Activity
From 01/17/2011 to 02/15/2011
02/15/2011
02/14/2011
- 02:48 PM Bug #5262: EML document owner can't read the document
- Hrrm, it seems our code doesn't trim the username.
In AuthLdap.authenticateTLS:
I added a information line to displ... - 01:47 PM Bug #5262: EML document owner can't read the document
- Hi, Matt:
Yes, the user name with extra space can login. The username field in EcogridWriter is used for login. The ... - 11:54 AM Bug #5262: EML document owner can't read the document
- Trimming strings on input like this is always dangerous. My guess is that the bug arises because someone through a '...
- 11:42 AM Bug #5262: EML document owner can't read the document
- Somehow, in EcogridWriter actor, author put an extra space after uid=kepler,o=unaffiliated,dc=ecoinformatics,dc=org.
... - 02:03 PM Revision 5956 (metacat): Updated DROP script that was missing tables and sequences.
- 11:45 AM Revision 5955 (metacat): added file extension for txt or csv files
- 11:39 AM Revision 5954 (metacat): correctly pass the search class and value when perfroming Protocol-based and Measurement-based queries (copy and paste oversight).
02/13/2011
- 11:20 AM Revision 5953 (metacat): To support the generatemissingsystemmetadata REST call, modified CrudService.createSystemMetadata() to use DataoneEMLParser and further determine object formats from EML metadata. Formats currently supported are text/plain, text/csv, image/[jpg|jp2|bmp|tiff|png], and only for EML documents with 'ecogrid://' defined entity urls.
- Todo: transition to using the EML Data Manager library's DataPackage parsers to handle a broader set of metadata type...
02/11/2011
- 02:56 PM Revision 5952 (metacat): make Data Object link more subtle since it now appears for each attribute
- 01:57 PM Revision 5951 (metacat): update skin to use new annotation schema - http://ecoinformatics.org/sms/annotation.1.0beta1
- 01:48 PM Revision 5950 (metacat): adding more debuggin and fixing bug with systemmetadata
- 11:42 AM Revision 5949 (metacat): new d1_common jar
- 10:46 AM Bug #5300: SchemaLocationResolver fails to download included xsd files
- Add a new class XMLSchemaPaser which can extract the included schema information.
In XMLSchemaService class, add a ne...
02/10/2011
- 06:09 PM Revision 5948 (metacat): Make the schema with included schemas valid.
- 06:08 PM Revision 5947 (metacat): Add a xml file for inserting during test.
- 06:07 PM Revision 5946 (metacat): Add a method to test download a schema with included schemas.
- 06:06 PM Revision 5945 (metacat): Add code to download the included schema.
- 04:17 PM Revision 5944 (metacat): fixed replication bug where systemmetadata was not getting procssed correctly
- 10:56 AM Revision 5943 (metacat): think I fixed the connection problem. one connection in IdentifierManager was being leaked. added more debug info in case it happens again
- 10:27 AM Revision 5942 (metacat): Add a test file for XMLSchemaServcieTest.
- 10:27 AM Revision 5941 (metacat): Add a static method to get base url base on a schema url.
02/09/2011
- 05:03 PM Revision 5940 (metacat): Add a junit test file for testing the XMLSchemaParser class.
- 05:02 PM Revision 5939 (metacat): Add test schema for downloading included xsd file.
- 05:00 PM Revision 5938 (metacat): A sax handler class can get included schema path.
- 02:37 PM Bug #5300: SchemaLocationResolver fails to download included xsd files
- Here is a way probably resolve this issue:
In edu.ucsb.nceas.metacat.service.XMLSchemaService lcass, we will add two... - 01:40 PM Bug #5300 (Resolved): SchemaLocationResolver fails to download included xsd files
- I am trying to insert an eml document with embedded sensorML into metacat.
But i get the error:
knb 20110209-11:20:... - 11:41 AM Bug #4307: Upgrade Geoserver to prevent Metacat crashes
- Shape files were corrupted by the ant build (filtered copy treated them as text).
Configuration allows for bypass and... - 11:37 AM Bug #2188: replace web client with OpenLayers
- New OpenLayers implementation is now in trunk - old MapBuilder has been removed.
- 11:36 AM Revision 5937 (metacat): remove old spatial templates
- http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2188
- 11:34 AM Revision 5936 (metacat): remove JPL NASA layer - no longer operational
- 10:02 AM Revision 5935 (metacat): photoshop file for creating the on/off query widget for openlayers
- 09:55 AM Revision 5934 (metacat): remove sanparks boundaries from the default map, but allow them to be added as an additional layer from the saeon/sanparks skin.
- use css to style the spatial query search widget control
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2188
02/08/2011
- 02:08 PM Revision 5933 (metacat): added some debug info to DBConnectionPool
- 02:06 PM Revision 5932 (metacat): include title for the spatial query control widget (on hover)
- 12:06 PM Revision 5931 (metacat): removed comments from crudservicetest
- 12:05 PM Revision 5930 (metacat): fixed typo that prevented replication
- 11:46 AM Revision 5929 (metacat): fixed node response bug
- 11:30 AM Revision 5928 (metacat): add custom Pan/Zoom/Query control. http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2188
- 11:30 AM Bug #2188: replace web client with OpenLayers
- added new map control for metacat spatial query. now you can Pan/Zoom/Search depending on which control is selected
- 10:25 AM Bug #5288: Metacat got "java.lang.OutOfMemoryError: PermGen space" after new geoserver update
- GeoServer recommends increasing your container's default settings:
http://docs.geoserver.org/stable/en/user/productio...
02/07/2011
- 03:41 PM Revision 5927 (metacat): fixed update problem
- 02:49 PM Revision 5926 (metacat): put the pid in the info section of the url
- 11:44 AM Bug #5294: Enable Junit test on http://dev-testing.dataone.org:8080/hudson/job/Metacat/
- It turns out that Metacat is using a customized properties file management system.It makes the properties file more r...
- 11:31 AM Revision 5925 (metacat): Add a comment to the new target install-configured-metacat.
- 11:20 AM Revision 5924 (metacat): Using echo to replace propertyfile in order to avoiding character escape.
- 10:50 AM Revision 5923 (metacat): fixed content type problem where csv files were set as text/xml
02/04/2011
- 06:34 PM Revision 5922 (metacat): fixed problem with count in listObjects()
- 06:14 PM Revision 5921 (metacat): Cleaned up warnings, removed dead code.
- 05:53 PM Revision 5920 (metacat): Updated to most recent DataONE libraries. Updated CrudService to set the correct origin MN and auth MN in system metadata. Refactored exception passing. More work to come in generating SystemMetadata.
- 05:31 PM Bug #5294: Enable Junit test on http://dev-testing.dataone.org:8080/hudson/job/Metacat/
- in above comment, can = can NOT :)
- 05:29 PM Bug #5294: Enable Junit test on http://dev-testing.dataone.org:8080/hudson/job/Metacat/
- The first issue in above comment relates to the second one. When metacat initializes the db service, it can recognize...
- 04:54 PM Bug #5294: Enable Junit test on http://dev-testing.dataone.org:8080/hudson/job/Metacat/
- I will add the target to check the database.
I added two targets into the build.xml. One will set configutil.* to be... - 04:13 PM Bug #5294: Enable Junit test on http://dev-testing.dataone.org:8080/hudson/job/Metacat/
- This sounds good, Jing. One other issue is that the admin servlet runs SQL scripts to create/update databases, etc. ...
- 03:15 PM Bug #5294: Enable Junit test on http://dev-testing.dataone.org:8080/hudson/job/Metacat/
- I just tested if we set:
configutil.propertiesConfigured=false
configutil.authConfigured=false
configutil.skinsConfig... - 01:03 PM Bug #5294: Enable Junit test on http://dev-testing.dataone.org:8080/hudson/job/Metacat/
- <matt> another possibility would be to create a new target in the build that sets those properties explicitly for the...
- 11:54 AM Bug #5294 (New): Enable Junit test on http://dev-testing.dataone.org:8080/hudson/job/Metacat/
- Currently in hudson test, the build will run "ant clean war" to verify the new commitment code would not break the bu...
- 04:45 PM Revision 5919 (metacat): Add a target to change the configuration value to be true.
- 01:05 PM Revision 5918 (metacat): removed debug statements
- 12:39 PM Revision 5917 (metacat): fixed bugs in listObjects
- 11:30 AM Revision 5916 (metacat): Add in correct node references in system metadata.
- 10:29 AM Revision 5915 (metacat): Cleanup harvester exceptions and generics.
- 06:17 AM Revision 5914 (metacat): remove httpclient 3.1 and custom-built httpclient.jar
- rework MetacatClient (and other classes) to use httpclient 4
updated build to not create httpclient.jar
encoding test... - 05:57 AM Revision 5913 (metacat): blank configuration value should be treated the same as null
02/03/2011
- 07:45 PM Revision 5912 (metacat): Fix the MetadataTypeRegisterTest because it had the wrong URI for METS.
- 05:10 PM Revision 5911 (metacat): Added download links.
- 05:06 PM Revision 5910 (metacat): the new name of the jar file.
- 05:05 PM Revision 5909 (metacat): rename this jar file to xercesImpl-2.11.0.jar
- 04:54 PM Revision 5908 (metacat): Additional layout and styles for metacat documentation.
- 04:01 PM Bug #5291: Need update xerces jar file
- Here are what i did:
1) Removed the following files:
tao@pacific:~/project/metacat$ rm ./lib/spatial/geoserver/WEB-IN... - 03:58 PM Bug #5291 (Resolved): Need update xerces jar file
- xcerces 2.7 complains that the sensorML schema is invalid. However, xmlSpy and oxygen don't.
I tried to use xerces... - 03:42 PM Revision 5907 (metacat): UPdated documentation for the web.
- 03:39 PM Revision 5906 (metacat): few bug fixes for listObjects
- 03:38 PM Revision 5905 (metacat): Add new version of jar file from xerces 2.11.0.
- 03:37 PM Revision 5904 (metacat): Add a new version of aml-apis jar file from xerces 2.11.0.
- 03:36 PM Revision 5903 (metacat): Add new version of xerces jar file.
- 03:36 PM Revision 5902 (metacat): Add jar file from xerces 2.11.0.
- 03:34 PM Revision 5901 (metacat): remove old version of xerces jar file.
- 03:34 PM Revision 5900 (metacat): Remove redundant jar file.
- 03:33 PM Revision 5899 (metacat): remove redundant jar file.
- 03:32 PM Revision 5898 (metacat): remove redundant jar file.
- 03:29 PM Revision 5897 (metacat): remove redundant jar file.
- 03:28 PM Revision 5896 (metacat): Remove redundant jar file.
- 03:25 PM Revision 5895 (metacat): added code to do database query for listObjects
- 02:06 PM Revision 5894 (metacat): new properties for d1 MN
- 01:19 PM Revision 5893 (metacat): Cleaned up unused imports.
- 10:21 AM Revision 5892 (metacat): update to ECOGRID_1_2_2RC2 tag
- 09:49 AM Revision 5891 (metacat): remove the empty dir.
- 09:47 AM Revision 5890 (metacat): This is redundant to the WorkflowSchedulerCleintTest in wsfscheduler svn module.
- 09:21 AM Revision 5889 (metacat): use more unique scope (document id prefix) so that getlastdocid runs successfully. use superclass generateDocumentId() method
02/02/2011
- 05:36 PM Revision 5888 (metacat): pass the root exception message up the call chain so that it can effectively be reported as a helpful error message. also, the JUnit test expects the specific error message (SchemaRegistryTest)
- 03:52 PM Revision 5887 (metacat): adding fields for additional system metadata info
- 11:43 AM Revision 5886 (metacat): use the read() method instead of manually calling with parameters
- 10:54 AM Revision 5885 (metacat): new paths for metacat populator
- 10:54 AM Revision 5884 (metacat): new common and client jar
02/01/2011
- 07:15 PM Revision 5883 (metacat): remove this optional ant jar - seems to conflict with other versions of ant when running junit tests. also, it's not needed for the geotools use we have
- 05:13 PM Bug #5288 (Resolved): Metacat got "java.lang.OutOfMemoryError: PermGen space" after new geoserver update
- Today, I updated my metacat source tree to get the changes on the geoserver part.
After installing the new Metaca... - 05:05 PM Revision 5882 (metacat): Add the junit jar file back to the lib. There is no change needed in build.xml.
- 12:13 PM Revision 5881 (metacat): some new code for debugging mmp
- 11:53 AM Revision 5880 (metacat): Update to v1.10.0 and include new GeoServer configuration instructions
- 11:52 AM Revision 5879 (metacat): correct typo in instructions
- 10:54 AM Revision 5878 (metacat): Using <xsl:value-of select="."/> to replace <xsl:value-of select="./"/>. Somehow, the latter is not valid anymore.
01/31/2011
- 04:16 PM Revision 5877 (metacat): include bypass option
- 03:51 PM Revision 5876 (metacat): removing old httpclient jar
- 03:49 PM Revision 5875 (metacat): removing utilities.jar
- 03:48 PM Revision 5874 (metacat): updated the populator
- 03:48 PM Revision 5873 (metacat): new http libs
- 03:31 PM Revision 5872 (metacat): include geoserver.war in the 'install' target but also allow 'bypass' option when geoserver is not deployed next to metacat
- 01:52 PM Revision 5871 (metacat): merge documentation from 1.9.3 branch before adding 1.10.0 changes
- 01:30 PM Revision 5870 (metacat): added code to run an squery for listObjects instead of an anyfield query
- 01:22 PM Revision 5869 (metacat): fixed compile errors
- 11:56 AM Revision 5868 (metacat): remove "Bypass" action
- http://bugzilla.ecoinformatics.org/show_bug.cgi?id=4307
- 11:55 AM Revision 5867 (metacat): always re-write web.xml in case geoserver has been redeployed
- http://bugzilla.ecoinformatics.org/show_bug.cgi?id=4307
- 11:29 AM Revision 5866 (metacat): include geoserver.war when building the distribution
- move xalan jar into common lib where it is used to compile lsid support
http://bugzilla.ecoinformatics.org/show_bug.c...
01/28/2011
- 07:22 PM Revision 5865 (metacat): do not use "filtering" on binary shape files - they will be corrupt
- http://bugzilla.ecoinformatics.org/show_bug.cgi?id=4307
- 05:53 PM Bug #4307: Upgrade Geoserver to prevent Metacat crashes
- I seem to have introduced invalid shapefiles - perhaps when committing them to SVN. Will have to check alternate chec...
- 05:34 PM Bug #4307: Upgrade Geoserver to prevent Metacat crashes
- keeping this opened until additional tasks are completed:
-package geoserver.war (v2.0.2) along with Metacat's knb.wa... - 12:16 PM Bug #4307: Upgrade Geoserver to prevent Metacat crashes
- We are now using Geotools 2.6.4 (from Geoserver 2.0.2) to read/write the shape files.
Geoserver is deployed in a diff... - 05:30 PM Bug #2188: replace web client with OpenLayers
- TODO:
-create a way for skins to reuse the common map rendering but still perform spatial queries with their results ... - 12:19 PM Bug #2188: replace web client with OpenLayers
- Re-implementing the features we have in MapBuilder in OpenLayers:
1. named locations drop down
2. spatial query when ... - 05:18 PM Revision 5864 (metacat): use the demis layer as default
- 05:12 PM Revision 5863 (metacat): remove cache files - each instance should create these when needed
- 03:54 PM Revision 5862 (metacat): use OpenLayers implementation for rendering map/spatial search - has it's own copy of locations and a different bound for the map
- http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2188
- 03:53 PM Revision 5861 (metacat): use OpenLayers implementation for rendering map/spatial search
- http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2188
- 03:52 PM Revision 5860 (metacat): Modified MetacatPopulator to deal with change in D1Client static methods.
- 03:30 PM Revision 5859 (metacat): include name attribute for location selection widget
- 03:00 PM Revision 5858 (metacat): break the map generation into parts for easier re-use/customization in other skins
- 01:59 PM Revision 5857 (metacat): added more code for new mmp requests
- 12:25 PM Bug #2180: Make it easier for admin to add new layers
- It's true that Geoserver does all of this except including the new layer in a rendered map in Metacat.We could includ...
- 12:21 PM Bug #4680: Geoserver StringIndexOutOfBoundsException
- We are now using Geotools 2.6.4
- 12:09 PM Revision 5856 (metacat): include standard list of named locations - zoom map to that location when selected
01/27/2011
- 03:59 PM Revision 5855 (metacat): include default password for geoserver admin - though metacat need not really know what it is.
- 03:51 PM Revision 5854 (metacat): bug fixes
- 03:23 PM Revision 5853 (metacat): already have log4j (1.2.12)
- 03:21 PM Revision 5852 (metacat): remove older jars to avoid duplication/complications
- 03:08 PM Revision 5851 (metacat): refactor checksum and some other stuff
- 02:44 PM Revision 5850 (metacat): include a default location for the Geoserver data directory (under the metcat deployment)
- 12:17 PM Revision 5849 (metacat): added some debug lines
- 09:52 AM Revision 5848 (metacat): new common lib
01/26/2011
- 04:11 PM Revision 5847 (metacat): rework geoserver configuration:
- -geoserver context is set to 'geoserver' by default, but can be reconfigured
-data directory is set in the geoserver ... - 04:06 PM Revision 5846 (metacat): add boolean return to indicate whether or not a property was modified
01/25/2011
- 05:02 PM Revision 5845 (metacat): invoke spatial search when bounding box is drawn or click on map
- 03:50 PM Revision 5844 (metacat): trying to get the new MMP handler working with ResourceHandler
- 03:18 PM Revision 5843 (metacat): updating commons-fileupload to 1.2.2
- 02:49 PM Revision 5842 (metacat): Change the ecogrid tag to tags/ECOGRID_1_2_2_RC1.
- 01:57 PM Revision 5841 (metacat): fullclean will remove entire ecogrid dir rather than just two files.
- 01:19 PM Revision 5840 (metacat): update the SLD for data boundary layer
- 11:08 AM Revision 5839 (metacat): omit spatial exclusions that do not exist (part of the geoserver removal)
01/24/2011
01/21/2011
- 04:50 PM Revision 5837 (metacat): Change the column width again.
- 04:46 PM Revision 5836 (metacat): change the column width of the workflow run table.
- 04:40 PM Revision 5835 (metacat): use local shape files if the Geoserver env variable is not set. They might also be the same
- 04:28 PM Revision 5834 (metacat): Fixed a bug that pdf file name can't be got.
- 04:18 PM Revision 5833 (metacat): include new data dir contents (will be pointed at by geoserver 2.0.2)
- 04:15 PM Revision 5832 (metacat): remove old data contents
- 04:11 PM Revision 5831 (metacat): geoserver upgrade (in TRUNK thins time!):
- -remove embedded geoserver
-include geotools api and update spatial harvesting - 03:08 PM Revision 5829 (metacat): geoserver upgrade:
- -remove embedded geoserver
-include geotools api and update spatial harvesting
-include simple template for using ma... - 02:27 PM Revision 5827 (metacat): new jar with common code
- 02:27 PM Revision 5826 (metacat): new mmp code
- 10:44 AM Revision 5825 (metacat): Change unschedule to disable, reschedule to enable.
- 10:43 AM Revision 5824 (metacat): Change the column size according the text change.
01/20/2011
- 05:46 PM Revision 5823 (metacat): Modify the column width to show the Delete link.
- 04:13 PM Revision 5822 (metacat): Add more parameters - workflowid, workflowname and karid to the unscheduleWorkflow, rescheduleWorkflow and delete actions.
01/19/2011
- 03:02 PM Revision 5821 (metacat): Add more parameters such as sessionid, authenticationURL and authorizationURL for unscheduleWorkflow, rescheduleWorkflow and delete action.
- 02:37 PM Revision 5820 (metacat): this dir is empty now and should be removed
- 10:47 AM Revision 5819 (metacat): Fixed a syntax error.
01/18/2011
- 06:28 PM Revision 5818 (metacat): Add more parameters to the servlet.
- 05:09 PM Revision 5817 (metacat): Add authorizationPath,authenticationPath and queryPath for workflow scheduler.
- 05:04 PM Revision 5816 (metacat): include 'value' translations when searching EML 2.1.1 (squery and query actions)
- 05:03 PM Revision 5815 (metacat): use a non-runtime classpath to locate the axis tasks (required when I upgraded to ant 1.8)
- 04:41 PM Revision 5814 (metacat): Add a new property - destination reporsitory name in execution engine part.
- 04:38 PM Revision 5813 (metacat): Add new selection - destination repository in tpc scheduler.
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