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/*
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 * NOTE: Not restoring any documents that were archived by the CN
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 * because we do not know of any Oracle-based MNs
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 */
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/* Ensure ALL previous revisions of docids 
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 * that have been obsoleted_by something else
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 * do not also have archived=true flag set
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 * (Avoids encountering this issue again)
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 */
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/* Check the numbers in xml_revisions
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 */
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/*
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SELECT count(id.guid)
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FROM xml_revisions x,
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	identifier id,
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	systemMetadata sm
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WHERE x.docid = id.docid
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AND x.rev = id.rev
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AND id.guid = sm.guid
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AND sm.obsoleted_by IS NOT null
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AND sm.archived = 'true';
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*/
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/*Do the update on xml_revisions
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 */
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UPDATE systemMetadata sm
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SET archived = false
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FROM xml_revisions x,
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	identifier id
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WHERE x.docid = id.docid
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AND x.rev = id.rev
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AND id.guid = sm.guid
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AND sm.obsoleted_by IS NOT null
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AND sm.archived = 'true';
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/** 
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 * Check numbers in xml_documents
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 */
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/*
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SELECT count(id.guid)
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FROM xml_documents x,
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	identifier id,
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	systemMetadata sm
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WHERE x.docid = id.docid
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AND x.rev = id.rev
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AND id.guid = sm.guid
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AND sm.obsoleted_by IS NOT null
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AND sm.archived = 'true';
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*/
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/*Do the update on xml_documents
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 */
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UPDATE systemMetadata sm
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SET archived = false
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FROM xml_documents x,
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	identifier id
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WHERE x.docid = id.docid
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AND x.rev = id.rev
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AND id.guid = sm.guid
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AND sm.obsoleted_by IS NOT null
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AND sm.archived = 'true';
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/* Register schemas
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*/
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DELETE FROM xml_catalog 
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      WHERE entry_type LIKE 'Schema'
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        AND system_id LIKE '%/dataone/%';
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DELETE FROM xml_catalog 
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      WHERE entry_type LIKE 'Schema'
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        AND system_id LIKE '%/dc/%';
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DELETE FROM xml_catalog 
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      WHERE entry_type LIKE 'Schema'
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        AND system_id LIKE '%/dwc/%';
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DELETE FROM xml_catalog 
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      WHERE entry_type LIKE 'Schema'
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        AND system_id LIKE '%/dryad/%';                
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INSERT INTO xml_catalog (entry_type, public_id, system_id)
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  VALUES ('Schema', 'http://ns.dataone.org/service/types/v1', '/schema/dataone/dataoneTypes.xsd');
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INSERT INTO xml_catalog (entry_type, public_id, system_id)
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  VALUES ('Schema', 'http://ns.dataone.org/service/types/v1.1', '/schema/dataone/dataoneTypes_v1.1.xsd');
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INSERT INTO xml_catalog (entry_type, public_id, system_id)
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  VALUES ('Schema', 'http://purl.org/dryad/schema/terms/v3.1', '/schema/dryad/dryad.xsd');
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INSERT INTO xml_catalog (entry_type, public_id, system_id)
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  VALUES ('Schema', 'http://purl.org/dryad/schema/dryad-bibo/v3.1', '/schema/dryad/dryad-bibo.xsd');
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INSERT INTO xml_catalog (entry_type, public_id, system_id)
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  VALUES ('Schema', 'http://purl.org/dc/terms/', '/schema/dc/dcterms.xsd');
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INSERT INTO xml_catalog (entry_type, public_id, system_id)
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  VALUES ('Schema', 'http://purl.org/dc/elements/1.1/', '/schema/dc/dc.xsd');
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INSERT INTO xml_catalog (entry_type, public_id, system_id)
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  VALUES ('Schema', 'http://purl.org/dc/dcmitype/', '/schema/dc/dcmitype.xsd');
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INSERT INTO xml_catalog (entry_type, public_id, system_id)
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  VALUES ('Schema', 'http://rs.tdwg.org/dwc/terms/', '/schema/dwc/tdwg_dwcterms.xsd');
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/*
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 * update the database version
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 */
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UPDATE db_version SET status=0;
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INSERT INTO db_version (version, status, date_created) 
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  VALUES ('2.4.0', 1, CURRENT_DATE);
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