Metacat

CREATE TABLE systemMetadata (

	guid   text,          -- the globally unique string identifier of the object that the system metadata describes

	date_uploaded TIMESTAMP, -- the date/time the document was first submitted

	rights_holder VARCHAR(250), --the user who has rights to the document, usually the first persons to upload it

	checksum VARCHAR(512), --the checksum of the doc using the given algorithm (see below)

	checksum_algorithm VARCHAR(250), --the algorithm used to calculate the checksum

	origin_member_node VARCHAR(250), --the member node where the document was first uploaded

	authoritive_member_node VARCHAR(250), --the member node that currently controls the document

	date_modified TIMESTAMP, -- the last date/time that the file was changed

	submitter VARCHAR(256), -- the user who originally submitted the doc

	object_format VARCHAR(256), --the format of the object

	size VARCHAR(256), --the size of the object

	replication_allowed boolean,	 -- replication allowed

	number_replicas INT8, 	-- the number of replicas allowed

	obsoletes   text,       -- the identifier that this record obsoletes

	obsoleted_by   text,     -- the identifier of the record that replaces this record

	CONSTRAINT systemMetadata_pk PRIMARY KEY (guid)

);

CREATE TABLE systemMetadataReplicationPolicy (

	guid text,	-- the globally unique string identifier of the object that the system metadata describes

	member_node VARCHAR(250),	 -- replication member node

	policy text,	 -- the policy (preferred, blocked, etc...TBD)

	CONSTRAINT systemMetadataReplicationPolicy_fk 

		FOREIGN KEY (guid) REFERENCES systemMetadata

);

CREATE TABLE systemMetadataReplicationStatus (

	guid text,	-- the globally unique string identifier of the object that the system metadata describes

	member_node VARCHAR(250),	 -- replication member node

	status VARCHAR(250),	 -- replication status

	date_verified TIMESTAMP, 	-- the date replication was verified   

	CONSTRAINT systemMetadataReplicationStatus_fk 

		FOREIGN KEY (guid) REFERENCES systemMetadata

);

CREATE TABLE identifier (

   guid   text,          -- the globally unique string identifier

   docid  VARCHAR(250),  -- the local document id #

   rev    INT8,          -- the revision part of the local identifier

   CONSTRAINT identifier_pk PRIMARY KEY (guid)

);

/*

 * add the nodedatadate column to the tables that need it 

 */

ALTER TABLE xml_nodes ADD COLUMN nodedatadate TIMESTAMP;

ALTER TABLE xml_nodes_revisions ADD COLUMN nodedatadate TIMESTAMP;

ALTER TABLE xml_path_index ADD COLUMN nodedatadate TIMESTAMP;

CREATE INDEX xml_path_index_idx5 ON xml_path_index (nodedatadate);

/*

 * Replication changes to support DataONE System Metadata replication

 */

ALTER TABLE xml_replication ADD COLUMN systemmetadatareplicate INT8;

/*

 *  Allow guid in xml_access table (for system metadata)

*/

ALTER TABLE xml_access ADD COLUMN guid text;

/**

 * track the user-agent for the request

 */

ALTER TABLE acces_log ADD COLUMN user_agent VARCHAR(512);

/*

 * Register the DataONE schemas

 */

INSERT INTO xml_catalog (entry_type, public_id, system_id)

  VALUES ('Schema', 'http://ns.dataone.org/service/types/0.6.4', '/schema/D1_SCHEMA_0_6_4/dataoneTypes.xsd');

INSERT INTO xml_catalog (entry_type, public_id, system_id)

  VALUES ('Schema', '@eml2_1_1namespace@', '/schema/eml-2.1.1/eml.xsd');  

/*

 * update the database version

 */

UPDATE db_version SET status=0;

INSERT INTO db_version (version, status, date_created) 

  VALUES ('1.10.0', 1, CURRENT_DATE);

CREATE TABLE systemMetadata (

   guid   VARCHAR2(2000),    -- the globally unique string identifier

   date_uploaded DATE, -- the date/time the document was first submitted

   rights_holder VARCHAR2(250), --the user who has rights to the document, usually the first persons to upload it

   checksum VARCHAR2(512), --the checksum of the doc using the given algorithm (see below)

   checksum_algorithm VARCHAR2(250), --the algorithm used to calculate the checksum

   origin_member_node VARCHAR2(250), --the member node where the document was first uploaded

   authoritive_member_node VARCHAR2(250), --the member node that currently controls the document

   date_modified DATE, -- the last date/time that the file was changed

   submitter VARCHAR2(256), -- the user who originally submitted the doc

   object_format VARCHAR2(256), --the format of the object

   size VARCHAR2(256), --the size of the object

   replication_allowed boolean,	 -- replication allowed

   number_replicas NUMBER(8), 	-- the number of replicas allowed

   obsoletes   VARCHAR2(2000),    -- the identifier of the record that this replaces

   obsoleted_by   VARCHAR2(2000),    -- the identifier of the record that replaces this record

   CONSTRAINT systemMetadata_pk 

		PRIMARY KEY (guid)

)

CREATE TABLE systemMetadataReplicationPolicy (

	guid VARCHAR2(2000),	-- the globally unique string identifier of the object that the system metadata describes

	member_node VARCHAR(250),	 -- replication member node

	policy VARCHAR2(2000),	 -- the policy (preferred, blocked, etc...TBD)

	CONSTRAINT systemMetadataReplicationPolicy_fk 

		FOREIGN KEY (guid) REFERENCES systemMetadata

);

CREATE TABLE systemMetadataReplicationStatus (

	guid VARCHAR2(2000),	-- the globally unique string identifier of the object that the system metadata describes

	member_node VARCHAR(250),	 -- replication member node

	status VARCHAR(250),	 -- replication status

	date_verified DATE, 	-- the date replication was verified   

	CONSTRAINT systemMetadataReplicationStatus_fk 

		FOREIGN KEY (guid) REFERENCES systemMetadata

);

CREATE TABLE identifier (

   guid   VARCHAR2(2000), -- the globally unique string identifier

   docid  VARCHAR2(250),  -- the local document id #

   rev    NUMBER(8)       -- the revision part of the local identifier

);

/*

 * Replication changes to support DataONE System Metadata replication

 */

ALTER TABLE xml_replication ADD COLUMN systemmetadatareplicate NUMBER(1);

/*

 *  Allow guid in xml_access table (for system metadata)

*/

ALTER TABLE xml_access ADD COLUMN guid VARCHAR2(2000);

/**

 * track the user-agent for the request

 */

ALTER TABLE acces_log ADD COLUMN user_agent VARCHAR2(512);

/*

 * add the nodedatadate column to xml_nodes 

 * TODO: load the data into it (java?)

 */

ALTER TABLE xml_nodes ADD COLUMN nodedatadate TIMESTAMP;

ALTER TABLE xml_nodes_revisions ADD COLUMN nodedatadate TIMESTAMP;

ALTER TABLE xml_path_index ADD COLUMN nodedatadate TIMESTAMP;

CREATE INDEX xml_path_index_idx4 ON xml_path_index (nodedatadate);

/*

 * Register the DataONE schemas

 */

INSERT INTO xml_catalog (entry_type, public_id, system_id)

  VALUES ('Schema', 'http://ns.dataone.org/service/types/0.6.4', '/schema/D1_SCHEMA_0_6_4/dataoneTypes.xsd');

INSERT INTO xml_catalog (entry_type, public_id, system_id)

  VALUES ('Schema', '@eml2_1_1namespace@', '/schema/eml-2.1.1/eml.xsd');

/*

 * update the database version

 */

UPDATE db_version SET status=0;

INSERT INTO db_version (version, status, date_created) 

  VALUES ('1.10.0', 1, CURRENT_DATE);

package edu.ucsb.nceas.metacat.admin.upgrade;

/**

 *  '$RCSfile$'

 *    Purpose: A Class for upgrading the database to version 1.5

 *  Copyright: 2000 Regents of the University of California and the

 *             National Center for Ecological Analysis and Synthesis

 *    Authors: Saurabh Garg

 *

 *   '$Author$'

 *     '$Date$'

 * '$Revision$'

 *

 * This program is free software; you can redistribute it and/or modify

 * it under the terms of the GNU General Public License as published by

 * the Free Software Foundation; either version 2 of the License, or

 * (at your option) any later version.

 *

 * This program is distributed in the hope that it will be useful,

 * but WITHOUT ANY WARRANTY; without even the implied warranty of

 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the

 * GNU General Public License for more details.

 *

 * You should have received a copy of the GNU General Public License

 * along with this program; if not, write to the Free Software

 * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA

 */

import edu.ucsb.nceas.metacat.admin.AdminException;

import edu.ucsb.nceas.metacat.properties.PropertyService;

import edu.ucsb.nceas.utilities.SortedProperties;

public class Upgrade1_10_0 implements UpgradeUtilityInterface {

    public boolean upgrade() throws AdminException {

        boolean success = true;

        // node data datetime

        UpgradeNodeDataDatetime dateTimeUpgrade = new UpgradeNodeDataDatetime();

        success = dateTimeUpgrade.upgrade();

        // dataone system metadata generation

    	return success;

    }

    public static void main(String [] ags){

        try {

        	// set up the properties based on the test/deployed configuration of the workspace

        	SortedProperties testProperties = 

				new SortedProperties("test/test.properties");

			testProperties.load();

			String metacatContextDir = testProperties.getProperty("metacat.contextDir");

			PropertyService.getInstance(metacatContextDir + "/WEB-INF");

			// now run it

            Upgrade1_10_0 upgrader = new Upgrade1_10_0();

	        upgrader.upgrade();

        } catch (Exception ex) {

            System.out.println("Exception:" + ex.getMessage());

            ex.printStackTrace();

        }

    }

}

database.upgradeVersion.1.10.0=upgrade-db-to-1.10.0

database.upgradeUtility.1.10.0=edu.ucsb.nceas.metacat.admin.upgrade.Upgrade1_10_0

  VALUES ('1.10.0',1,CURRENT_DATE);

  VALUES ('1.10.0',1,CURRENT_DATE);

            throw new AdminException("Error upgrading system to 1.10.0: " + e.getMessage());