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metacat/src/edu/ucsb/nceas/metacat @ 9596

Name Size Revision Age Author Comment
  accesscontrol 9024 about 10 years Jing Tao Fixed a bug that the method getLocalId swallowe...
  admin 9544 almost 9 years Jing Tao Close the input stream object on the MN.replica...
  advancedsearch 6901 almost 13 years Matt Jones Properly initialize the servlet context when st...
  annotation 9463 about 9 years Jing Tao Close some prepared sql statement in the summar...
  authentication 8575 almost 11 years Jing Tao Modified the usage.
  cart 5374 over 14 years berkley refactored the sessionService to use a correct ...
  client 8748 over 10 years ben leinfelder switch to use FIleUpload instead of O'Reilly CO...
  clientview 7475 about 12 years ben leinfelder move DocInfo parsing into utilities project so ...
  database 6606 about 13 years ben leinfelder uses prepared statement instead of plain old st...
  dataone 9583 almost 9 years Jing Tao If a format id in the system metadata is regist...
  dataquery 6000 almost 14 years ben leinfelder refactor the names of these Data Manager implem...
  event 6029 over 13 years ben leinfelder add event notification for insert/update/delete...
  harvesterClient 9484 almost 9 years ben leinfelder include metacat context in the redirect after s...
  index 8889 about 10 years Jing Tao Removed the method which had the byte array att...
  lsid 8265 about 11 years ben leinfelder Refer to metacat.war deployments since those ar...
  oaipmh 8304 about 11 years Matt Jones Reviewed code for all uses of FileInputStream, ...
  plugin 5518 over 14 years ben leinfelder include MetacatHandlerPlugin interface so that ...
  properties 7781 over 11 years Jing Tao Solr will be enabled if it is in the db.enabled...
  replication 9596 over 8 years Jing Tao Made the ssl http client not moinitor the stale...
  restservice 9481 almost 9 years Jing Tao Use the ServiceFailure to replace the InvalidRe...
  scheduler 7475 about 12 years ben leinfelder move DocInfo parsing into utilities project so ...
  service 9583 almost 9 years Jing Tao If a format id in the system metadata is regist...
  shared 7475 about 12 years ben leinfelder move DocInfo parsing into utilities project so ...
  spatial 8265 about 11 years ben leinfelder Refer to metacat.war deployments since those ar...
  util 9583 almost 9 years Jing Tao If a format id in the system metadata is regist...
  workflow 6124 over 13 years Chris Jones Merged in the D1_0_6_2_BRANCH changes that incl...
AccessionNumber.java 11.6 KB 9491 almost 9 years Jing Tao Close the result and connection in the finally ...
AccessionNumberException.java 1.82 KB 3077 about 18 years Matt Jones Removed the @release@ ant token from all files ...
ArchiveHandler.java 8.4 KB 5030 over 15 years daigle Change location of PropertyService to propertie...
AssociateAccessPolicy.java 16.4 KB 6744 about 13 years ben leinfelder refactor Metacat access handling to be on a per...
AuthInterface.java 4.25 KB 8476 almost 11 years Jing Tao Add the getUserInfo method.
AuthLdap.java 54.9 KB 9441 about 9 years Jing Tao Escape the user names, group name and other inf...
AuthSession.java 10.4 KB 8652 almost 11 years Jing Tao In the authenticate method, if metacat can't ge...
AuthStub.java 7.64 KB 5030 over 15 years daigle Change location of PropertyService to propertie...
AuthTLSException.java 1.54 KB 5158 about 15 years daigle Separate code to do tls and non-tls authenticat...
AuthTest.java 9.28 KB 5030 over 15 years daigle Change location of PropertyService to propertie...
BasicNode.java 6.68 KB 3077 about 18 years Matt Jones Removed the @release@ ant token from all files ...
CatalogMessageHandler.java 2.97 KB 3077 about 18 years Matt Jones Removed the @release@ ant token from all files ...
CommentNode.java 2.13 KB 3077 about 18 years Matt Jones Removed the @release@ ant token from all files ...
ContentTypeProvider.java 21.1 KB 9492 almost 9 years Jing Tao Make sure to close the prepared statement on th...
DBDTDHandler.java 5.38 KB 5015 over 15 years daigle Create database and shared directories for data...
DBEntityResolver.java 17.6 KB 9492 almost 9 years Jing Tao Make sure to close the prepared statement on th...
DBQuery.java 107 KB 8304 about 11 years Matt Jones Reviewed code for all uses of FileInputStream, ...
DBSAXHandler.java 30.3 KB 9583 almost 9 years Jing Tao If a format id in the system metadata is regist...
DBSAXNode.java 16.8 KB 6606 about 13 years ben leinfelder uses prepared statement instead of plain old st...
DBSimpleQuery.java 7.44 KB 5015 over 15 years daigle Create database and shared directories for data...
DBTransform.java 14.7 KB 9391 about 9 years ben leinfelder Use conditional method for retrieving server UR...
DBUtil.java 27.9 KB 7015 almost 13 years ben leinfelder overload getAllDocidsByType() method for backwa...
DBValidate.java 10.8 KB 5030 over 15 years daigle Change location of PropertyService to propertie...
DistributionSection.java 3.07 KB 5090 about 15 years daigle Move access control source to it's own directory.
DocumentIdQuery.java 4.5 KB 5731 about 14 years ben leinfelder typo - "dataset/pubDate"
DocumentIdentifier.java 7.53 KB 6595 about 13 years ben leinfelder http://bugzilla.ecoinformatics.org/show_bug.cgi...
DocumentImpl.java 201 KB 9583 almost 9 years Jing Tao If a format id in the system metadata is regist...
DocumentImplWrapper.java 4.08 KB 9583 almost 9 years Jing Tao If a format id in the system metadata is regist...
EML201DocumentCorrector.java 5.84 KB 6606 about 13 years ben leinfelder uses prepared statement instead of plain old st...
ElementNode.java 5.45 KB 4080 over 16 years daigle Merge 1.9 changes into Head
Eml200SAXHandler.java 120 KB 8630 almost 11 years Peter Slaughter get guid from online id for call to SyncAccessP...
Eml210SAXHandler.java 71.6 KB 8560 almost 11 years Peter Slaughter Sync access policy between MN -> CN when access...
ErrorHandledException.java 1.53 KB 4950 over 15 years daigle Add archival read funtionality (jar/kar/war files)
EventLog.java 27.2 KB 9489 almost 9 years Jing Tao Add the dataone create event mapping to the sel...
EventLogData.java 3.39 KB 9098 almost 10 years Jing Tao The constrcutor of EventLogData missed the user...
IdentifierManager.java 91.5 KB 9482 almost 9 years Jing Tao Use the "order by" to preserve the nodes order ...
IndexingQueue.java 10.9 KB 8164 over 11 years Jing Tao If the pathquery engine is disabled, the xml pa...
IndexingTimerTask.java 4.47 KB 8164 over 11 years Jing Tao If the pathquery engine is disabled, the xml pa...
McdbDocNotFoundException.java 2.94 KB 5282 almost 15 years Matt Jones Added initial support for arbitrary string iden...
McdbException.java 3.49 KB 5752 about 14 years ben leinfelder use detected XML encoding when reading/writing ...
MetaCatServlet.java 52.1 KB 9583 almost 9 years Jing Tao If a format id in the system metadata is regist...
MetacatHandler.java 159 KB 9583 almost 9 years Jing Tao If a format id in the system metadata is regist...
MetacatProfiler.java 7.6 KB 5607 about 14 years berkley profiler code for metacat
MetacatResultSet.java 4.69 KB 5363 over 14 years berkley implementing getObjects in CrudService.
MetacatURL.java 9.32 KB 3077 about 18 years Matt Jones Removed the @release@ ant token from all files ...
MetacatVersion.java 2.06 KB 6124 over 13 years Chris Jones Merged in the D1_0_6_2_BRANCH changes that incl...
NodeComparator.java 3.49 KB 3077 about 18 years Matt Jones Removed the @release@ ant token from all files ...
NodeRecord.java 6.91 KB 6012 almost 14 years ben leinfelder add support for temporal element query in pathq...
PINode.java 2.17 KB 3079 about 18 years Matt Jones Eliminated unneeded log information in source c...
PathIndexEntry.java 2.87 KB 6012 almost 14 years ben leinfelder add support for temporal element query in pathq...
PermissionController.java 36.4 KB 9455 about 9 years ben leinfelder merge from branch: only check for d1 rightshold...
QueryGroup.java 14.1 KB 7407 about 12 years ben leinfelder simplify the xml_access query, and instead use ...
QueryResultTableBuilder.java 3.19 KB 3799 over 16 years Jing Tao Add a new class will build query result able in...
QuerySpecification.java 41.3 KB 7495 almost 12 years ben leinfelder group user_owner clause as "AND (... OR .... OR...
QueryTerm.java 24.2 KB 6740 about 13 years ben leinfelder retry: add node name in the correct order for p...
ReadOnlyChecker.java 1.87 KB 9481 almost 9 years Jing Tao Use the ServiceFailure to replace the InvalidRe...
RelationHandler.java 8.24 KB 7403 about 12 years ben leinfelder remove morpho.jar -- moved needed classes into ...
RemoteDocument.java 17.1 KB 8802 over 10 years ben leinfelder remove dependency on HttpMessage that was in th...
SchemaLocationResolver.java 13 KB 9583 almost 9 years Jing Tao If a format id in the system metadata is regist...
Sitemap.java 14.4 KB 7766 over 11 years Matt Jones Updated documentation, and added modification d...
SubTree.java 7.7 KB 5311 over 14 years daigle Merge 1.9.2 changes back into the trunk
TextNode.java 2.09 KB 3077 about 18 years Matt Jones Removed the @release@ ant token from all files ...
Version.java 2.92 KB 4080 over 16 years daigle Merge 1.9 changes into Head
XMLQueryresultAccess.java 3.31 KB 7475 about 12 years ben leinfelder move DocInfo parsing into utilities project so ...

Latest revisions

# Date Author Comment
9596 03/28/2016 04:46 PM Jing Tao

Made the ssl http client not moinitor the stale connections.
9594 03/28/2016 02:53 PM Jing Tao

Use the new AutoCloseInputStream wrapper for replication. It will close but http client and input stream when the inputStream.close method is called.
9583 03/23/2016 03:57 PM Jing Tao

If a format id in the system metadata is registered in the xml_catalog table, we will use the schema location for the format id to validate the xml instance;
otherwise, we will use our previous way.
9544 03/07/2016 01:32 PM Jing Tao

Close the input stream object on the MN.replicate method.
9542 03/04/2016 11:06 AM ben leinfelder

use SM.fileName if we have it. https://projects.ecoinformatics.org/ecoinfo/issues/6970
9541 03/04/2016 10:31 AM ben leinfelder

ensure there is a file extension included for the data files in a package download. https://projects.ecoinformatics.org/ecoinfo/issues/6970
9538 02/29/2016 10:54 AM Jing Tao

Add code to print the the stack trace on the getPackage method in order to help us to identity some tmp file issues.
9534 02/25/2016 04:29 PM Chris Jones

Also handle authentication tokens when uploading data (action=upload) by using Ben's RequestUtil.getSessionData() changes.

refs https://github.nceas.ucsb.edu/KNB/arctic-data/issues/43
9523 02/19/2016 12:32 PM Jing Tao

In the isScienceMetacata method, the ServiceFailure exception shouldn't be caught anymore, since the code doesn't throw it.
9520 02/09/2016 05:14 PM ben leinfelder

allow Metacat API calls to be made by clients providing their identity with a DataONE auth token. https://github.nceas.ucsb.edu/KNB/arctic-data/issues/43

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