Project

General

Profile

Activity

From 04/13/2014 to 05/12/2014

05/12/2014

11:31 AM Revision 8770 (metacat): do not set archived=false for all CN.create calls. The CN will use create() even harvesting content that is new to it and needs to handle already-archived content. https://projects.ecoinformatics.org/ecoinfo/issues/6475
ben leinfelder

05/09/2014

01:48 PM Revision 8769 (metacat): cache the imported models to avoid timeouts from remote hosts (or being locked out for too many requests in a given time period).
ben leinfelder

05/08/2014

04:25 PM Revision 8768 (metacat): process all the returned annotation suggestions until we find one that is appropriately located in the subclass hierarchy for the given superclass.
ben leinfelder
04:23 PM Revision 8767 (metacat): use in-memory TDB dataset for querying annotations for indexing -- this comes with the same reasoning capabilities as the directory-based one, but has the benefit of not filling the directory with triples that will not be used again. prepping for d1 AHM
ben leinfelder
11:16 PM Revision 8766 (metacat): pass around the object file path rather than the data stream so that multiple subprocessors can index the same object and not consume the stream before it gets to the next one. In preparation for extending the assertions stored in OREs. https://projects.ecoinformatics.org/ecoinfo/issues/6548
ben leinfelder
11:12 PM Revision 8765 (metacat): when indexing annotations directly, just use an in-memory triple store rather than TDB since we remove each graph as it is processed (and my TDB instance would get into the multi-GB range with a few runs, even if I removed the old models)
ben leinfelder

05/06/2014

05:17 PM Revision 8764 (metacat): redirect "short form" metacat read URIs to the the new Metacat UI using the configured UI context. This translates the docid -> pid to use the correct identifier for the correct service. https://projects.ecoinformatics.org/ecoinfo/issues/6546
ben leinfelder

05/02/2014

04:39 PM Revision 8763 (metacat): simplify lookup for classes and orcid. remove the "random" annotation code branches -- just too confusing to look at those bogus classes especially now that we have "real" generated annotations.
ben leinfelder

04/30/2014

03:47 PM Revision 8762 (metacat): add 'test' for indexing annotations without actually storing the RDF of the generated annotation.
ben leinfelder
03:46 PM Revision 8761 (metacat): only allow multiple values for multi-valued fields....
ben leinfelder
01:02 PM Revision 8760 (metacat): Add admin service to update DOI registrations by specifying a list of formatIds or DOIs, or update all.
Lauren Walker
05:21 PM Revision 8759 (metacat): use new method to override the CN URL when constructing a CNode instance. see https://redmine.dataone.org/issues/5142
ben leinfelder

04/29/2014

04:55 PM Revision 8758 (metacat): use newer httpclient library so that Jena's dependency is met - this goes all the way back to d1_common/libclient needing to pull in the newer library.
ben leinfelder
04:54 PM Revision 8757 (metacat): first pass at direct EML->semantic index method. Still produces an RDF model, but does not persist it in Metacat, only in the triplestore. Allows us to re-run without adding stale RDF to the MN store.
ben leinfelder
04:52 PM Revision 8756 (metacat): allow multivalued fields to be indexed using the "fields" pass through.
ben leinfelder
04:47 PM Revision 8755 (metacat): Remove the attribute disable from the update button if it has been submitted.
Jing Tao
03:31 PM Revision 8754 (metacat): The image which has the default values.
Jing Tao
03:13 PM Revision 8753 (metacat): Add a new screen shot which contains the cn url.
Jing Tao

04/28/2014

04:54 PM Revision 8752 (metacat): Localized the file which doesn't have the bean for dataUrl.
Jing Tao
03:38 PM Revision 8751 (metacat): Add the cn url.
Jing Tao
03:37 PM Revision 8750 (metacat): Add the text field for the cn url.
Jing Tao
03:30 PM Revision 8749 (metacat): Store the cn url in the backup.
Jing Tao

04/24/2014

01:28 PM Revision 8748 (metacat): switch to use FIleUpload instead of O'Reilly COS library for handling chunked file uploads. https://projects.ecoinformatics.org/ecoinfo/issues/6517
ben leinfelder
01:26 PM Revision 8747 (metacat): forgot to check in the actual class: first pass at allowing admins to update DOI registration. This only acts on EML objects at the moment and is meant to illustrate one mechanism for updating the DOIs. https://projects.ecoinformatics.org/ecoinfo/issues/6530
ben leinfelder

04/23/2014

12:35 PM Revision 8746 (metacat): first pass at allowing admins to update DOI registration. This only acts on EML objects at the moment and is meant to illustrate one mechanism for updating the DOIs. https://projects.ecoinformatics.org/ecoinfo/issues/6530
ben leinfelder
10:19 AM Revision 8745 (metacat): correct the ORE lookup query syntax and add junit assertion to check that it continues to function as expected. https://projects.ecoinformatics.org/ecoinfo/issues/6529
ben leinfelder

04/22/2014

03:38 PM Revision 8744 (metacat): index the ORE after we submit the metadata for indexing. https://projects.ecoinformatics.org/ecoinfo/issues/6520
ben leinfelder
11:43 AM Revision 8743 (metacat): include BioPortal lookup for Entity matches using the data table description. TODO: only associate measurements to the entity observation if they apply.
ben leinfelder

04/21/2014

11:12 AM Revision 8742 (metacat): recompile with java 1.6 for compatibility with our servers.
ben leinfelder

04/19/2014

05:29 PM Revision 8741 (metacat): Remove the reference to the bean eml.fileID.
Jing Tao

04/18/2014

05:22 PM Revision 8740 (metacat): use 1.5.1 tag for hudson to build metacat ui (for KNB deployment)
ben leinfelder

04/17/2014

02:19 PM Revision 8739 (metacat): Index the document after it has been inserted.
Jing Tao
02:18 PM Revision 8738 (metacat): Index the document after document is written to the db.
Jing Tao

04/16/2014

02:28 PM Revision 8737 (metacat): Use the ecogrid-1.2.3 branch which will be the next release.
Jing Tao

04/15/2014

09:36 AM Revision 8736 (metacat): Remove the bean named eml.fileID which used the ResolveSolrField class.
Jing Tao

04/14/2014

02:58 PM Revision 8735 (metacat): calculate geohash_3 to three places (typo)
ben leinfelder
02:55 PM Revision 8734 (metacat): use NSEW for the bounding box geohash calculation from EML - all versions
ben leinfelder
02:50 PM Revision 8733 (metacat): up the field count to 111 to include the 9 geohash fields.
ben leinfelder
02:07 PM Revision 8732 (metacat): Using 1.3.0-SNAPSHOT from d1_cn_index_processor
Peter Slaughter
01:34 PM Revision 8731 (metacat): Add fields for geohashes
Peter Slaughter
01:33 PM Revision 8730 (metacat): Add beans to support geohashes
Peter Slaughter
01:33 PM Revision 8729 (metacat): Add beans to support geohashes
Peter Slaughter
 

Also available in: Atom