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Revision 8783

Added by ben leinfelder over 10 years ago

correct glaring erros -- still needs to be honed, but at least it runs without NPE and Jena/foresite errors

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test/edu/ucsb/nceas/metacat/annotation/OrePackageTest.java
34 34 
import org.dataone.service.types.v1.ObjectFormatIdentifier;
35 35 
import org.dataone.service.types.v1.Session;
36 36 
import org.dataone.service.types.v1.SystemMetadata;
37 
import org.dspace.foresite.OREFactory;
37 38 
import org.dspace.foresite.Predicate;
38 39 
import org.dspace.foresite.ResourceMap;
39 40 
import org.dspace.foresite.Triple;
......
72 73 
	 */
73 74 
	public static Test suite() {
74 75 
		TestSuite suite = new TestSuite();
75 
		suite.addTest(new DatapackageSummarizerTest("testGenerateAnnotation"));
76 
		suite.addTest(new OrePackageTest("testGenerateAnnotation"));
76 77 
		return suite;
77 78 
	}
78 79
......
87 88 
		Identifier metadataPid = new Identifier();
88 89 
		metadataPid.setValue("testOre.eml." + System.currentTimeMillis());
89 90 
		Session session = getTestSession();
90 
		try {
91 
			InputStream object = new ByteArrayInputStream(this.getTestDocFromFile(ANNOTATION_TEST_DOC).getBytes("UTF-8"));
92 
			SystemMetadata sysmeta = createSystemMetadata(metadataPid, session.getSubject(), object);
93 
			ObjectFormatIdentifier formatId = new ObjectFormatIdentifier();
94 
			formatId.setValue("eml://ecoinformatics.org/eml-2.0.0");
95 
			sysmeta.setFormatId(formatId);
96 
			Identifier pid = MNodeService.getInstance(request).create(session, metadataPid, object, sysmeta);
97 
			assertEquals(metadataPid.getValue(), pid.getValue());
98 
		} catch (Exception e) {
99 
			e.printStackTrace();
100 
			fail("Could not add metadata test file: " + e.getMessage());
101 
		}
91 
//		try {
92 
//			InputStream object = new ByteArrayInputStream(this.getTestDocFromFile(ANNOTATION_TEST_DOC).getBytes("UTF-8"));
93 
//			SystemMetadata sysmeta = createSystemMetadata(metadataPid, session.getSubject(), object);
94 
//			ObjectFormatIdentifier formatId = new ObjectFormatIdentifier();
95 
//			formatId.setValue("eml://ecoinformatics.org/eml-2.0.0");
96 
//			sysmeta.setFormatId(formatId);
97 
//			Identifier pid = MNodeService.getInstance(request).create(session, metadataPid, object, sysmeta);
98 
//			assertEquals(metadataPid.getValue(), pid.getValue());
99 
//		} catch (Exception e) {
100 
//			e.printStackTrace();
101 
//			fail("Could not add metadata test file: " + e.getMessage());
102 
//		}
102 103 

  		




  103
  104
  
    
		// generate the ORE for the EML metadata + data


  		




  104
  105
  
    
		Map<Identifier, List<Identifier>> resources = new HashMap<Identifier, List<Identifier>>();


  		




  ......




  112
  113
  
    
		ResourceMap resourceMap = ResourceMapFactory.getInstance().createResourceMap(resourceMapPid , resources);


  		




  113
  114
  
    
		


  		




  114
  115
  
    
		// augment the ORE package with triples describing the derivation


  		




  115
  
  
    
		Triple triple = new TripleJena();


  		




  116
  
  
    
		triple.initialise(new URI(dataIdentifier.getValue()));


  		




  117
  116
  
    
		Predicate predicate = new Predicate(new URI("http://www.w3.org/ns/prov#wasDerivedFrom"));


  		




  118
  
  
    
		triple.relate(predicate , new URI("https://cn.dataone.or/cn/v1/resolve/data.1.1"));


  		




  
  117
  
    
		Triple triple = 


  		




  
  118
  
    
				OREFactory.createTriple(


  		




  
  119
  
    
						new URI("https://cn.dataone.org/cn/v1/resolve/" + dataIdentifier.getValue()), 


  		




  
  120
  
    
						predicate, 


  		




  
  121
  
    
						new URI("https://cn.dataone.org/cn/v1/resolve/data.1.1"));


  		




  
  122
  
    
		System.out.println("Triple: " + " " + triple.getPredicate().getURI() + " " + triple.getObjectURI());


  		




  119
  123
  
    
		resourceMap.addTriple(triple);


  		




  120
  124
  
    

  		




  121
  125
  
    
		// get the RDF content


  		












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