Metacat

MN.getPackage() - test with ORE that includes 2 data files and a "metadata" file (still should be using EML for that test). https://projects.ecoinformatics.org/ecoinfo/issues/6026

First pass at MN.getPackage() implementation using Bagit library from LOC. https://projects.ecoinformatics.org/ecoinfo/issues/6026

add method for publishing existing object (usually assumed to be scimeta) with a DOI. https://projects.ecoinformatics.org/ecoinfo/issues/6014

add Metacat servlet action to force the reindexing of one or more or all pids in the system. https://projects.ecoinformatics.org/ecoinfo/issues/5945

add simple test for the IndexEventDAO class -- adding, removing, listing events in the DB table. https://projects.ecoinformatics.org/ecoinfo/issues/5944

correct regex for whitespace in D1 identifier.

Add code to test title for the query result.

Rewrite some methods, so the query result can be processed many times.

Removed the commented out text cases and add a test for archvied document.

Call setting certificate location to be the test one after getting the MN baseurl.
The method to getting MN baseurl somehow calls CN and it set the certificate location to be /var/metacat/certs/METACAT1.pem.