Revision 8760
Added by Lauren Walker over 10 years ago
| src/edu/ucsb/nceas/metacat/admin/upgrade/UpdateDOI.java | ||
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import java.util.Collections; |
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import java.util.List; |
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import java.util.ArrayList; |
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import org.apache.commons.logging.Log; |
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import org.apache.commons.logging.LogFactory; |
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/** |
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* Updates existing DOI registrations for EML versions |
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* @author leinfelder |
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* @author leinfelder, walker
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* |
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*/ |
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public class UpdateDOI implements UpgradeUtilityInterface {
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this.serverLocation = serverLocation; |
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} |
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/** |
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* Update the registration of a list of DOIs |
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* @param identifiers - DOIs to update |
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*/ |
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private void updateDOIRegistration(List<String> identifiers) {
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for (String pid: identifiers) {
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try {
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String docid = DocumentUtil.getDocIdFromAccessionNumber(pid); |
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int rev = DocumentUtil.getRevisionFromAccessionNumber(pid); |
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String guid = IdentifierManager.getInstance().getGUID(docid, rev); |
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//Create an identifier and retrieve the SystemMetadata for this guid |
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Identifier identifier = new Identifier(); |
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identifier.setValue(guid); |
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SystemMetadata sysMeta = HazelcastService.getInstance().getSystemMetadataMap().get(pid); |
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identifier.setValue(pid); |
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SystemMetadata sysMeta = HazelcastService.getInstance().getSystemMetadataMap().get(identifier); |
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//Update the registration |
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DOIService.getInstance().registerDOI(sysMeta); |
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} catch (Exception e) {
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// what to do? nothing |
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} |
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} |
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/** |
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* Update the DOI registration of all ids in this server with EML formatIds |
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*/ |
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public boolean upgrade() throws AdminException {
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boolean success = true; |
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return success; |
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} |
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/** |
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* Update the registration of all DOIs with the specified guids in this server |
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* @param ids - a List of DOIs to update |
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*/ |
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public boolean upgradeById(List<String> ids) throws AdminException {
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boolean success = true; |
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try{
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updateDOIRegistration(ids); |
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} catch (Exception e) {
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String msg = "Problem updating DOIs: " + e.getMessage(); |
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log.error(msg, e); |
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success = false; |
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throw new AdminException(msg); |
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} |
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return success; |
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} |
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/** |
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* Update the registration of all DOIs in this server with the specified formatId |
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* @param formatIds - a List of formatIDs used to filter DOI selection |
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*/ |
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public boolean upgradeByFormatId(List<String> formatIds) throws AdminException {
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boolean success = true; |
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List<String> idList = new ArrayList<String>(); |
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try{
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for (String formatId: formatIds) {
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//Get all the docids with this formatId |
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List<String> docids = DBUtil.getAllDocidsByType(formatId, true, serverLocation); |
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//get the guids for each docid and add to our list |
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for(String id: docids){
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String docid = DocumentUtil.getDocIdFromAccessionNumber(id); |
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int rev = DocumentUtil.getRevisionFromAccessionNumber(id); |
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String guid = IdentifierManager.getInstance().getGUID(docid, rev); |
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idList.add(guid); |
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} |
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//Update the registration for all these guids |
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Collections.sort(idList); |
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updateDOIRegistration(idList); |
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} |
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} catch (Exception e) {
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String msg = "Problem updating DOIs: " + e.getMessage(); |
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log.error(msg, e); |
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success = false; |
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throw new AdminException(msg); |
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} |
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return success; |
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} |
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} |
| src/edu/ucsb/nceas/metacat/replication/ReplicationService.java | ||
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String serverid = ((String[]) params.get("serverid"))[0];
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serverLocation = Integer.parseInt(serverid); |
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udoi.setServerLocation(serverLocation ); |
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udoi.upgrade(); |
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out.write("Generated ORE maps for server " + serverid);
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//Get the list of IDs, if any were given |
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String ids = ((String[]) params.get("ids"))[0];
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//Get the formatId, if one was given |
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String formatIds = ((String[]) params.get("formatIds"))[0];
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//Allow DOI's to be updated by both ID and formatId |
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if((ids.length() > 0) || (formatIds.length() > 0)){
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//If at least one ID was given, update their DOI registrations |
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if(ids.length() > 0){
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String delimeter = " "; |
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String[] idArray = ids.split(delimeter); |
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List<String> idList = Arrays.asList(idArray); |
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udoi.upgradeById(idList); |
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} |
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//If at least one formatId was given, update the DOI registrations |
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if(formatIds.length() > 0){
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String delimeter = " "; |
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String[] formatIdArray = formatIds.split(delimeter); |
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List<String> formatIdList = Arrays.asList(formatIdArray); |
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udoi.upgradeByFormatId(formatIdList); |
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} |
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} |
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else{
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udoi.upgrade(); |
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} |
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out.write("Updated DOI's for server " + serverid);
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} else if (subaction.equals("removeinvalidreplicas")) {
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RemoveInvalidReplicas rir = new RemoveInvalidReplicas(); |
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int serverLocation = -1; |
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out.write("<input name='configureType' type='hidden' value='replication'/>");
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out.write("<input name='action' type='hidden' value='servercontrol'/>");
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out.write("<input name='subaction' type='hidden' value='updatedoi'/>");
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out.write("<label>Update by ID:</label>");
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out.write("<textarea name='ids'></textarea>");
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out.write("<label>Update by formatId:</label>");
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out.write("<textarea name='formatIds'></textarea>");
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out.write("<input type='submit' value='Update DOIs'/>");
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out.write("</form></td>");
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Also available in: Unified diff
Add admin service to update DOI registrations by specifying a list of formatIds or DOIs, or update all.