Metacat

#!/bin/bash

#It also updates the alternatives for java, javac, keytool and javaws to openjdk-7.

#It also modifies the /etc/tomcat7/catalina.properties to allow DataONE idenifiers.

echo "install openjdk-7-jdk"

sudo apt-get install openjdk-7-jdk

sleep 3

echo "configure java, java, keytool and javaws"

sudo update-alternatives --set java /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/java

sudo update-alternatives --set javac /usr/lib/jvm/java-7-openjdk-amd64/bin/javac

sudo update-alternatives --set keytool /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/keytool

sudo update-alternatives --set javaws /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/javaws

echo "install tomcat7"

sudo apt-get install tomcat7

sudo sed -i.bak '$ a\org.apache.tomcat.util.buf.UDecoder.ALLOW_ENCODED_SLASH=true' /etc/tomcat7/catalina.properties

echo "read the location of the workers.properties file from the jk_conf"

while read f1 f2

do

        if [ "$f1" = "JkWorkersFile" ]; then

		JKWORKERPATH="$f2"

	fi

done < /etc/apache2/mods-enabled/jk.conf

echo "the jk workers.properties location is $JKWORKERPATH"

echo "update the tomcat home and java home in workers.properties file"

sudo sed -i.bak --regexp-extended "s/(workers\.tomcat_home=).*/\1\/usr\/share\/tomcat7/;

                s/(workers\.java_home=).*/\1\/usr\/lib\/jvm\/java-7-openjdk-amd64/;"\

                $JKWORKERPATH