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Bug #4149

Workflow Run Manager - Export Runs feature

Added by Derik Barseghian about 10 years ago. Updated about 10 years ago.

Status:
Resolved
Priority:
Normal
Category:
general
Target version:
Start date:
06/12/2009
Due date:
% Done:

0%

Estimated time:
Bugzilla-Id:
4149

Description

WRM needs to be able to Export Runs from a gui context menu, or without a gui by just accepting a list of run lsids. This will build a kar containing all required items. Proposed KAR format is here:
https://kepler-project.org/developers/teams/framework/proposed-changes-to-kar/?searchterm=kar

but we've decided to punt on a lot of that for the sanparks target. No directory structure or module stuff for now, mainly just wf momls, run momls, romls and rios will go into the kar for now.


Related issues

Blocked by Kepler - Bug #4148: Workflow Run Manager - Upload to Repository featureResolved06/12/2009

Blocks Kepler - Bug #4151: exported RIO and ROML doc run-pairs have same KeplerLSIDResolved06/12/2009

Blocked by Kepler - Bug #4000: WRP - upload PRAs to repositoryResolved04/20/2009

History

#1 Updated by ben leinfelder about 10 years ago

perhaps split this bug into two - one for the very near 2a1 release and another for the full-REAP/2.0 version?

#2 Updated by Derik Barseghian about 10 years ago

Exporting runs where reporting has been used is now broken. I don't know why yet. I get this error:

java.lang.NullPointerException
Failed to create kar file: Error building the KAR file: Cannot create KAR: null
at org.kepler.kar.handlers.ReportLayoutKAREntryHandler.getReportLayoutForWorkflowRun(ReportLayoutKAREntryHandler.java:311)
at org.kepler.kar.handlers.ReportLayoutKAREntryHandler.saveWorkflowRun(ReportLayoutKAREntryHandler.java:172)
at org.kepler.kar.handlers.ReportLayoutKAREntryHandler.save(ReportLayoutKAREntryHandler.java:146)
at org.kepler.kar.KARBuilder.generateKAR(KARBuilder.java:192)
at org.kepler.workflowrunmanager.gui.WorkflowRunManagerPanel.exportRunsToKAR(WorkflowRunManagerPanel.java:598)

#3 Updated by Derik Barseghian about 10 years ago

The problem in comment #2 was fixed some time ago.

#4 Updated by ben leinfelder about 10 years ago

marking as fixed - for sanparks.
As we extend this feature for REAP, we can add a new bug.

#5 Updated by Redmine Admin over 6 years ago

Original Bugzilla ID was 4149

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