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<%@ page    language="java" %>
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<%
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/**
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 *  '$RCSfile$'
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 *      Authors: Matt Jones
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 *    Copyright: 2008 Regents of the University of California and the
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 *               National Center for Ecological Analysis and Synthesis
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 *  For Details: http://www.nceas.ucsb.edu/
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 *
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 *   '$Author: leinfelder $'
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 *     '$Date: 2013-05-08 22:14:36 -0700 (Wed, 08 May 2013) $'
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 * '$Revision: 7678 $'
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 * 
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 * This is an HTML document for displaying metadata catalog tools
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 *
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 * This program is free software; you can redistribute it and/or modify
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 * it under the terms of the GNU General Public License as published by
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 * the Free Software Foundation; either version 2 of the License, or
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 * (at your option) any later version.
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 *
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 * This program is distributed in the hope that it will be useful,
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 * but WITHOUT ANY WARRANTY; without even the implied warranty of
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 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
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 * GNU General Public License for more details.
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 *
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 * You should have received a copy of the GNU General Public License
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 * along with this program; if not, write to the Free Software
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 * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
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 */
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%>
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<%@ include file="../../common/common-settings.jsp"%>
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<%@ include file="../../common/configure-check.jsp"%>
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<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
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<html>
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<head>
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<title>OBFS Data Registry</title>
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  <link rel="stylesheet" type="text/css" 
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        href="<%=STYLE_SKINS_URL%>/obfs/obfs.css"></link>
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  <script language="JavaScript" type="text/JavaScript"
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          src="<%=STYLE_SKINS_URL%>/obfs/obfs.js"></script>
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  <script language="JavaScript" type="text/JavaScript"
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          src="<%=STYLE_COMMON_URL%>/branding.js"></script>
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  <script language="Javascript">
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		function encodeXML(theString) {
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			return theString.replace(/&/g, '&amp;')
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				.replace(/</g, '&lt;')
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				.replace(/>/g, '&gt;')
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				.replace(/"/g, '&quot;');
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		}
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        function trim(stringToTrim) {
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                return stringToTrim.replace(/^\s*/, '').replace(/\s*$/,'');
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        }
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        function checkSearch(submitFormObj) {
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        	var searchString = trim(submitFormObj.searchstring.value);
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    		searchString = encodeXML(searchString);
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			var checkBox = document.getElementById("searchAll");
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                if (searchString=="") {
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                       if (confirm("Show *all* data?")) {
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            			searchString = "%";
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          		} else {
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            			return false;
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          		}
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                }
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                if(!checkBox.checked && searchString!="%"){
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                        submitFormObj.query.value = "<pathquery version=\"1.2\">"
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                                                           +"<querytitle>Web-Search</querytitle>"
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                                                           +"<returndoctype>eml://ecoinformatics.org/eml-2.1.1</returndoctype>"
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                                                           +"<returndoctype>eml://ecoinformatics.org/eml-2.1.0</returndoctype>"
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                                                           +"<returndoctype>eml://ecoinformatics.org/eml-2.0.1</returndoctype>"
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                                                           +"<returndoctype>eml://ecoinformatics.org/eml-2.0.0</returndoctype>"
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                                                           +"<returndoctype>-//ecoinformatics.org//eml-dataset-2.0.0beta6//EN</returndoctype>"
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                                                           +"<returndoctype>-//ecoinformatics.org//eml-dataset-2.0.0beta4//EN</returndoctype>"
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                                                           +"<returndoctype>-//NCEAS//resource//EN</returndoctype>"
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                                                           +"<returndoctype>-//NCEAS//eml-dataset//EN</returndoctype>"
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                                                           +"<returnfield>originator/individualName/surName</returnfield>"
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                                                           +"<returnfield>originator/individualName/givenName</returnfield>"
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                                                           +"<returnfield>creator/individualName/surName</returnfield>"
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                                                           +"<returnfield>creator/individualName/givenName</returnfield>"
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                                                           +"<returnfield>originator/organizationName</returnfield>"
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                                                           +"<returnfield>creator/organizationName</returnfield>"
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                                                           +"<returnfield>dataset/title/value</returnfield>"
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                                                           +"<returnfield>dataset/title</returnfield>"
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                                                           +"<returnfield>keyword</returnfield>"
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                                                           +"<returnfield>keyword/value</returnfield>"
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                                                           +"<querygroup operator=\"INTERSECT\">"
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                                                                +"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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                                                                        +"<value>Organization of Biological Field Stations</value>"
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                                                                        +"<pathexpr>organizationName</pathexpr>"
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                                                                +"</queryterm>"
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                                                                +"<querygroup operator=\"UNION\">"
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                                                                        +"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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                                                                                +"<value>" + searchString + "</value>"
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                                                                                +"<pathexpr>surName</pathexpr>"
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                                                                        +"</queryterm>"
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                                                                        +"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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                                                                                +"<value>" + searchString + "</value>"
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                                                                                +"<pathexpr>givenName</pathexpr>"
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                                                                        +"</queryterm>"
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                                                                        +"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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                                                                                +"<value>" + searchString + "</value>"
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                                                                                +"<pathexpr>keyword</pathexpr>"
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                                                                        +"</queryterm>"
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                                                                        +"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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                                                                                +"<value>" + searchString + "</value>"
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                                                                                +"<pathexpr>keyword/value</pathexpr>"
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                                                                        +"</queryterm>"
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                                                                        +"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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                                                                                +"<value>" + searchString + "</value>"
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																				+"<pathexpr>para</pathexpr>"
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                                                                        +"</queryterm>"
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                                                                        +"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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                                                                                +"<value>" + searchString + "</value>"
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                                                                                +"<pathexpr>geographicDescription</pathexpr>"
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                                                                        +"</queryterm>"
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                                                                        +"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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                                                                                +"<value>" + searchString + "</value>"
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                                                                                +"<pathexpr>literalLayout</pathexpr>"
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                                                                        +"</queryterm>"
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                                                                        +"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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                                                                                +"<value>" + searchString + "</value>"
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                                                                                +"<pathexpr>dataset/title</pathexpr>"
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                                                                        +"</queryterm>"
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                                                                        +"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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                                                                                +"<value>" + searchString + "</value>"
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                                                                                +"<pathexpr>dataset/title/value</pathexpr>"
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                                                                        +"</queryterm>"
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                                                                        +"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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                                                                                +"<value>" + searchString + "</value>"
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                                                                                +"<pathexpr>@packageId</pathexpr>"
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                                                                        +"</queryterm>"
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                                                                        +"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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                                                                                +"<value>" + searchString + "</value>"
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                                                                                +"<pathexpr>abstract/para</pathexpr>"
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                                                                        +"</queryterm>"
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                                                                        +"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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                                                                                +"<value>" + searchString + "</value>"
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                                                                                +"<pathexpr>abstract/para/value</pathexpr>"
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                                                                        +"</queryterm>"
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                                                                +"</querygroup>"
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                                                          +"</querygroup>"
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                                                  +"</pathquery>";
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                } else {
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                        queryTermString = "";
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                        if(searchString != "%"){
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                                queryTermString = "<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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                                                        +"<value>" + searchString + "</value>"
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                                                 +"</queryterm>";
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                        }
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                        submitFormObj.query.value = "<pathquery version=\"1.2\">"
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                                                           +"<querytitle>Web-Search</querytitle>"
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                                                           +"<returndoctype>eml://ecoinformatics.org/eml-2.1.1</returndoctype>"
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                                                           +"<returndoctype>eml://ecoinformatics.org/eml-2.1.0</returndoctype>"
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                                                           +"<returndoctype>eml://ecoinformatics.org/eml-2.0.1</returndoctype>"
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                                                           +"<returndoctype>eml://ecoinformatics.org/eml-2.0.0</returndoctype>"
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                                                           +"<returndoctype>-//ecoinformatics.org//eml-dataset-2.0.0beta6//EN</returndoctype>"
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                                                           +"<returndoctype>-//ecoinformatics.org//eml-dataset-2.0.0beta4//EN</returndoctype>"
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                                                           +"<returndoctype>-//NCEAS//resource//EN</returndoctype>"
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                                                           +"<returndoctype>-//NCEAS//eml-dataset//EN</returndoctype>"
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                                                           +"<returnfield>originator/individualName/surName</returnfield>"
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                                                           +"<returnfield>originator/individualName/givenName</returnfield>"
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                                                           +"<returnfield>creator/individualName/surName</returnfield>"
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                                                           +"<returnfield>creator/individualName/givenName</returnfield>"
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                                                           +"<returnfield>originator/organizationName</returnfield>"
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                                                           +"<returnfield>creator/organizationName</returnfield>"
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                                                           +"<returnfield>dataset/title</returnfield>"
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                                                           +"<returnfield>dataset/title/value</returnfield>"
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                                                           +"<returnfield>keyword</returnfield>"
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                                                           +"<returnfield>keyword/value</returnfield>"
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                                                           +"<querygroup operator=\"INTERSECT\">"
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                                                                +"<queryterm searchmode=\"contains\" casesensitive=\"false\">"
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                                                                        +"<value>Organization of Biological Field Stations</value>"
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                                                                        +"<pathexpr>organizationName</pathexpr>"
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                                                                +"</queryterm>"
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                                                                + queryTermString
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                                                           +"</querygroup>"
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                                                    +"</pathquery>";
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                }
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                return true;
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        }
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        function searchAll(){
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                var checkBox = document.getElementById("searchCheckBox");
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                if(checkBox.checked == true){
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                        alert("You have selected to search all possible existing fields. This search will take longer.");
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                }
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        }
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  </script>
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</head>
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<body>
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      <script language="JavaScript">
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          insertTemplateOpening("<%=CONTEXT_URL%>");
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          insertSearchBox("<%=CONTEXT_URL%>");
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      </script>
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<table width="760" border="0" cellspacing="0" cellpadding="0">
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  <tr><td colspan="5">
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<p>
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Welcome to the OBFS Data Registry. This is the primary source for
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comprehensive information about scientific and research data sets collected
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within or under the auspices of the Organization of Biological Field Stations.
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</p>
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</td></tr>
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<tr><td colspan="5">
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<p>This project is a cooperative effort of <a href="http://www.obfs.org">OBFS</a>, 
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the <a href="http://www.nceas.ucsb.edu">National Center for 
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Ecological Analysis and Synthesis (NCEAS)</a>, the 
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<a href="http://nrs.ucop.edu">UC Natural Reserve System</a>, and the 
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<a href="http://www.lternet.edu">LTER Network Office</a>.
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The Data Registry is based on software developed by the
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<a href="http://knb.ecoinformatics.org">Knowledge Network for 
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Biocomplexity (KNB)</a>, and
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houses metadata that are compliant with 
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<a href="http://knb.ecoinformatics.org/software/eml/">Ecological Metadata 
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Language (EML)</a>.
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</p>
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</td></tr>
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<tr><td colspan="5">
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<p>
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Credit for the data sets in this registry goes to the investigators who
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collected the data, and also to the OBFS sites and system for providing 
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an effective and pleasant environment for research and education at 
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the individual research stations.
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Our particular thanks go out to the OBFS reserve managers, scientists,
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and stewards for their comments and continuing support.
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</p>
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</td></tr>
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<tr><td colspan="5">
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<p><b>Registry Tools</b></p>
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<p>
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<menu>
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<li><span class="searchbox"><a name="search"> Search for Data Sets</a></span><br />
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    <menu>
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<form method="POST" action="<%=SERVLET_URL%>" target="_top" onSubmit="return checkSearch(this)">
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  <input value="UNION" name="operator" type="hidden">
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  &nbsp;<input size="14" name="searchstring" type="text" value="" id="searchBox">
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  <input name="query" type="hidden"/>
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  <input name="qformat" value="obfs" type="hidden">
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  <input name="enableediting" value="true" type="hidden">
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  <input type="hidden" name="action" value="squery">
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  <input value="Search" type="submit">
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</form>
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<form>
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  <input name="search" type="radio" checked><span class="text_plain"> Search Title, Abstract, Keywords, Personnel (Quicker)</span></input><br>
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  <input name="search" type="radio" id="searchAll"><span class="text_plain"> Search all fields (Slower)</span></input><br>
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</form>
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      This tool allows you to search the registry for data
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      sets of interest. When you type text in the box and
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      click on the "Search" button, the search will only
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      be conducted within the title, author, abstract,
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      and keyword fields. Checking the "Search All Fields"
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      box will search on these and all other existing
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      fields (this search will take more time).
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     <br><br>
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      You can use the '%' character as a wildcard in your
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      searches (e.g., '%biodiversity%' would locate any
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      phrase with the word biodiversity embedded within it).
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      </menu>
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    <br><br>
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  </li>
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  <li><a href="<%=SERVLET_URL%>?action=query&amp;operator=INTERSECT&amp;anyfield=%25&amp;organizationName=Organization%20of%20Biological%20Field%20Stations&amp;qformat=obfs&amp;enableediting=true&amp;returndoctype=eml://ecoinformatics.org/eml-2.1.1&amp;returndoctype=eml://ecoinformatics.org/eml-2.1.0&amp;returndoctype=eml://ecoinformatics.org/eml-2.0.1&amp;returndoctype=eml://ecoinformatics.org/eml-2.0.0&amp;returndoctype=-//ecoinformatics.org//eml-dataset-2.0.0beta6//EN&amp;returndoctype=-//ecoinformatics.org//eml-dataset-2.0.0beta4//EN&amp;returnfield=dataset/title&amp;returnfield=keyword&amp;returnfield=originator/individualName/surName&amp;returnfield=creator/individualName/surName&amp;returnfield=originator/organizationName&amp;returnfield=creator/organizationName">Browse existing OBFS data sets</a><br />
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    <menu>
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      The registry search system is used to locate data sets of interest
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      by searching through existing registered data sets.  
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      Presently the search covers all fields, including
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      author, title, abstract, keywords, and other documentation
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      for each dataset.  (More sophisticated search capabilities, 
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      including boolean field searches, will be available in future.)
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    </menu>
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  </li>
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  <p>&nbsp;</p>
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  <li><a href="<%=CGI_URL%>/register-dataset.cgi?cfg=obfs">Register a new OBFS 
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       data set</a><br />
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    <menu>
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      The registration page is used to submit information about a <b>new</b>
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      data set associated with OBFS research.  The documentation about the
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      data set will be reviewed and then submitted to the Registry.
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    </menu>
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  </li>
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  <p>&nbsp;</p>
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  <li>
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      <a href="map.jsp"> View Interactive Map </a>
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      <menu> View and query the geographic coverages of the data sets. </menu>
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  </li>
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</menu>
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</p>
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  </td></tr>
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</table>
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<p>&nbsp;</p>
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<script language="JavaScript">          
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    insertTemplateClosing("<%=CONTEXT_URL%>");
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</script>
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</body>
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</html>
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