Metacat

add note about restarting Tomcat when using Metacat indexing.

Added the documentation for the new MetacatUI theming mechanism. Make some styling changes to the documentation and configuration pages and added Bootstrap and FontAwesome.

FontAwesome and Bootstrap are imported locally rather than via CDN. Updated the docs screenshots to the new style.

Adding a protocol to the <link href=""> for the external CSS

Pull the external stylesheets in by <link> rather than @import for faster page load

Simplified the importing of images and stylesheets so that both /admin and /docs pull from /docs

Made some CSS changes to the "Go" button in the docs because it was off by a few pixels in three different browsers. Also changed the admin config landing page links to look like buttons

Matched the admin config pages to the default metacatUI theme. Changed the background image of the docs and config pages to a big cat for some metacat branding.

Redesigned the /admin configuration pages to better match our new MetacatUI design. Looks good in both /context/admin view and the #external view using metacatUI

add logout links to header and footer. https://projects.ecoinformatics.org/ecoinfo/issues/3761

add note about new metacatUI themes to the skin config page. https://projects.ecoinformatics.org/ecoinfo/issues/6068

use sleeker "?" icon for the admin help links

correct the "?" links in the admin pages to the docs pages that are deployed as part of metacat.

allow SM resynch to be executed any time, not just during start up.
https://redmine.dataone.org/issues/3116

correct typo for "dataone.mn.services.enabled" property on the admin screen checkbox

Globally change the property 'dataone.memberNodeId' to 'dataone.nodeId'. This is more useful for both MNs and CNs implemented in Metacat. Also, change D1NodeService.getLogRecords() to return log entries with the actual node id rather than the IP address (looks like a cut/paste error)....

include member node id text field now that the CN is not assigning random Ids.
https://redmine.dataone.org/issues/2308

dataone configuration and registration enhancements:
-include flag to disable D1 services, currently only the MN side enforces this
-do not allow multiple registration attempts if we have just submitted and are awaiting Node verification by the CN.
-do not allow configuration "bypass" if D1 settings have been configured previously....

Show "Update" button if this MemberNodeId is already registered with DataONE, otherwise use the "Register" label

Updated configuration documentation in admin guide for Metacat DataONE section. Changed links in configuration utility to point at the Admin guide.

Modify admin configuration to include default replication policy. Extensively revised the DataONE configuration page, including new wording for intro, improved tooltips throughout, new arrangement of sections, and other cosmetic changes.

Remove ability to edit NodeID from D1 configuration page. Fix update of contactSubject and dataone.ore.generated property name.

store D1 configuration properties in the main backup so that they persist between upgrades.

add description about what becoming a Member Node entails

remove systemmetadata replication option -- it is no longer a separate document in metacat

configure synch schedule in the admin screen
https://redmine.dataone.org/issues/1933

correct path for question mark icon -- though the documentation link is broken

replication control panel now fully implemented as an admin configuration screen
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=5528

DataONE MN registration/configuration is now its own configuration page in the admin interface.
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=5531

remove reference to tomcat5.5 in favor of tomcat6. including the "custom" start up script that used the sun jdk -- this can be configured rather than coded into the script.

expose spatial cache regeneration option in the admin interface

Merged in the D1_0_6_2_BRANCH changes that include the transition from ObjectFormat calls to ObjectFormatCache calls.

correct typo in instructions

include bypass option

remove "Bypass" action
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=4307

rework geoserver configuration:
-geoserver context is set to 'geoserver' by default, but can be reconfigured
-data directory is set in the geoserver web.xml file (we have a template, set the value accordingly, then overwrite the deployed version in the geoserver webapp)...

Change location of PropertyService to properties directory

Persist skin properties across installations

Change MetaCatVersion to MetacatVersion

Fix references to db classes that were moved and refactoring missed.

Create database and shared directories for database management code and shared code respectively.

Populate admin login user dropdown with configured admins

Use context url instead of server IP. Server IP breaks if the server does not have an externally facing IP (behind a proxy server)

Go back to main context page when user cancels login.

validate only required fields.

add the ability to validate that only required fields are populated.

change metacatconfigure.html to metacat-configure.html

Add backup configuration page

Removed extra %> that showed up on page

Remove application.default-style from the global configuration screen and activate it in the skins configuration.

Update tomcat location to /etc/init.d version used in user installation instructions

Remove organization from login screen. Require fully qualified user name.

change generic authentication properties from ldap.* to auth.*

rename ldap-configuration.jsp to auth-configuration.jsp

Updated geoserver password help links

Rename geoserverconfigure.html to geoserver-manual-configure.html

moved footer section outside of if statement so it always shows up.

Added header and footer sections that allow admin to log in as different user and to see user documentation.

Use validation for form submiTtal. This validates that all fields are populated.

Change geoserver configure message to be reconfigure when geoserver is in bypass mode

Add support email to configuration error messages

Show selected value in dropdown field

Fix bug where skin configs don't read backup properties correctly for checkboxes.

adjust hiding section format

reference admin.js

fix formatting by adding div closing tag

Clean up some configuration form formatting

Replace tables with css

Initial addition of geoserver password configuration page

Move closing divs into jsp if statement

Add geoserver section. Remove organization section for now. Allow user to go directly to metacat after first configuration.

Add a cancel button

remove help icon from organization names. Change metaCatProperty reference to orgProperty.

Fix question mark help links

Change the metacat section to read Metacat Global Properties

Add support for separate LDAP and organization level configurations

Add description under form fields

remove <p> formatting

Populate password (hidden) on configuration form

Clean up the way default radio works

Clean up formatting on configuration pages

Align submit buttons

change request attribute name from metaCatVersion to metacatVersion

Reformat Checkbox

Merge 1.9 changes into Head