Metacat

added some debug lines

use the detected document encoding when getting the outputstream writer from the response
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2495

use detected XML encoding when reading/writing files
use UTF-8 as default when performing queries in the DB (assume DB is using UTF-8)
remove as many PrintWriters (uses system default character encoding only) as possible and construct OutputStreamWriters where explicit encoding can be given....

fixed bug where permission would get set to -1 for no good reason

add support for EML 2.1.1

fix the setaccess() method so that it accepts strings not numbers (i.e. "read" not "4")

allow public access to log information when docid is given. IP and principal are not returned unless an administrator makes the request.

fixed a couple bugs with dates and fixed a major bug where metacat was reading the entire document from the database everytime a DocumentImpl instance was created even though it didn't need to

added some new error handling to work around this issue https://trac.dataone.org/ticket/706

fixed bug in access control where the sessionid was not correctly passed along so changes of privileges were not being made

fixed bugs associated with crud access control changes.

refactored the sessionService to use a correct singleton initialization scheme. Added true authentication to ResourceHandler.

listObjects is now working for rest calls as well as crud calls

implementing getObjects in CrudService.

listObjects is almost working. need to get the result set parsed when returned to CrudService.

removed CrudService dependency on servlet params. CrudService is now a singleton. I'm getting an error from metacat saying it can't find teh systemmetadata schema, even though it is, in fact, registered with metacat. need to identify why this is happening.

Added note on TODO for access bug.

added a method in IdentifierManager to get a guid from a docid and rev. added fields in the documentinfo replication document to pass the guid. now need to handle the guid and insert it into the table if its found

Modifications to support the DataONE service API version 0.1.0. For DataONE, the get() and
create() services are partially complete. Several more functions and checks need to be added to
create() before it is viable. This DataONE support is not complete, and the current support breaks the MetacatRestClientTest for the time being (this client will eventually be removed).

Merge 1.9.2 changes back into the trunk

Modified readFromMetacat() to pass most exceptions up the call stack, which
allows creation of new entry points for calling reads. Still need to
continue factoring out the HTTPServletResponse that is passed in in order to
make entrypoints that are not servlet based possible. Problem now is in...

Added copyright, license, and class documentation.

Merging in REST interface implementation that was created by Serhan Akin. Main change is
a refactored MetaCatServlet.java class, in which all of the handle* methods were moved
into a separate MetacatHandler.java class. This allows both the standard MetaCatServlet...