|
import java.io.InputStream;
|
|
33
|
import java.util.ArrayList;
|
|
34
|
import java.util.Calendar;
|
|
35
|
import java.util.Collections;
|
|
36
|
import java.util.Date;
|
|
37
|
import java.util.List;
|
|
38
|
import java.util.TimerTask;
|
|
39
|
|
|
40
|
import javax.xml.parsers.ParserConfigurationException;
|
|
41
|
import javax.xml.xpath.XPathExpressionException;
|
|
42
|
|
|
43
|
import org.apache.commons.logging.Log;
|
|
44
|
import org.apache.commons.logging.LogFactory;
|
|
45
|
import org.apache.solr.client.solrj.SolrServerException;
|
|
46
|
import org.dataone.configuration.Settings;
|
|
47
|
import org.dataone.service.exceptions.InvalidRequest;
|
|
48
|
import org.dataone.service.exceptions.InvalidToken;
|
|
49
|
import org.dataone.service.exceptions.NotAuthorized;
|
|
50
|
import org.dataone.service.exceptions.NotFound;
|
|
51
|
import org.dataone.service.exceptions.NotImplemented;
|
|
52
|
import org.dataone.service.exceptions.ServiceFailure;
|
|
53
|
import org.dataone.service.exceptions.UnsupportedType;
|
|
54
|
import org.dataone.service.types.v1.Event;
|
|
55
|
import org.dataone.service.types.v1.Identifier;
|
|
56
|
import org.dataone.service.types.v1.ObjectFormatIdentifier;
|
|
57
|
import org.dataone.service.types.v1.SystemMetadata;
|
|
58
|
import org.xml.sax.SAXException;
|
|
59
|
|
|
60
|
import com.hazelcast.core.IMap;
|
|
61
|
import com.hazelcast.core.ISet;
|
|
62
|
|
|
63
|
import edu.ucsb.nceas.metacat.common.index.event.IndexEvent;
|
|
64
|
import edu.ucsb.nceas.metacat.index.event.EventlogFactory;
|
|
65
|
import edu.ucsb.nceas.metacat.index.event.IndexEventLogException;
|
|
66
|
|
|
67
|
|
|
68
|
/**
|
|
69
|
* A class represents the object to generate massive solr indexes.
|
|
70
|
* This can happen during an update of Metacat (generating index for all existing documents)
|
|
71
|
* or regenerate index for those documents
|
|
72
|
* failing to build index during the insert or update.
|
|
73
|
*
|
|
74
|
* @author tao
|
|
75
|
*
|
|
76
|
*/
|
|
77
|
public class IndexGenerator extends TimerTask {
|
|
78
|
|
|
79
|
private static final int FIRST =0;
|
|
80
|
private static final int SECOND =1;
|
|
81
|
private static final int THIRD = 2;
|
|
82
|
private static final int FOURTH = 3;
|
|
83
|
public static final int WAITTIME = 10000;
|
|
84
|
public static final int MAXWAITNUMBER = 180;
|
|
85
|
private static final String HTTP = "http://";
|
|
86
|
private static final String MNAPPENDIX = "/d1/mn";
|
|
87
|
private static final String RESOURCEMAPPROPERYNAME = "index.resourcemap.namespace";
|
|
88
|
public static final String WAITIMEPOPERTYNAME = "index.regenerate.start.waitingtime";
|
|
89
|
public static final String MAXATTEMPTSPROPERTYNAME = "index.regenerate.start.maxattempts";
|
|
90
|
|
|
91
|
private static int waitingTime = WAITTIME;
|
|
92
|
private static int maxAttempts = MAXWAITNUMBER;
|
|
93
|
|
|
94
|
private SolrIndex solrIndex = null;
|
|
95
|
//private SystemMetadataEventListener systemMetadataListener = null;
|
|
96
|
private IMap<Identifier, SystemMetadata> systemMetadataMap;
|
|
97
|
private IMap<Identifier, String> objectPathMap;
|
|
98
|
private Log log = LogFactory.getLog(IndexGenerator.class);
|
|
99
|
//private MNode mNode = null;
|
|
100
|
private static List<String> resourceMapNamespaces = null;
|
|
101
|
|
|
102
|
/**
|
|
103
|
* Constructor
|
|
104
|
* @param solrIndex
|
|
105
|
* @param systemMetadataListener
|
|
106
|
*/
|
|
107
|
public IndexGenerator(SolrIndex solrIndex) {
|
|
108
|
this.solrIndex = solrIndex;
|
|
109
|
resourceMapNamespaces = Settings.getConfiguration().getList(RESOURCEMAPPROPERYNAME);
|
|
110
|
//this.systemMetadataListener = systemMetadataListener;
|
|
111
|
//this.mNode = new MNode(buildMNBaseURL());
|
|
112
|
try {
|
|
113
|
waitingTime = Settings.getConfiguration().getInt(WAITIMEPOPERTYNAME);
|
|
114
|
maxAttempts = Settings.getConfiguration().getInt(MAXATTEMPTSPROPERTYNAME);
|
|
115
|
} catch (Exception e) {
|
|
116
|
log.warn("IndexGenerator.constructor - couldn't read the waiting time or maxattempts from the metacat.properties file since : "+e.getMessage()+". Default values will be used");
|
|
117
|
waitingTime = WAITTIME;
|
|
118
|
maxAttempts = MAXWAITNUMBER;
|
|
119
|
}
|
|
120
|
}
|
|
121
|
|
|
122
|
/**
|
|
123
|
* Build the index for all documents in Metacat without overwriting.
|
|
124
|
* @throws SolrServerException
|
|
125
|
* @throws ServiceFailure
|
|
126
|
* @throws NotImplemented
|
|
127
|
* @throws NotAuthorized
|
|
128
|
* @throws InvalidToken
|
|
129
|
* @throws InvalidRequest
|
|
130
|
* @throws IndexEventLogException
|
|
131
|
* @throws IllegalAccessException
|
|
132
|
* @throws InstantiationException
|
|
133
|
* @throws ClassNotFoundException
|
|
134
|
*/
|
|
135
|
/*public void indexAll() throws InvalidRequest, InvalidToken, NotAuthorized,
|
|
136
|
NotImplemented, ServiceFailure, SolrServerException, FileNotFoundException, ClassNotFoundException, InstantiationException, IllegalAccessException, IndexEventLogException {
|
|
137
|
boolean force = false;
|
|
138
|
indexAll(force);
|
|
139
|
}*/
|
|
140
|
|
|
141
|
/**
|
|
142
|
* Build the index for all documents.
|
|
143
|
* @throws SolrServerException
|
|
144
|
* @throws ServiceFailure
|
|
145
|
* @throws NotImplemented
|
|
146
|
* @throws NotAuthorized
|
|
147
|
* @throws InvalidToken
|
|
148
|
* @throws InvalidRequest
|
|
149
|
* @throws IndexEventLogException
|
|
150
|
* @throws IllegalAccessException
|
|
151
|
* @throws InstantiationException
|
|
152
|
* @throws ClassNotFoundException
|
|
153
|
* @throws ParserConfigurationException
|
|
154
|
* @throws SAXException
|
|
155
|
* @throws IOException
|
|
156
|
* @throws UnsupportedType
|
|
157
|
* @throws NotFound
|
|
158
|
* @throws XPathExpressionException
|
|
159
|
*/
|
|
160
|
public void indexAll() throws InvalidRequest, InvalidToken,
|
|
161
|
NotAuthorized, NotImplemented, ServiceFailure, SolrServerException, ClassNotFoundException, InstantiationException, IllegalAccessException, IndexEventLogException, XPathExpressionException, NotFound, UnsupportedType, IOException, SAXException, ParserConfigurationException {
|
|
162
|
Date since = null;
|
|
163
|
Date until = null;
|
|
164
|
index(since, until);
|
|
165
|
}
|
|
166
|
|
|
167
|
/**
|
|
168
|
* Build the index for the docs which have been modified since the specified date.
|
|
169
|
* @param since
|
|
170
|
* @throws SolrServerException
|
|
171
|
* @throws ServiceFailure
|
|
172
|
* @throws NotImplemented
|
|
173
|
* @throws NotAuthorized
|
|
174
|
* @throws InvalidToken
|
|
175
|
* @throws InvalidRequest
|
|
176
|
* @throws IndexEventLogException
|
|
177
|
* @throws IllegalAccessException
|
|
178
|
* @throws InstantiationException
|
|
179
|
* @throws ClassNotFoundException
|
|
180
|
* @throws ParserConfigurationException
|
|
181
|
* @throws SAXException
|
|
182
|
* @throws IOException
|
|
183
|
* @throws UnsupportedType
|
|
184
|
* @throws NotFound
|
|
185
|
* @throws XPathExpressionException
|
|
186
|
*/
|
|
187
|
public void index(Date since) throws InvalidRequest, InvalidToken,
|
|
188
|
NotAuthorized, NotImplemented, ServiceFailure, SolrServerException, ClassNotFoundException, InstantiationException, IllegalAccessException, IndexEventLogException, XPathExpressionException, NotFound, UnsupportedType, IOException, SAXException, ParserConfigurationException {
|
|
189
|
Date until = null;
|
|
190
|
index(since, until);
|
|
191
|
}
|
|
192
|
|
|
193
|
/**
|
|
194
|
* Build the index for the docs which have been modified between the specified date.s
|
|
195
|
* @param since
|
|
196
|
* @param until
|
|
197
|
* @throws SolrServerException
|
|
198
|
* @throws ServiceFailure
|
|
199
|
* @throws NotImplemented
|
|
200
|
* @throws NotAuthorized
|
|
201
|
* @throws InvalidToken
|
|
202
|
* @throws InvalidRequest
|
|
203
|
* @throws IndexEventLogException
|
|
204
|
* @throws IllegalAccessException
|
|
205
|
* @throws InstantiationException
|
|
206
|
* @throws ClassNotFoundException
|
|
207
|
* @throws ParserConfigurationException
|
|
208
|
* @throws SAXException
|
|
209
|
* @throws IOException
|
|
210
|
* @throws UnsupportedType
|
|
211
|
* @throws NotFound
|
|
212
|
* @throws XPathExpressionException
|
|
213
|
*/
|
|
214
|
public void index(Date since, Date until) throws SolrServerException, InvalidRequest,
|
|
215
|
InvalidToken, NotAuthorized, NotImplemented, ServiceFailure, ClassNotFoundException, InstantiationException, IllegalAccessException, IndexEventLogException, XPathExpressionException, NotFound, UnsupportedType, IOException, SAXException, ParserConfigurationException {
|
|
216
|
Date processedDate = null;
|
|
217
|
List<String> solrIds = null;
|
|
218
|
initSystemMetadataMap();
|
|
219
|
initObjectPathMap();
|
|
220
|
List[] metacatIds = getMetacatIds(since, until);
|
|
221
|
List<String> otherMetacatIds = metacatIds[FIRST];
|
|
222
|
List<String> resourceMapIds = metacatIds[SECOND];
|
|
223
|
List<String> otherDeletedMetacatIds = metacatIds[THIRD];
|
|
224
|
List<String> resourceMapDeletedIds = metacatIds[FOURTH];
|
|
225
|
|
|
226
|
//figure out the procesedDate by comparing the last element of otherMetacatIds and resourceMapIds.
|
|
227
|
List<Long> maxCollection = new ArrayList<Long>();
|
|
228
|
Date latestOtherId = null;
|
|
229
|
if (otherMetacatIds != null && !otherMetacatIds.isEmpty()) {
|
|
230
|
int size = otherMetacatIds.size();
|
|
231
|
String id = otherMetacatIds.get(size-1);
|
|
232
|
SystemMetadata sysmeta = getSystemMetadata(id);
|
|
233
|
latestOtherId = sysmeta.getDateSysMetadataModified();
|
|
234
|
maxCollection.add(new Long(latestOtherId.getTime()));
|
|
235
|
}
|
|
236
|
|
|
237
|
Date latestDeletedOtherIds = null;
|
|
238
|
if (otherDeletedMetacatIds != null && !otherDeletedMetacatIds.isEmpty()) {
|
|
239
|
int size = otherDeletedMetacatIds.size();
|
|
240
|
String id = otherDeletedMetacatIds.get(size-1);
|
|
241
|
SystemMetadata sysmeta = getSystemMetadata(id);
|
|
242
|
latestDeletedOtherIds = sysmeta.getDateSysMetadataModified();
|
|
243
|
maxCollection.add(new Long(latestDeletedOtherIds.getTime()));
|
|
244
|
}
|
|
245
|
|
|
246
|
Date latestResourceId = null;
|
|
247
|
if (resourceMapIds != null && !resourceMapIds.isEmpty()) {
|
|
248
|
int size = resourceMapIds.size();
|
|
249
|
String id = resourceMapIds.get(size-1);
|
|
250
|
SystemMetadata sysmeta = getSystemMetadata(id);
|
|
251
|
latestResourceId = sysmeta.getDateSysMetadataModified();
|
|
252
|
maxCollection.add(new Long(latestResourceId.getTime()));
|
|
253
|
}
|
|
254
|
|
|
255
|
Date latestDeletedResourceId = null;
|
|
256
|
if(resourceMapDeletedIds != null && !resourceMapDeletedIds.isEmpty()) {
|
|
257
|
int size = resourceMapDeletedIds.size();
|
|
258
|
String id = resourceMapDeletedIds.get(size-1);
|
|
259
|
SystemMetadata sysmeta = getSystemMetadata(id);
|
|
260
|
latestDeletedResourceId = sysmeta.getDateSysMetadataModified();
|
|
261
|
maxCollection.add(new Long(latestDeletedResourceId.getTime()));
|
|
262
|
}
|
|
263
|
|
|
264
|
if(!maxCollection.isEmpty()) {
|
|
265
|
Long max = Collections.max(maxCollection);
|
|
266
|
processedDate = new Date(max.longValue());
|
|
267
|
}
|
|
268
|
/*if(latestOtherId != null && latestResourceId != null && latestOtherId.getTime() > latestResourceId.getTime()) {
|
|
269
|
processedDate = latestOtherId;
|
|
270
|
} else if (latestOtherId != null && latestResourceId != null && latestOtherId.getTime() <= latestResourceId.getTime()) {
|
|
271
|
processedDate = latestResourceId;
|
|
272
|
} else if (latestOtherId == null && latestResourceId != null) {
|
|
273
|
processedDate = latestResourceId;
|
|
274
|
} else if (latestOtherId != null && latestResourceId == null) {
|
|
275
|
processedDate = latestOtherId;
|
|
276
|
}*/
|
|
277
|
|
|
278
|
|
|
279
|
//add the failedPids
|
|
280
|
List<IndexEvent> failedEvents = EventlogFactory.createIndexEventLog().getEvents(null, null, null, null);
|
|
281
|
List<IndexEvent> failedOtherIds = new ArrayList<IndexEvent>();
|
|
282
|
List<IndexEvent> failedResourceMapIds = new ArrayList<IndexEvent>();
|
|
283
|
if(failedEvents != null) {
|
|
284
|
for(IndexEvent event : failedEvents) {
|
|
285
|
String id = event.getIdentifier().getValue();
|
|
286
|
SystemMetadata sysmeta = getSystemMetadata(id);
|
|
287
|
if(sysmeta != null) {
|
|
288
|
ObjectFormatIdentifier formatId =sysmeta.getFormatId();
|
|
289
|
if(formatId != null && formatId.getValue() != null && resourceMapNamespaces != null && isResourceMap(formatId)) {
|
|
290
|
failedResourceMapIds.add(event);
|
|
291
|
} else {
|
|
292
|
failedOtherIds.add(event);
|
|
293
|
}
|
|
294
|
}
|
|
295
|
}
|
|
296
|
}
|
|
297
|
indexFailedIds(failedOtherIds);
|
|
298
|
indexFailedIds(failedResourceMapIds);
|
|
299
|
|
|
300
|
/*if(!failedOtherIds.isEmpty()) {
|
|
301
|
failedOtherIds.addAll(otherMetacatIds);
|
|
302
|
} else {
|
|
303
|
failedOtherIds = otherMetacatIds;
|
|
304
|
}
|
|
305
|
|
|
306
|
if(!failedResourceMapIds.isEmpty()) {
|
|
307
|
failedResourceMapIds.addAll(resourceMapIds);
|
|
308
|
} else {
|
|
309
|
failedResourceMapIds = resourceMapIds;
|
|
310
|
}*/
|
|
311
|
|
|
312
|
log.info("the metacat ids (except the resource map ids)-----------------------------"+otherMetacatIds);
|
|
313
|
log.info("the deleted metacat ids (except the resource map ids)-----------------------------"+otherDeletedMetacatIds);
|
|
314
|
log.info("the metacat resroucemap ids -----------------------------"+resourceMapIds);
|
|
315
|
log.info("the deleted metacat resroucemap ids -----------------------------"+resourceMapDeletedIds);
|
|
316
|
index(otherMetacatIds);
|
|
317
|
removeIndex(otherDeletedMetacatIds);
|
|
318
|
index(resourceMapIds);
|
|
319
|
removeIndex(resourceMapDeletedIds);
|
|
320
|
|
|
321
|
//record the timed index.
|
|
322
|
if(processedDate != null) {
|
|
323
|
EventlogFactory.createIndexEventLog().setLastProcessDate(processedDate);
|
|
324
|
}
|
|
325
|
|
|
326
|
}
|
|
327
|
|
|
328
|
/*
|
|
329
|
* Doing index
|
|
330
|
*/
|
|
331
|
private void index(List<String> metacatIds) {
|
|
332
|
if(metacatIds != null) {
|
|
333
|
for(String metacatId : metacatIds) {
|
|
334
|
if(metacatId != null) {
|
|
335
|
try {
|
|
336
|
generateIndex(metacatId);
|
|
337
|
} catch (Exception e) {
|
|
338
|
IndexEvent event = new IndexEvent();
|
|
339
|
Identifier pid = new Identifier();
|
|
340
|
pid.setValue(metacatId);
|
|
341
|
event.setIdentifier(pid);
|
|
342
|
event.setDate(Calendar.getInstance().getTime());
|
|
343
|
event.setAction(Event.CREATE);
|
|
344
|
String error = "IndexGenerator.index - Metacat Index couldn't generate the index for the id - "+metacatId+" because "+e.getMessage();
|
|
345
|
event.setDescription(error);
|
|
346
|
try {
|
|
347
|
EventlogFactory.createIndexEventLog().write(event);
|
|
348
|
} catch (Exception ee) {
|
|
349
|
log.error("SolrIndex.insertToIndex - IndexEventLog can't log the index inserting event :"+ee.getMessage());
|
|
350
|
}
|
|
351
|
log.error(error);
|
|
352
|
}
|
|
353
|
|
|
354
|
|
|
355
|
}
|
|
356
|
}
|
|
357
|
}
|
|
358
|
}
|
|
359
|
|
|
360
|
/*
|
|
361
|
* Index those ids which failed in the process (We got them from the EventLog)
|
|
362
|
*/
|
|
363
|
private void indexFailedIds(List<IndexEvent> events) {
|
|
364
|
if(events != null) {
|
|
365
|
for(IndexEvent event : events) {
|
|
366
|
if(event != null) {
|
|
367
|
Identifier identifier = event.getIdentifier();
|
|
368
|
if(identifier != null) {
|
|
369
|
String id = identifier.getValue();
|
|
370
|
if(id != null) {
|
|
371
|
Event action = event.getAction();
|
|
372
|
if (action != null && action.equals(Event.CREATE)) {
|
|
373
|
try {
|
|
374
|
generateIndex(id);
|
|
375
|
EventlogFactory.createIndexEventLog().remove(identifier);
|
|
376
|
} catch (Exception e) {
|
|
377
|
log.error("IndexGenerator.indexFailedIds - Metacat Index couldn't generate the index for the id - "+id+" because "+e.getMessage());
|
|
378
|
}
|
|
379
|
} else if (action != null && action.equals(Event.DELETE)) {
|
|
380
|
try {
|
|
381
|
removeIndex(id);
|
|
382
|
EventlogFactory.createIndexEventLog().remove(identifier);
|
|
383
|
} catch (Exception e) {
|
|
384
|
log.error("IndexGenerator.indexFailedIds - Metacat Index couldn't remove the index for the id - "+id+" because "+e.getMessage());
|
|
385
|
}
|
|
386
|
}
|
|
387
|
}
|
|
388
|
}
|
|
389
|
}
|
|
390
|
}
|
|
391
|
}
|
|
392
|
}
|
|
393
|
|
|
394
|
public void run() {
|
|
395
|
/*IndexEvent event = new IndexEvent();
|
|
396
|
event.setDate(Calendar.getInstance().getTime());
|
|
397
|
event.setType(IndexEvent.STARTTIMEDINDEX);
|
|
398
|
event.setDescription("Start the timed index job");
|
|
399
|
try {
|
|
400
|
EventlogFactory.createIndexEventLog().write(event);
|
|
401
|
} catch (Exception e) {
|
|
402
|
log.error("IndexGenerator.run - IndexEventLog can't log the timed indexing start event :"+e.getMessage());
|
|
403
|
}*/
|
|
404
|
try {
|
|
405
|
Date since = EventlogFactory.createIndexEventLog().getLastProcessDate();
|
|
406
|
index(since);
|
|
407
|
} catch (InvalidRequest e) {
|
|
408
|
// TODO Auto-generated catch block
|
|
409
|
//e.printStackTrace();
|
|
410
|
log.error("IndexGenerator.run - Metadata-Index couldn't generate indexes for those documents which haven't been indexed : "+e.getMessage());
|
|
411
|
} catch (InvalidToken e) {
|
|
412
|
// TODO Auto-generated catch block
|
|
413
|
//e.printStackTrace();
|
|
414
|
log.error("IndexGenerator.run - Metadata-Index couldn't generate indexes for those documents which haven't been indexed : "+e.getMessage());
|
|
415
|
} catch (NotAuthorized e) {
|
|
416
|
// TODO Auto-generated catch block
|
|
417
|
//e.printStackTrace();
|
|
418
|
} catch (NotImplemented e) {
|
|
419
|
// TODO Auto-generated catch block
|
|
420
|
//e.printStackTrace();
|
|
421
|
log.error("IndexGenerator.run - Metadata-Index couldn't generate indexes for those documents which haven't been indexed : "+e.getMessage());
|
|
422
|
} catch (ServiceFailure e) {
|
|
423
|
// TODO Auto-generated catch block
|
|
424
|
//e.printStackTrace();
|
|
425
|
log.error("IndexGenerator.run - Metadata-Index couldn't generate indexes for those documents which haven't been indexed : "+e.getMessage());
|
|
426
|
} catch (SolrServerException e) {
|
|
427
|
// TODO Auto-generated catch block
|
|
428
|
//e.printStackTrace();
|
|
429
|
log.error("IndexGenerator.run - Metadata-Index couldn't generate indexes for those documents which haven't been indexed : "+e.getMessage());
|
|
430
|
} catch (FileNotFoundException e) {
|
|
431
|
log.error("IndexGenerator.run - Metadata-Index couldn't generate indexes for those documents which haven't been indexed : "+e.getMessage());
|
|
432
|
}
|
|
433
|
/*event.setDate(Calendar.getInstance().getTime());
|
|
434
|
event.setType(IndexEvent.FINISHTIMEDINDEX);
|
|
435
|
event.setDescription("Finish the timed index job");
|
|
436
|
try {
|
|
437
|
EventlogFactory.createIndexEventLog().write(event);
|
|
438
|
} catch (Exception e) {
|
|
439
|
log.error("IndexGenerator.run - IndexEventLog can't log the timed indexing finish event :"+e.getMessage());
|
|
440
|
}*/ catch (ClassNotFoundException e) {
|
|
441
|
// TODO Auto-generated catch block
|
|
442
|
log.error("IndexGenerator.run - Metadata-Index couldn't generate indexes for those documents which haven't been indexed : "+e.getMessage());
|
|
443
|
} catch (InstantiationException e) {
|
|
444
|
// TODO Auto-generated catch block
|
|
445
|
log.error("IndexGenerator.run - Metadata-Index couldn't generate indexes for those documents which haven't been indexed : "+e.getMessage());
|
|
446
|
} catch (IllegalAccessException e) {
|
|
447
|
// TODO Auto-generated catch block
|
|
448
|
log.error("IndexGenerator.run - Metadata-Index couldn't generate indexes for those documents which haven't been indexed : "+e.getMessage());
|
|
449
|
} catch (IndexEventLogException e) {
|
|
450
|
// TODO Auto-generated catch block
|
|
451
|
log.error("IndexGenerator.run - Metadata-Index couldn't generate indexes for those documents which haven't been indexed : "+e.getMessage());
|
|
452
|
} catch (XPathExpressionException e) {
|
|
453
|
// TODO Auto-generated catch block
|
|
454
|
log.error("IndexGenerator.run - Metadata-Index couldn't generate indexes for those documents which haven't been indexed : "+e.getMessage());
|
|
455
|
} catch (NotFound e) {
|
|
456
|
// TODO Auto-generated catch block
|
|
457
|
e.printStackTrace();
|
|
458
|
} catch (UnsupportedType e) {
|
|
459
|
// TODO Auto-generated catch block
|
|
460
|
log.error("IndexGenerator.run - Metadata-Index couldn't generate indexes for those documents which haven't been indexed : "+e.getMessage());
|
|
461
|
} catch (IOException e) {
|
|
462
|
// TODO Auto-generated catch block
|
|
463
|
log.error("IndexGenerator.run - Metadata-Index couldn't generate indexes for those documents which haven't been indexed : "+e.getMessage());
|
|
464
|
} catch (SAXException e) {
|
|
465
|
// TODO Auto-generated catch block
|
|
466
|
log.error("IndexGenerator.run - Metadata-Index couldn't generate indexes for those documents which haven't been indexed : "+e.getMessage());
|
|
467
|
} catch (ParserConfigurationException e) {
|
|
468
|
// TODO Auto-generated catch block
|
|
469
|
log.error("IndexGenerator.run - Metadata-Index couldn't generate indexes for those documents which haven't been indexed : "+e.getMessage());
|
|
470
|
}
|
|
471
|
}
|
|
472
|
|
|
473
|
/*
|
|
474
|
* Get the indexed ids list from the solr server.
|
|
475
|
* An empty list will be returned if there is no ids.
|
|
476
|
*/
|
|
477
|
private List<String> getSolrDocIds() throws SolrServerException {
|
|
478
|
List<String> ids = solrIndex.getSolrIds();
|
|
479
|
return ids;
|
|
480
|
}
|
|
481
|
|
|
482
|
/*
|
|
483
|
* Get an array of the list of ids of the metacat which has the systemmetadata modification in the range.
|
|
484
|
*
|
|
485
|
* If since and util are null, it will return all of them.
|
|
486
|
* The first element of the list is the ids except the resource map. The second elements of the list is the ids of the resource map.
|
|
487
|
* The reason to split them is when we index the resource map, we need the index of the documents in the resource map ready.
|
|
488
|
* The last element in the each list has the latest SystemMetadata modification date. But they are not sorted.
|
|
489
|
*/
|
|
490
|
private List[] getMetacatIds(Date since, Date until) throws InvalidRequest,
|
|
491
|
InvalidToken, NotAuthorized, NotImplemented, ServiceFailure, FileNotFoundException {
|
|
492
|
|
|
493
|
List<String> resourceMapIds = new ArrayList();
|
|
494
|
List<String> resourceMapDeletedIds = new ArrayList();
|
|
495
|
List<String> otherIds = new ArrayList();
|
|
496
|
List<String> otherDeletedIds = new ArrayList();
|
|
497
|
List[] ids = new List[4];
|
|
498
|
ids[FIRST]= otherIds;
|
|
499
|
ids[SECOND] = resourceMapIds;
|
|
500
|
ids[THIRD] = otherDeletedIds;
|
|
501
|
ids[FOURTH] = resourceMapDeletedIds;
|
|
502
|
ISet<Identifier> metacatIds = DistributedMapsFactory.getIdentifiersSet();
|
|
503
|
Date otherPreviousDate = null;
|
|
504
|
Date otherDeletedPreviousDate = null;
|
|
505
|
Date resourceMapPreviousDate = null;
|
|
506
|
Date resourceMapDeletedPreviousDate = null;
|
|
507
|
if(metacatIds != null) {
|
|
508
|
for(Identifier identifier : metacatIds) {
|
|
509
|
if(identifier != null && identifier.getValue() != null && !identifier.getValue().equals("")) {
|
|
510
|
SystemMetadata sysmeta = getSystemMetadata(identifier.getValue());
|
|
511
|
if(sysmeta != null) {
|
|
512
|
ObjectFormatIdentifier formatId =sysmeta.getFormatId();
|
|
513
|
//System.out.println("the object format id is "+formatId.getValue());
|
|
514
|
//System.out.println("the ============ resourcMapNamespaces"+resourceMapNamespaces);
|
|
515
|
boolean correctTimeRange = false;
|
|
516
|
Date sysDate = sysmeta.getDateSysMetadataModified();
|
|
517
|
if(since == null && until == null) {
|
|
518
|
correctTimeRange = true;
|
|
519
|
} else if (since != null && until == null) {
|
|
520
|
if(sysDate.getTime() > since.getTime()) {
|
|
521
|
correctTimeRange = true;
|
|
522
|
}
|
|
523
|
} else if (since == null && until != null) {
|
|
524
|
if(sysDate.getTime() < until.getTime()) {
|
|
525
|
correctTimeRange = true;
|
|
526
|
}
|
|
527
|
} else if (since != null && until != null) {
|
|
528
|
if(sysDate.getTime() > since.getTime() && sysDate.getTime() < until.getTime()) {
|
|
529
|
correctTimeRange = true;
|
|
530
|
}
|
|
531
|
}
|
|
532
|
if(correctTimeRange && formatId != null && formatId.getValue() != null && resourceMapNamespaces != null && isResourceMap(formatId)) {
|
|
533
|
//for the resource map
|
|
534
|
if(sysmeta.getArchived() || sysmeta.getObsoletedBy() != null) {
|
|
535
|
//archived ids
|
|
536
|
if(!resourceMapDeletedIds.isEmpty()) {
|
|
537
|
if(sysDate.getTime() > resourceMapDeletedPreviousDate.getTime()) {
|
|
538
|
resourceMapDeletedIds.add(identifier.getValue());//append to the end of the list if current is later than the previous one
|
|
539
|
resourceMapDeletedPreviousDate = sysDate;//reset resourceMapPreviousDate to the bigger one
|
|
540
|
} else {
|
|
541
|
int size = resourceMapDeletedIds.size();//
|
|
542
|
resourceMapDeletedIds.add(size -1, identifier.getValue());//keep the previous one at the end of the list.
|
|
543
|
}
|
|
544
|
} else {
|
|
545
|
resourceMapDeletedIds.add(identifier.getValue());
|
|
546
|
resourceMapDeletedPreviousDate = sysDate;//init resourcemapPreviousDate
|
|
547
|
}
|
|
548
|
} else {
|
|
549
|
// current ids
|
|
550
|
if(!resourceMapIds.isEmpty()) {
|
|
551
|
if(sysDate.getTime() > resourceMapPreviousDate.getTime()) {
|
|
552
|
resourceMapIds.add(identifier.getValue());//append to the end of the list if current is later than the previous one
|
|
553
|
resourceMapPreviousDate = sysDate;//reset resourceMapPreviousDate to the bigger one
|
|
554
|
} else {
|
|
555
|
int size = resourceMapIds.size();//
|
|
556
|
resourceMapIds.add(size -1, identifier.getValue());//keep the previous one at the end of the list.
|
|
557
|
}
|
|
558
|
} else {
|
|
559
|
resourceMapIds.add(identifier.getValue());
|
|
560
|
resourceMapPreviousDate = sysDate;//init resourcemapPreviousDate
|
|
561
|
}
|
|
562
|
}
|
|
563
|
} else if (correctTimeRange) {
|
|
564
|
if(sysmeta.getArchived() || sysmeta.getObsoletedBy() != null) {
|
|
565
|
//for the archived ids
|
|
566
|
if(!otherDeletedIds.isEmpty()) {
|
|
567
|
if(sysDate.getTime() > otherDeletedPreviousDate.getTime()) {
|
|
568
|
otherDeletedIds.add(identifier.getValue());
|
|
569
|
otherDeletedPreviousDate = sysDate;//reset otherDeletedPreviousDate to the bigger one
|
|
570
|
} else {
|
|
571
|
int size = otherDeletedIds.size();
|
|
572
|
otherDeletedIds.add(size-1, identifier.getValue());
|
|
573
|
}
|
|
574
|
} else {
|
|
575
|
otherDeletedIds.add(identifier.getValue());
|
|
576
|
otherDeletedPreviousDate = sysDate;//init otherDeletedPreviousDate
|
|
577
|
}
|
|
578
|
} else {
|
|
579
|
//for the current ids
|
|
580
|
if(!otherIds.isEmpty()) {
|
|
581
|
if(sysDate.getTime() > otherPreviousDate.getTime()) {
|
|
582
|
otherIds.add(identifier.getValue());
|
|
583
|
otherPreviousDate = sysDate;//reset otherPreviousDate to the bigger one
|
|
584
|
} else {
|
|
585
|
int size = otherIds.size();
|
|
586
|
otherIds.add(size-1, identifier.getValue());
|
|
587
|
}
|
|
588
|
} else {
|
|
589
|
otherIds.add(identifier.getValue());
|
|
590
|
otherPreviousDate = sysDate;//init otherPreviousDate
|
|
591
|
}
|
|
592
|
}
|
|
593
|
}
|
|
594
|
|
|
595
|
}
|
|
596
|
}
|
|
597
|
}
|
|
598
|
}
|
|
599
|
return ids;
|
|
600
|
}
|
|
601
|
|
|
602
|
/*
|
|
603
|
* If the specified ObjectFormatIdentifier is a resrouce map namespace.
|
|
604
|
*/
|
|
605
|
public static boolean isResourceMap(ObjectFormatIdentifier formatId) {
|
|
606
|
boolean isResourceMap = false;
|
|
607
|
if(formatId != null && resourceMapNamespaces != null) {
|
|
608
|
for(String namespace : resourceMapNamespaces) {
|
|
609
|
if(namespace != null && formatId.getValue() != null && !formatId.getValue().trim().equals("") && formatId.getValue().equals(namespace)) {
|
|
610
|
isResourceMap = true;
|
|
611
|
break;
|
|
612
|
}
|
|
613
|
}
|
|
614
|
}
|
|
615
|
return isResourceMap;
|
|
616
|
}
|
|
617
|
|
|
618
|
|
|
619
|
|
|
620
|
/*
|
|
621
|
* Generate index for the id.
|
|
622
|
*/
|
|
623
|
private void generateIndex(String id) throws Exception {
|
|
624
|
if(id != null) {
|
|
625
|
SystemMetadata sysmeta = getSystemMetadata(id);
|
|
626
|
//only update none-archived id.
|
|
627
|
if(sysmeta != null && !sysmeta.getArchived() && sysmeta.getObsoletedBy() == null) {
|
|
628
|
InputStream data = getDataObject(id);
|
|
629
|
Identifier obsolete = sysmeta.getObsoletes();
|
|
630
|
List<String> obsoleteChain = null;
|
|
631
|
if(obsolete != null) {
|
|
632
|
obsoleteChain = getObsoletes(id);
|
|
633
|
}
|
|
634
|
solrIndex.update(id, obsoleteChain, sysmeta, data);
|
|
635
|
} else {
|
|
636
|
throw new Exception("IndexGenerator.generate - there is no found SystemMetadata associated with the id "+id);
|
|
637
|
}
|
|
638
|
|
|
639
|
}
|
|
640
|
}
|
|
641
|
|
|
642
|
/*
|
|
643
|
* Remove the solr index for the list of ids
|
|
644
|
*/
|
|
645
|
private void removeIndex(List<String> ids) throws ServiceFailure, XPathExpressionException, NotImplemented, NotFound, UnsupportedType, IOException, SolrServerException, SAXException, ParserConfigurationException {
|
|
646
|
if(ids!= null) {
|
|
647
|
for(String id :ids) {
|
|
648
|
removeIndex(id);
|
|
649
|
}
|
|
650
|
}
|
|
651
|
}
|
|
652
|
|
|
653
|
/*
|
|
654
|
* Remove the index for the id
|
|
655
|
*/
|
|
656
|
private void removeIndex(String id) throws ServiceFailure, XPathExpressionException, NotImplemented, NotFound, UnsupportedType, IOException, SolrServerException, SAXException, ParserConfigurationException {
|
|
657
|
if(id != null) {
|
|
658
|
solrIndex.remove(id);
|
|
659
|
}
|
|
660
|
}
|
|
661
|
|
|
662
|
/*
|
|
663
|
* Initialize the system metadata map
|
|
664
|
*/
|
|
665
|
private void initSystemMetadataMap() throws FileNotFoundException, ServiceFailure{
|
|
666
|
int times = 0;
|
|
667
|
if(systemMetadataMap == null) {
|
|
668
|
systemMetadataMap = DistributedMapsFactory.getSystemMetadataMap();
|
|
669
|
/*while(true) {
|
|
670
|
try {
|
|
671
|
systemMetadataMap = DistributedMapsFactory.getSystemMetadataMap();
|
|
672
|
break;
|
|
673
|
} catch (FileNotFoundException e) {
|
|
674
|
throw e;
|
|
675
|
} catch (ServiceFailure e) {
|
|
676
|
if(times <= maxAttempts) {
|
|
677
|
log.warn("IndexGenerator.initSystemMetadataMap - the hazelcast service is not ready : "
|
|
678
|
+e.getMessage()+"\nWe will try to access it "+waitingTime/1000+" seconds later ");
|
|
679
|
try {
|
|
680
|
Thread.sleep(waitingTime);
|
|
681
|
} catch (Exception ee) {
|
|
682
|
log.warn("IndexGenerator.initSystemMetadataMap - the thread can't sleep for "+waitingTime/1000+" seconds to wait the hazelcast service");
|
|
683
|
}
|
|
684
|
|
|
685
|
} else {
|
|
686
|
throw new ServiceFailure("0000", "IndexGenerator.initSystemMetadataMap - the hazelcast service is not ready even though Metacat-index wailted for "+maxAttempts*waitingTime/1000+" seconds. We can't get the system metadata from it and the building index can't happen this time");
|
|
687
|
}
|
|
688
|
}
|
|
689
|
times++;
|
|
690
|
}*/
|
|
691
|
}
|
|
692
|
}
|
|
693
|
|
|
694
|
/*
|
|
695
|
* We should call this method after calling initSystemMetadataMap since this method doesn't have the mechanism to wait the readiness of the hazelcast service
|
|
696
|
*/
|
|
697
|
private void initObjectPathMap() throws FileNotFoundException, ServiceFailure {
|
|
698
|
if(objectPathMap == null) {
|
|
699
|
objectPathMap = DistributedMapsFactory.getObjectPathMap();
|
|
700
|
}
|
|
701
|
}
|
|
702
|
/**
|
|
703
|
* Get an InputStream as the data object for the specific pid.
|
|
704
|
* @param pid
|
|
705
|
* @return
|
|
706
|
* @throws FileNotFoundException
|
|
707
|
*/
|
|
708
|
private InputStream getDataObject(String pid) throws FileNotFoundException {
|
|
709
|
Identifier identifier = new Identifier();
|
|
710
|
identifier.setValue(pid);
|
|
711
|
String objectPath = objectPathMap.get(identifier);
|
|
712
|
InputStream data = null;
|
|
713
|
data = new FileInputStream(objectPath);
|
|
714
|
return data;
|
|
715
|
|
|
716
|
}
|
|
717
|
|
|
718
|
/**
|
|
719
|
* Get the SystemMetadata for the specified id from the distributed Map.
|
|
720
|
* The null maybe is returned if there is no system metadata found.
|
|
721
|
* @param id the specified id.
|
|
722
|
* @return the SystemMetadata associated with the id.
|
|
723
|
*/
|
|
724
|
private SystemMetadata getSystemMetadata(String id) {
|
|
725
|
SystemMetadata metadata = null;
|
|
726
|
if(systemMetadataMap != null && id != null) {
|
|
727
|
Identifier identifier = new Identifier();
|
|
728
|
identifier.setValue(id);
|
|
729
|
metadata = systemMetadataMap.get(identifier);
|
|
730
|
}
|
|
731
|
return metadata;
|
|
732
|
}
|
|
733
|
|
|
734
|
/**
|
|
735
|
* Get the obsoletes chain of the specified id. The returned list doesn't include
|
|
736
|
* the specified id itself. The newer version has the lower index number in the list.
|
|
737
|
* Empty list will be returned if there is no document to be obsoleted by this id.
|
|
738
|
* @param id
|
|
739
|
* @return
|
|
740
|
*/
|
|
741
|
private List<String> getObsoletes(String id) {
|
|
742
|
List<String> obsoletes = new ArrayList<String>();
|
|
743
|
while (id != null) {
|
|
744
|
SystemMetadata metadata = getSystemMetadata(id);
|
|
745
|
id = null;//set it to be null in order to stop the while loop if the id can't be assinged to a new value in the following code.
|
|
746
|
if(metadata != null) {
|
|
747
|
Identifier identifier = metadata.getObsoletes();
|
|
748
|
if(identifier != null && identifier.getValue() != null && !identifier.getValue().trim().equals("")) {
|
|
749
|
obsoletes.add(identifier.getValue());
|
|
750
|
id = identifier.getValue();
|
|
751
|
}
|
|
752
|
}
|
|
753
|
}
|
|
754
|
return obsoletes;
|
|
755
|
}
|
|
756
|
|
|
757
|
/**
|
|
758
|
* Overwrite and do nothing
|
|
759
|
*/
|
|
760
|
public boolean cancel() {
|
|
761
|
return true;
|
|
762
|
}
|
|
763
|
|
|
764
|
}
|