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First Community Workshop » History » Revision 22

Revision 21 (Corinna Gries, 01/16/2014 01:52 PM) → Revision 22/29 (Corinna Gries, 01/16/2014 02:15 PM)

h1. First Community Workshop 

 h2. Goals 

 * Develop ideas for larger synthesis across systems 
 * Introduce scientists to the concept of workflow systems 
 * Introduce scientists to open data and methods sharing 
 * Gather requirements for collaboration tools that would allow scientists to use them and share data and workflows. 


 h2. Participants 

 Ilkay Altintas, UC San Diego, altintas at sdsc.edu 
 Carl Boettiger, UC Davis, cboettig at gmail.com 
 Erica Christensen, Utah State, erica.christensen at weecology.org 
 Elsa Cleland, UCSD, ecleland at ucsd.edu 
 Scott Collins, U New Mexico, scollins at sevilleta.unm.edu 
 Sam Fey, Dartmouth, Samuel.B.Fey.GR at dartmouth.edu 
 Corinna Gries, U Wisconsin, cgries at wisc.edu 
 Lauren Hallett, Berkeley, lauren.m.hallett at gmail.com 
 Stan Harpole, Iowa State, harpole at iastate.edu 
 Dave Harris, UC Davis, harry491 at gmail.com 
 Matt Jones, UC Santa Barbara, jones at nceas.ucsb.edu 
 Sydney Jones, U New Mexico, syd at sevilleta.unm.edu 
 Julie Ripplinger, Arizona State University, julie.ripplinger at asu.edu 
 Andrew Rypel, WDNR, andrew.rypel at wisconsin.gov 
 David Seekell, UVa, das9xx at virginia.edu 
 Elizabeth Siddon, U. Alaska Fairbanks, ecsiddon at alaska.edu 
 Eric Sokol, Virginia Tech, sokole at vt.edu 
 Lizzie Wolkovitch, UCSD/Harvard, lizzie at biodiversity.ubc.ca, wolkovich at fas.harvard.edu 



 h2. Agenda 


 |_\3<. Wednesday February 5, 2014| 
 | 8:30 am -    9:00 am | Welcome and introductions | Corinna | 
 | 9:00 am -    9:20 am | Project overview | Corinna, Scott, Matt | 
 | 9:20 am - 10:00 am | Intro to community metrics| Scott| 
 |10:00 am - 10:30 am |_.Coffee Break| | 
 |10:30 am - 11:00 am | Automating community metrics, data and workflow repositories and workflows | Matt | 
 |11:00 am - 12:00 pm | Hands-on Kepler exercise 'making workflows portable' | Matt | 
 |12:00 pm -    1:00 pm |_. Lunch | on your own | 
 | 1:00 pm -    2:00 pm | Round-the-room brainstorm community metrics | Scott plenary | 
 | 2:00 pm -    2:30 pm | Prioritize community metrics | Scott plenary | 
 | 2:30 pm -    3:00 pm | form working groups | plenary | 
 | 3:00 pm -    3:30 pm |_.Afternoon Break | | 
 | 3:30 pm -    5:30 pm | Community metrics implementation hackathons (R) | working groups | 
 |\3=. | 
 |_\3<.Thursday February 6, 2014| 
 | 8:30 am - 10:00 am | Community metrics implementation hackathons (R) | working groups | 
 |10:00 am - 10:30 am |_.Coffee Break| | 
 |10:30 am - 12:00 pm | Community metrics implementation hackathons (Kepler) | working groups | 
 |12:00 pm -    1:00 pm |_. Lunch | on your own | 
 | 1:00 pm -    2:00 pm | Discussion hackathon outcomes | plenary | 
 | 2:00 pm -    3:00 pm | Executing and sharing community metrics workflows | working groups | 
 | 3:00 pm -    3:30 pm |_.Afternoon Break | | 
 | 3:30 pm -    4:30 pm | Desiderata for sharing community metrics | working groups | 
 | 4:30 pm -    5:30 pm | Next steps - requirements for sharing workflows | plenary | 
 |\3=. | 
 |_\3<.Friday February 7, 2014| 
 | 8:30 am - 10:00 am | Next steps - prioritized list of datasets, analyses, data operations, visualizations | plenary | 
 |10:00 am - 10:30 am |_.Coffee Break| | 
 |10:30 am - 12:00 pm | Next steps - research questions to be answered with diverse data and identified community metrics    | plenary | 
 |12:00 pm |_. Adjourn | | 



 h2. Outcome 

 * Repository design requirements for sharing workflows 
 * list of community metrics 
 * list of data sets 
 * list of data transformation operations to get from raw data to analyses 
 * list of visualizations 
 * research collaborations: Ideas for ecological questions that can be answered with these data and metrics