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# Date Author Comment
9339 09/28/2015 10:01 AM Jing Tao

Add a note for the updateSystemMetadata method.

9337 09/25/2015 02:55 PM Jing Tao

CN.updateSystemMetadata will ignore the serial version and replica list in the comming system metadata from the mn.

9335 09/24/2015 04:58 PM Jing Tao

Add the code to check the date of system metadata modification match in MN.updateSystemMetadata only. CN.updateSystemMetadata doesn't check.

9333 09/24/2015 01:59 PM ben leinfelder

use request query string first when handling MN.query() method. https://redmine.dataone.org/issues/7384

9329 09/23/2015 03:35 PM Jing Tao

Commented out the code to check serial version on the updateSystemMetadata method.

9328 09/23/2015 12:00 PM Jing Tao

Add more debug messages for the isCNAdmin method.

9327 09/21/2015 04:37 PM Jing Tao

Put a the systemMetadataChanged method into a queue, so it will not hold the block.

9326 09/16/2015 12:57 PM Chris Jones

Change updateReplicationMetadata() and setReplicationStatus() to no longer set the dateSysmetaModified date per our discussion on 9/16/15.

9325 09/16/2015 10:04 AM Jing Tao

Add more debug statement for the updateSystemMetadata method.

9324 09/15/2015 04:16 PM Jing Tao

In the getLog method, if the event is null, we will set it unknown.

9323 09/15/2015 03:51 PM Jing Tao

If the event string is null, we will skip this log in the getLog method.

9322 09/15/2015 03:15 PM Jing Tao

Add the code to check if we can't get the current system metadata from the node in the mn.systemMetadataChanged method.
If we can't find it, an InvalidRequest will be thrown.

9321 09/10/2015 09:47 AM Jing Tao

Fixed a bug that a client can set the original member node to be null.

9320 09/09/2015 02:09 PM Jing Tao

Change some exceptions from the InvalidSystem to the InvalidRequest in the updateSystemMetadata method.

9319 09/09/2015 12:40 PM ben leinfelder

rollback: set session.subject so libclient can look up certificate. Seems like the default behavior may have changed?

9318 09/09/2015 12:01 PM ben leinfelder

set session.subject so libclient can look up certificate. Seems like the default behavior may have changed?

9317 09/08/2015 03:22 PM Jing Tao

use the TypeFactory to convert the Log and ObjectFormatList objects from the v2 to v1.

9315 09/04/2015 03:05 PM Jing Tao

In the setReplicaStatus method, if the coming status is the same one of the existing one, the system metadata will not be updated.

9314 09/02/2015 11:22 AM Jing Tao

Fixed some incorrect exceptions in the getReplica method.

9309 08/28/2015 09:30 AM Jing Tao

In the isAdminAuthorized method, the faiure of the isNodeAdmin method will not interrupt the next check - if it is a cn.

9308 08/26/2015 04:18 PM Jing Tao

Fixed a bug that when the count is 0, the total is incorrect in the querySystemMetadata method.

9307 08/25/2015 04:44 PM Jing Tao

Fixed a bug the total was not correct in the querySystemMetadata method.

9305 08/25/2015 03:25 PM Jing Tao

Use the application/bagit-097 to replace application/bagit.

9304 08/25/2015 02:50 PM Jing Tao

Use the TypeFactory to replace the TypeMarshaller according to the change in the d1_common_java.

9301 08/19/2015 11:41 AM Jing Tao

Use the key word "packages" to replace the "package".

9300 08/17/2015 04:52 PM Jing Tao

Decode the string of the uri after we break the uri into parts base on the "/".

9299 08/17/2015 04:25 PM Jing Tao

Decode the string of the uri after we break the uri into parts base on the "/".

9298 08/17/2015 03:40 PM Jing Tao

Decode the string of the uri after we break the uri into parts base on the "/".

9297 08/17/2015 02:52 PM Jing Tao

Decode the string of the uri after we break the uri into parts base on the "/".

9295 08/14/2015 04:06 PM Jing Tao

Use the D1NodeVersionChecker to determine the mn's version rather than using ping.

9294 08/14/2015 04:04 PM Jing Tao

When the cn.notifyReplicaNodes method, if the target MN source code is a v2 mn, we will use v2 api; if it is a v1 node, we will use v1 api.

9291 08/12/2015 04:27 PM Jing Tao

A new class is used to get the version of service for a given node.

9290 08/10/2015 04:57 PM Jing Tao

Only support the application/bagit format in the getPackage method.

9288 08/07/2015 08:02 AM Jing Tao

Use the status of mn.ping to guess the version of the source node in the replicate method.

9287 08/06/2015 05:23 PM Jing Tao

In the replicate method, it will use the v1.getReplica method if the source node only supports v1 replication service.

9284 08/06/2015 02:34 PM Jing Tao

The code was added to compare the serial version in the updateSystemMetadata method. If the serial version in the new system metadata is less than or equals previous version, an exception will be thrown.

9283 08/06/2015 01:57 PM Jing Tao

Increase the version number after updating the existing object's system metadata in the update method.

9280 08/05/2015 04:37 PM Jing Tao

Fixed a possible null exception in the updateSystemmetadata method.

9277 08/05/2015 04:19 PM Jing Tao

In the MN.updateSystemMetadata method, when we set the obsoletedBy and obsoletes method, we will check if those values already exist in other chains.

9275 08/04/2015 03:53 PM Jing Tao

Add the identifier in the message of the exception when a client tries to reset the obsoletes or obsoletedBy fields.

9274 08/04/2015 02:58 PM Jing Tao

Check the obosoletedBy and Obsoletes only can be set once.

9272 07/30/2015 05:32 PM Jing Tao

The method of setReplicationstatus can be called by CNs and MNs.

9271 07/30/2015 11:08 AM ben leinfelder

merge from V2 impl: check for optional "failure" param instead of throwing exception when it is missing (often is). https://redmine.dataone.org/issues/7283

9270 07/29/2015 02:53 PM ben leinfelder

For sample Apache config, disable SSLv2 and SSLv3 in favor of TLS. https://projects.ecoinformatics.org/ecoinfo/issues/6827

9269 07/29/2015 02:42 PM ben leinfelder

check for optional "failure" param instead of throwing exception when it is missing (often is). https://redmine.dataone.org/issues/7283

9268 07/29/2015 02:13 PM Jing Tao

Fixed a possible null pointer exception bug. https://redmine.dataone.org/issues/7280

9265 07/27/2015 05:15 PM Jing Tao

Only CNs can call those methods:
CNCore.registerSystemMetadata()
CNCore,updateSystemMetadata()
CNReplication.setReplicationStatus()
CNReplication.updateReplicationMetadata()
CNReplication.deleteReplicationMetadata()

9263 07/27/2015 04:20 PM Jing Tao

On mn.update and mn.updateSystemMetadata, those clients are allowed:
1. CNs.
2. Clients with appropriate permission calling the method on the authoritative nodes.

9258 07/21/2015 04:22 PM Jing Tao

When compare the dateUploaded, now we use sysmetadata.getDateUploaded().getTime(). It used systemmetadata.getDateUploaded() (Date objects) to compare.

9257 07/21/2015 01:32 PM Jing Tao

Add code to catch the BaseException in the updateSystemMetadata method.

9256 07/20/2015 03:21 PM Jing Tao

Add the code to handle if the cn is null.

9253 07/16/2015 02:51 PM Jing Tao

Handle multiple versions (v1 and v2) of a service in getCapacity method.

9249 07/15/2015 11:07 AM Jing Tao

Use the NodeReference object to replace the replicaStatus to restrict the listObjects method.

9248 07/15/2015 10:44 AM ben leinfelder

[re]register DOI when system metadata is updated (typically access policy). https://projects.ecoinformatics.org/ecoinfo/issues/6796

9247 07/14/2015 04:56 PM Jing Tao

Change the signature of listObject method - remove replicaStatus and add nodeId.

9246 07/14/2015 04:42 PM Jing Tao

Add the code to call cn.synchroinize at the method of updateSystemMetadata.

9245 07/13/2015 04:35 PM Jing Tao

Throw an exception if the request doesn't specify the name of the theme in the view method.

9244 07/13/2015 03:28 PM ben leinfelder

use objectFormat.extension in cases where we need to construct a filename for download. https://redmine.dataone.org/issues/3312

9243 07/10/2015 02:23 PM Jing Tao

Add the code to insert entries in xml_catalog for the iso119139 objects.

9242 07/10/2015 02:21 PM Jing Tao

Add the code to insert entries in xml_catalog for the iso119139 objects.

9240 07/09/2015 04:38 PM Jing Tao

Add the sql command to insert schemas for iso119139.

9239 07/09/2015 04:37 PM Jing Tao

Add the sql command to insert schemas for iso119139.

9237 07/09/2015 02:09 PM ben leinfelder

use v1 and v2 xsl as appropriate for rendering d1 types (object format list, mostly)

9235 07/08/2015 05:03 PM ben leinfelder

use MediaType from v2.SystemMetadata and v2.ObjectFormat to better determine mime-type, charset and filename for the get() method. https://redmine.dataone.org/issues/3309

9234 07/08/2015 05:01 PM ben leinfelder

correct logout method (old change still in workspace)

9231 07/08/2015 11:53 AM Jing Tao

Fixed a bug that two columns were missing in the sql command.

9230 07/07/2015 04:35 PM Jing Tao

Add the code to read/write the new system metadata fields - file name, media type and media type properties into the db tables.

9229 07/06/2015 04:22 PM Jing Tao

Add code to update smmediatypeproperties table.

9228 06/23/2015 08:48 AM ben leinfelder

add logout implementation - calls server and clears cookie jar.

9227 06/01/2015 02:25 PM Jing Tao

Add the code to create smMediaTypeProperties table.

9226 05/29/2015 10:01 PM Jing Tao

Add the code to create a new table smMediaTypeProperties.

9225 05/29/2015 10:00 PM Jing Tao

Change the name of the foreign key on the smMediaTypeProperties.

9224 05/29/2015 09:49 PM Jing Tao

Add a new table smMediaTypeProperties to store the properties associated with a media type.

9220 05/28/2015 03:11 PM Jing Tao

Throw an exception if the saving system metadata fails.

9219 05/28/2015 01:19 PM Jing Tao

Add the code to roll back the saved system metadata if the object can't be saved.

9218 05/20/2015 02:49 PM Jing Tao

Add the media_type and file_name columns.

9217 05/20/2015 02:49 PM Jing Tao

Add the media_type and file_name columns.

9216 05/20/2015 02:48 PM Jing Tao

Add two columns media_type and file_name.

9215 05/20/2015 02:47 PM Jing Tao

Add the media_type and file_name columns.

9212 05/13/2015 04:25 PM Jing Tao

Add the code to add dataone schema v2 in the xml_catalog table.

9211 05/13/2015 04:24 PM Jing Tao

Add the code to add dataone schema v2 in the xml_catalog table.
Fixed the bug the new column should be series_id rather than guid.

9210 05/13/2015 04:23 PM Jing Tao

Add the code to add dataone schema v2 in the xml_catalog table.

9209 05/13/2015 04:22 PM Jing Tao

Add the code to add dataone schema v2 in the xml_catalog table.

9206 05/11/2015 10:43 PM Jing Tao

Don't use ssClient as a class field. Now it is a local variable. This fixed an issue that two statements using the client caused the exception - java.net.SocketTimeoutException: Read timed out.

9204 05/11/2015 02:09 PM rnahf

refs: #7092. found another unclosed inputStream, this time in ReplicationService.handleForceReplicationDataFileRequest(...).

9203 05/11/2015 12:28 PM rnahf

fixes #7092: added finally clause to ReplicationHandler.update method to unconditionally close the inputStreams it keeps in a Vector. Needs testing.

9202 05/08/2015 11:11 AM Jing Tao

Use the wild card in the class path. So it will not be pain if the jar files were changed.

9200 05/07/2015 06:13 PM Jing Tao

Add the code to check if the client is trying to update an archived object. If it is, reject it.

9192 05/01/2015 04:56 PM Jing Tao

Add a new method -updateSystemMetadata. It only can be called by CNs.

9190 05/01/2015 04:25 PM Jing Tao

Refactory the authorize methods on D1NodeService.
Add the check for whom can call mn.updatesystemMetadata.

9189 05/01/2015 02:59 PM Jing Tao

Committed the change which Andreit did.
1. Add the code for synchronize(not implemented)
2. Add the code for addForm.

9183 04/30/2015 01:28 PM ben leinfelder

remove portal servlet and configuration - no need for this if we are supporting auth tokens from authentication service.

9182 04/30/2015 01:22 PM ben leinfelder

defer to D1 PortalCertificateManager to pull authentication credentials from the request before defering to old Metacat cookie session

9178 04/29/2015 04:41 PM Jing Tao

Add the code to check the authorization of the client which is reindexing a pid.

9177 04/22/2015 05:01 PM Jing Tao

Created the updateSystemMetadata method.

9176 04/22/2015 03:52 PM Jing Tao

Add the code to check if the current node is the authoritative node for the the given pid.

9175 04/21/2015 02:35 PM Jing Tao

Add the check of permission to update the system metadata.

9173 04/14/2015 04:40 PM ben leinfelder

add whoami endpoint to make debugging authn/authz easier as we use additional mechanisms for proving identity.

9172 04/14/2015 02:46 PM ben leinfelder

include 2.4.3 upgrade scripts in the trunk (merged from branch)

9170 04/14/2015 02:43 PM Jing Tao

Remove the code to check sid on create and registerSystemMetadata.