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# Date Author Comment
5200 01/25/2010 03:02 PM daigle

Send appropriate message when trying to update a docid that was previously deleted.

5199 01/22/2010 10:06 AM daigle

Reformat file. No code change.

5198 01/21/2010 03:02 PM daigle

do a quick retry if building path index fails with a SQL error

5197 01/20/2010 02:55 PM daigle

Make sure buildIndex throws an exception if it has a sqlexception. That way the indexing object will be added to the indexing queue and reprocessed.

5196 01/19/2010 04:23 PM daigle

PDF version of doc

5195 01/19/2010 10:25 AM daigle

Pass the doc xml as a string to docImpl.write and writeRepication. This is so a reader can be create for the parsing and for the write to disk. Also created a db access class for xml query result deletion.

5194 01/13/2010 11:16 AM daigle

Update java version references to java 6

5193 01/13/2010 10:56 AM daigle

Remove redundant Version information

5192 01/13/2010 10:55 AM daigle

Add 1.9.2 release notes.

5191 01/12/2010 01:30 PM Matt Jones

Fixed typo in docs.

5190 01/12/2010 01:02 PM Matt Jones

Updated index page to hide obsolete documentation and provide a simpler
description of Metacati, as well as links to where Metacat is in use.

5189 01/11/2010 08:54 AM daigle

Add comments

5188 01/11/2010 08:54 AM daigle

make constants final

5187 01/07/2010 01:37 PM daigle

change dropdown select event to work on IE.

5186 01/06/2010 04:18 PM Jing Tao

Fix the bug of http://bugzilla.ecoinformatics.org/show_bug.cgi?id=4645. handleGetRevisionAndDocTypeAction will search both xml_documents and xml_revisions table.
It also changed some constrain in AccessionNumber when user update a document, of which all previous versions are in xml_revisions table.

5185 01/06/2010 02:05 PM daigle

Fix main cross browser gui compatibility issues in sanparks tpc skin.

5184 01/06/2010 02:05 PM daigle

Fix main cross browser gui compatibility issues in sanparks tpc skin.

5183 01/06/2010 02:03 PM daigle

Remove commas from the end of lists because they break IE

5182 01/06/2010 11:41 AM ben leinfelder

remove the "optional" tip since it is not currently optional

5181 01/06/2010 11:39 AM ben leinfelder

add required authentication exception class so that the scheduler can compile

5180 01/06/2010 11:38 AM ben leinfelder

add properties expected by the DB property service

5179 01/06/2010 11:37 AM ben leinfelder

use workflowscheduler DB

5178 01/05/2010 04:07 PM ben leinfelder

use @class attribute for path queries rather than @name

5177 01/05/2010 02:08 PM daigle

Add a sleep statement between getting the dtd from source and checking for it via url. Add method names to log output.

5176 01/04/2010 10:39 AM daigle

Get all eml code from svn instead of cvs

5175 01/04/2010 09:01 AM daigle

Log doc and rev query counts and times. Fix mis-spellings.

5174 01/04/2010 09:00 AM daigle

Log doc and rev query counts and times. Fix mis-spellings.

5173 12/30/2009 09:24 AM daigle

remove extra open paren

5172 12/30/2009 09:22 AM daigle

remove call to print busy db connections

5171 12/30/2009 09:21 AM daigle

add xml_revisions docid index

5170 12/30/2009 09:20 AM daigle

Add debug to show sql

5169 12/21/2009 12:10 PM Duane Costa

Fix for Bug #4637 - Metacat Harvester fails to catch some insert and update failures. As per comments in the bug entry, the Metacat Harvester logic has been modified to examine the Metacat client return string to confirm that it contains the substring "<success>" following an insert or update operation. It no longer considers just the absence of an exception as indicative of a successful operation.

5168 12/18/2009 01:39 PM daigle

log connection warnings only when thresholds are exceeded. Add method names to log output

5167 12/18/2009 01:37 PM daigle

add method name to log statements

5166 12/18/2009 01:36 PM daigle

fix spelling of word additional

5165 12/18/2009 01:26 PM daigle

add method name to log messages and create configured thresholds for warning messages

5164 12/18/2009 01:22 PM daigle

add parc-moderators to config.username

5163 12/10/2009 12:59 PM Chris Jones

I've added the PARC and PISCO organizations to the delete and confirm form templates for the data registry application.

5162 12/09/2009 11:54 AM daigle

Change log levels where appropriate and add class/method name to output.

5161 12/09/2009 11:01 AM daigle

Change warn messages to info

5160 12/08/2009 11:40 AM daigle

beef up error log messages

5159 12/08/2009 11:39 AM daigle

Make sure session data exists before extracting information

5158 12/08/2009 11:39 AM daigle

Separate code to do tls and non-tls authentication. Introduce AuthTLSException to make error handling easier.

5157 12/08/2009 10:20 AM daigle

Beefed up the logging

5155 12/08/2009 09:23 AM daigle

remove registry.config.username value

5154 12/07/2009 04:03 PM daigle

Start to flesh out the eclipse metacat setup document

5153 12/07/2009 04:01 PM daigle

Create some basic workflow scheduler system installation documents

5152 12/03/2009 03:12 PM daigle

When comparing lat and long ranges, make sure the values have content first. Perl values with no content = 0.

5151 12/02/2009 04:00 PM daigle

Change add sql to use a prepared statement. Only try to download a cert if a url was provided.

5150 12/02/2009 03:59 PM daigle

change unregister error message to be an info message

5149 12/02/2009 12:45 PM walbridge

fix file name reference for skin configuration file

5148 12/02/2009 10:40 AM daigle

added a commented out line for auth.moderators for the parc system. This will get uncommented on the parc system and the existing auth.moderators will be commented out.

5147 12/02/2009 07:22 AM Chris Jones

I've removed the value for the PARC registry.config.site property since it isn't appropriate to this skin, and causes the registry CGI to produce two organization creator elements with the same value.

5146 12/01/2009 10:15 AM daigle

hard code parc home url

5145 12/01/2009 10:03 AM daigle

Redirect data.palmyraresearch.org to parc skin

5144 11/30/2009 11:08 AM Chris Jones

I've added the PARC organization to the login form template.

5143 11/30/2009 11:02 AM Chris Jones

I've replaced hard-coded URL strings in the PARC skin files with their appropriate variables in JSP, TT2, and XSL.

5142 11/30/2009 09:58 AM Chris Jones

This updates the Registry login form to handle PARC logins. I've changed the template to load the PARC header and footer if the cfg = parc.

5141 11/25/2009 10:40 AM daigle

added parc to list of available skins.

5139 11/24/2009 12:28 PM daigle

Fix errors in workflow scheduler unit test

5138 11/24/2009 12:26 PM daigle

Create database scripts for workflow scheduler

5137 11/24/2009 12:25 PM daigle

Do not register the session service

5136 11/23/2009 10:05 AM Chris Jones

I'm adding two PARC-specific templates to the CGI templates directory. This is a temporary addition, since these templates should reside in the PARC skin. However, the NCEAS skin has templates in this location as well, and all four files will be relocated once bug #4573 has been resolved where the register and ldapweb CGIs change.

5135 11/23/2009 09:49 AM Chris Jones

I'm adding the spatial support files for the PARC skin. At the moment, the spatial option in the skin is not being used, but these files have been modified slightly from the NCEAS skin version in branding only.

5134 11/23/2009 09:47 AM Chris Jones

I've added in the XSL stylesheets for the PARC skin. The parc, parc-eml, parc-common and login stylesheets have been changed slightly for PARC branding.

5133 11/23/2009 09:44 AM Chris Jones

I'm adding the settings and map JSPs. These are placeholder files since the map is not used in the PARC skin, and the settings file merely import common settings for the skin, but doesn't modify any of the interface settings.

5132 11/23/2009 09:41 AM Chris Jones

These are the minimal images used in the PARC skin layout. The research banner comes from the research section of the PARC website.

5131 11/23/2009 09:39 AM Chris Jones

I've added the PARC CSS file, which uses colors and images found at the PARC website.

5130 11/23/2009 09:37 AM Chris Jones

These are the index files for the PARC skin. The html file provides the standard redirect to the JSP. The JSP has been PARC branded, and the layout has changed slightly to work with the http://www.palmyraresearch.org website layout (e.g. some navigation links have been removed).

5129 11/23/2009 09:34 AM Chris Jones

Here are the three javascript libraries associated with the PARC skin. The only real changes are in the search.js file, where metacat searches have absolute XPaths in the search criteria. The return fields remain as relative XPaths to be consistent with the rendering code for the skin.

5128 11/23/2009 09:32 AM Chris Jones

I'm adding the parc.cfg configuration file, which is effectively a copy of the nceas.cfg file.

5126 11/23/2009 09:29 AM Chris Jones

This is the PARC XML configuration file. I've removed the EML beta 4-6 doctype identifiers since this skin will only deal with EML 2.1.0 documents.

5125 11/23/2009 09:26 AM Chris Jones

I'm adding the Metacat metadata properties file for the PARC installation.

5124 11/23/2009 09:25 AM Chris Jones

I'm adding the properties file configured for the Palmyra Atoll Research Consortium's installation.

5123 11/23/2009 09:15 AM Chris Jones

I'm adding in the parc directory, which will contain the skin for the Palmyra Atoll Research Consortium.

5122 11/19/2009 08:19 AM ben leinfelder

special handling for RDF namespace documents (semtools project)

5121 11/13/2009 04:03 PM daigle

Start to fix I.E. gui issues

5120 11/10/2009 03:13 PM daigle

add connection serial number where it was missing.

5119 11/10/2009 01:31 PM ben leinfelder

check for IE6 and show warning if they are using it

5118 11/09/2009 02:43 PM daigle

Remove seconds and minutes values from workflow scheduler and add weeks and months.

5117 11/09/2009 02:42 PM daigle

Include kar id in delete url parameters so resultset will render after delete

5116 11/09/2009 10:37 AM daigle

Add ability to schedule daily, weekly and monthly jobs.

5115 11/09/2009 10:07 AM daigle

Format and add comments.

5114 11/09/2009 08:51 AM daigle

Beef up comments

5113 11/06/2009 02:48 PM daigle

add method to read test file from disk

5112 11/06/2009 02:47 PM daigle

add getaccesscontrol and setaccess api calls

5111 11/06/2009 02:47 PM daigle

Add access api test and supporting files

5110 11/06/2009 02:46 PM daigle

handle ben's change to the metacat client read api because it returns inputstream now

5109 11/06/2009 02:44 PM daigle

Handle the case of trying to insert a conflicting permission order for a document

5108 11/06/2009 02:43 PM daigle

move dbconnection object out of base class and create it for each db access so it can be released

5107 11/06/2009 02:41 PM daigle

Add success message to metacat response for setaccess action

5106 11/06/2009 01:05 PM ben leinfelder

add id attributes for form elements (in case IE6 needed them) but it appears they are not required

5105 11/05/2009 11:34 AM ben leinfelder

add the "value" attribute for metadata tag downloads

5104 11/05/2009 10:32 AM ben leinfelder

handle multiple <principal> elements in the allow/deny blocks

5103 11/04/2009 03:05 PM daigle

Verify we are in the permission and principal sections before setting values on dao object.

5102 11/03/2009 06:26 PM ben leinfelder

add code block (commented out) to use in case "?column?" headers become an issue.

5101 11/03/2009 03:44 PM ben leinfelder

handle repeating "?column?" headers - somewhat naively, but consistent

5100 11/03/2009 11:52 AM daigle

Use OR to add permissions, not AND

5099 11/03/2009 10:31 AM daigle

Change access section in getaccesscontrol and getdocumentinfo apis to be more eml 2.1.0 compliant. Add a block access option to setaccess api.

5098 10/30/2009 03:39 PM daigle

change AccessControlForSingleFile to only be instantiated for one file. move ACL methods to AccessControlForSingleFile. Change format of access sections returned to EML 2.1.0.