Metacat

remove replication control panel from dev skin -- now in admin interface
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=5528

replication control panel now fully implemented as an admin configuration screen
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=5528

change the footer to be regwhitetext style.

make regtext style black and add new style regwhitetext.

move replication configuration actions to the admin servlet and out of the replication servlet
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=5528

Using the method sending form parameters rather than form object.
The reason is IE will invalidate the form object after putting a login message on the div which contains the form.

Add methods to send form parameters to the server.

include Subject comparator changes

use /cn/xslt/ for the standard cn deployment

new jars with (at least) xslt updates for the D1 CN

Using the method which reloads the page after sending login. This will fix an issue that the search function couldn't get the session id after login.

Add a new method which will reload the page after submitting a form.

updated d1_libclient jar from trunk

updated d1_common jar from trunk

lookup stylesheet from metacat.properties for CN list objects and list formats. This is used in conjunction with the CN rest service deployment where the xslt is actually kept.

DataONE MN registration/configuration is now its own configuration page in the admin interface.
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=5531

New libclient jar with changes to CNode.setReplicationStatus() (r5824).

Adding new D1 jars (r5818) with changes to libclient's CNode.setReplicationStatus(). It now sends multipart params rather than files since there's no XML structure to ReplicationStatus.

upgrade to 1.0.1-SNAPSHOT DataONE jars

check for blank key passwords

started replication unit test

New D1 libraries, fix for MNode.isNodeAuthorized() and other exception handling.

Add new D1 jars with 1.0.0 API additions (MNStorage.systemMetadataChanged()) and libclient fixes.

Add new D1 jars with the new MNStorage.systemMetadataChanged() additions.

Add new d1_common jar with the API changes that add serialVersion parameters to CNAuthorization and CNReplication methods.

use HttpClient to set up SSL connection when doing replication calls -- this will use the server's configured certificate as the client certificate on the request. The server it is calling can then inspect that certificate and decide whether or not it trusts the caller.

newer d1 jar (for good measure)

check client-provided certificate when servicing ReplicationServlet requests.

MetadataTypeRegister is now replaced by ObjectFormatService. Removing it and it's test.

move the DataONE 1.0.0-SNAPSHOT

call the web.xml tomcat6 not tomcat5

remove reference to tomcat5.5 in favor of tomcat6. including the "custom" start up script that used the sun jdk -- this can be configured rather than coded into the script.

Configure and use CertificateManager in order to act as the MN when performing replicate() and getReplica() mthods.

change upgrade scripts/routines to use 2.0.0 version number instead of 1.10.0

include CILogon link and more explanation about what is going on with the mapping.

correctly check that user is logged into metacat before proceeding

use null session for now

draft of legacy-to-d1 account mapping interface

including newer d1 libclient that uses Foresite (and Jena) to construct/parse ORE resource maps for DataONE

update D1 jars to include recent SubjectList -> SubjectInfo refactoring and the SUBJECT_PUBLIC constant

Fix service versioning in metacat.properties so that when Metacat nodes are registered they report the correct service version for use in resolve() -- i.e., use "v1" instead of "0.6.4" in resolve urls.

updated d1_common jar (unknown changes)

use rfc2253 format when extracting certificate subject

for default Metacat installation we turn off multicast and only enable localhost communication.

Fixed the D1 URL to the Coordinating Node that had been missing /cn in the path.

use Settings augmentation to customize the D1Client.CN_URL when used in a Metacat deployment.

Updating CN property to use cn-dev.

Pull the certificate path for dataone certificates from the metacat properties file.

Newest D1 0.6.4 jars

Use multicast in the hazelcast config for local deployments.

comment out the external hazelcast config location for default building

Add in the hzObjectPath map to the hazelcast config file for a local deployment. Enable the MapStore impl for both maps.

A default hazelcast config file for metacat.

Removed extraneous comments.

Add boolean field for synchronization status.

New default properties for dataone MN properties.

A configuration section for DataONE Member Node properties.

newer d1 jars -- contains CN.isNodeAuthorized() method

Set the correct cluster name and password for the D1 Hazelcast process cluster. This will likely change for production deployments.

allow urls with "v1" in them

use shared hazelcast properties location on the CN

further development of ObjectPathMapLoader.

Add properties for strings used to connect to the DataONE storage and process Hazelcast clusters. The storage cluster is defined in the hazelcast.xml config file, and we list the names of the systemMetadataMap and the tasksIdNamespace in order to connect to these structures. When creating CNReplicationTask objects, use the task id generator to get a unique task id.

Add the hazelcast client jar so Metacat can connect to the DataONE storage cluster that initializes the hzNodes shared node map and other structures as needed.

Newest version of the D1 0.6.4 common jar.

Add the dataone.hazelcast.configFilePath property to be used when MetacatServlet becomes a Hazelcast cluster member using HazelcastService. TODO: what are the consequences of restarting the service via doRefresh()? It's set to false for now.

changes for schema update (d1_common)

added HazelCast MapStore and MapLoader implementation for SystemMetadata

remove unused dataone properties

use 0.6.4 for node capabilities

Update DataONE jar files to 0.6.4. Updated classes to follow.

latest D1 jars - changes include:
updateSystemMetadata() impl for CN
new identifier methods (generate is its own method)
removal of the resourceMap pointer from system metadata

Update the d1 common java jar to include the changes to BaseException, and update MNodeService.synchronizationFailed() to use the BaseException.getNodeId() method to report which node the exception came from.

updated jars after recent schema changes (no real change for us here)

use new "v1" types from DataONE

-handle NotFound object format when generating system metadata
-improve EML DML for null entity/attribute elements

Use CamelCaps for properties for better readability.

allow alternative CNode implementations (subclasses) to be returned when D1Client.getCN() is called. The alternative is given in the Settings configuration via the D1Client.cnClassName property.
MockCNode in Metacat is an example of such an alternative and is used when Metacat requires methods of a CN be present for unit testing.

Added node synchronization and replication properties.

Added service availability properties for each of the MN services.

Added service version properties for each of the MN services.

add hasReservation() method (NotImplemented, however)

newer jars with better certificate exception handling as well as additional libclient implementations

newer d1_common jar with updated MNCore interface

add "public" user subject

make the left panle look exactly the same as the left panel of index.jsp.

simplify the MN rest servlet mapping to match CN mappings - also streamlined the handler code to share extra path info parsing

route all /d1/cn/* traffic through the CNRestServlet/Handler -- inspect the pathInfo when deciding what action to take and also strip off any extra parts (like pid).
include query() method pass-through to CNodeService

remove old RestServlet url-mappings

remove old RestServlet and it's mappings -- only using D1Servlet subclasses now

MN rest servlet, handler and mappings

add CNRestServlet and mappings for urls in the form:
/d1/cn/*
This extends existing code for CN-specific handling. MN handling will be analogous and is forthcoming

include commons-configuration jar -- runtime dep for d1_common

Add a dataone.serviceName property (set to 'd1') to remove hardcoded 'd1' strings in the codebase.

Make "Change Access Permission" button work on sanparks scheduler web page.
Merge the change from 1.9.5 branch to the trunk.

newer jars with updated CNRegistry even though we aren't implementing that interface

oops!

use shared getLogRecords method

use Permission, not Event for isAuthorized() methods

include different (non pisco) referral account (merge from 1.9.5 branch)
include upgrade sql scripts