Metacat

Get ReplicationPolicy correctly generated:
-tweak the regular expression for getting the pref/blocked node list for default replication policy.
-set blocked list (had mistakenly been two calls to set pref list)

actually, let's set the serialVersion during the MN.create() call so that the HZ map and the backing store have the same information immediately. Also, this is how the docs specify it.
http://mule1.dataone.org/ArchitectureDocs-current/design/SystemMetadata.html

if serialVersion is null, use defualt value of 0

handle both listing and getting checksums using the GET endpoint -- depends whether or not a pid is included in the URL
https://redmine.dataone.org/issues/2089

remove ID mapping when a create()/"insert" call fails so that subsequent calls do not return an IdentifierNotUnique error. In this case it was due to invalid XML.
https://redmine.dataone.org/issues/2341

use RC-3 DataONE jars and fix compilation error that arose. https://redmine.dataone.org/issues/2351

overload getAllDocidsByType() method for backward semtools compatibility

do not subset the list for MS generation testing -- at least not as the default in svn!

CNodeService.listChecksumAlgorithms() was returning null rather than the list. Fixed.

ObjectFormatCache.getFormat(String formatStr) has been deprecated, and now only takes a formatId instance to get a format from the cache. It also throws Service Failure and NotImplemented, so here just set the format to application/octet-stream in any case.