Metacat

use IOUtils for testing read/write of XML strings. This goes along with the utilities project change to use the same apache commons IO library. Be sure to clean the utilities checkout in order to catch the right utilities svn tag when building!

when comparing D1 Subject objects, use the equals() method not direct string comparison
https://redmine.dataone.org/issues/2050

upgrade to 1.0.1-SNAPSHOT DataONE jars

started replication unit test

MockCNode.getSystemMetadata() no longer throws InvalidRequest.

remove catch blocks for unthrown exceptions

uses prepared statement instead of plain old statement.
deprecated the DBConnection.createStatement() method to discourage direct parameter value use in favor of parameter binding.
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=5527

Add a test for systemMetadataChanged. This should be fleshed out more so that the test uses a CN certificate.

uses prepared statement parameter binding for queries
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=5527

check object format id values since they are not Comparable objects