Metacat

Added service availability properties for each of the MN services.

Added service version properties for each of the MN services.

Add a dataone.serviceName property (set to 'd1') to remove hardcoded 'd1' strings in the codebase.

include different (non pisco) referral account (merge from 1.9.5 branch)
include upgrade sql scripts

Merged in the D1_0_6_2_BRANCH changes that include the transition from ObjectFormat calls to ObjectFormatCache calls.

add additionalMetadata/metadata/spatialResolution/value and additionalMetadata/metadata/spatialResolution/units for indexing. Also add missing comma behind additionalMetadata/moderatorComment

Removed hardcoded D1 node type in ResourceHandler and added in a new 'dataone.nodeType' property. Also added 'dataone.coordinatingNodeBaseURL' property which points to the CN that stores the authoritative object format list. If this instance of Metacat is a CN, it may point to itself.

add support for temporal element query in pathquery
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2084

add otherEntity physical elements to indexPaths (ndp)

add paths to indexPaths, and kar namespaces to indexNamespaces for Kepler Workflow Run Manager run-kar queries

include temporal coverage dates in the path index - (for opendap metadata queries)

new properties for d1 MN

include default password for geoserver admin - though metacat need not really know what it is.

rework geoserver configuration:
-geoserver context is set to 'geoserver' by default, but can be reconfigured
-data directory is set in the geoserver web.xml file (we have a template, set the value accordingly, then overwrite the deployed version in the geoserver webapp)...

Add authorizationPath,authenticationPath and queryPath for workflow scheduler.

Add a new property - destination reporsitory name in execution engine part.

include value elements for translations in EML 2.1.1

add support for EML 2.1.1

new values for updated schemas

fixing files I didn't mean to check in

fixed a couple bugs with dates and fixed a major bug where metacat was reading the entire document from the database everytime a DocumentImpl instance was created even though it didn't need to

updating system metadata query doc type

new config changes

don't include the semtools plugin in the default config

remove chad's local changes (server, db, etc) - but preserve the D1 config values that were added

new values for mets namespace

moved the dataone types to the metacat.properties file

include MetacatHandlerPlugin interface so that other projects [semtools] can extend the actions handled by Metcat without editing the codebase directly. The SemtoolsPlugin is the prototype for this and can be registered using the Metacat admin interface. Note that the plugin implementation class and supporting jars must be included in the webapp in order for the request to be handled correctly (the semtools build is injecting these as part of it's build process).

include 1.9.3 upgrade script in trunk

reverting accidental cahgnes

fixing another null auth token bug

reverting accidentally committed changes

trying another build../cicore/cn-buildout/dataone-cn-metacat/usr/share/metacat/knb.war

Merge 1.9.2 changes back into the trunk

Adding a new property to be used as an identifier prefix by default.

Modified table structure to change identifiers table (previously unused) to
represent a mapping between arbitrary string identifiers and metacat docids.
More information in https://trac.dataone.org/ticket/361. Modifications to
Oracle schemas were made but not tested.

add method name to log messages and create configured thresholds for warning messages

added a commented out line for auth.moderators for the parc system. This will get uncommented on the parc system and the existing auth.moderators will be commented out.

added parc to list of available skins.

special handling for RDF namespace documents (semtools project)

Add session Validation action and session timeout functionality.

remove base dir definitions from configuration

Change MetaCatVersion to MetacatVersion

include first as an available skin

replace // with #

Created new AuthStub class to always authenticate.

Add upgrade scripts for 1.9.2 (scheduler tables)

Updates primarily for final workflow and run xml metadata design

Added tpc workflow search and browse capabilities

Bug 3835: Design and implement OAI-PMH compliant harvest subsystem
1. Refactor the 'eml' metadataPrefix into a distinct metadataPrefix value (and corresponding crosswalk class) for each EML version:
eml-2.0.0, eml-2.0.1, eml-2.1.0. (In recent VTC discussion, we decided not to add support for the older 'beta' versions of EML 2.0.0.)...

Bug 3835: Design and implement OAI-PMH compliant harvest subsystem
Add support for request parameter "metadataPrefix=eml". This returns EML 2.1.0 records in an OAI-PMH format. EML 2.0.0 and 2.0.1 documents are first transformed to EML 2.1.0 using the eml201to210.xsl stylesheet that is packaged with the EML Utilities.

Begin development for Bug 3835: Design and implement OAI-PMH compliant harvest subsystem

Update version to 1.9.1. Add nrs ldap properties to configuration.

add UCNRS LDAP properties

Increase database.maximumConnections from 25 to 200

Format indexPaths in metacat.properties. Remove from build.properties and build.xml. Move indexPath list getter from MetacatUtil to SystemUtil.

remove semicolon at the end of xml.useFullSchemaValidation property.

Allow for backup properties to be written to context based subdirectory of the external configuration directory. This allow multiple instances of metacat to be run side by side.

Update xml paths for 2.1.0 access structure. Added the 2.1.0 path for indexing. Changed from 2.0 to 2.1.0 for querying.

Get the organization list from org.name.<orgname>= property. Add these values back into metacat.properties.

Add back the auth.base variable to metacat.properties. Use this variable when creating ldap distinguished name.

Added backup directory properties

add lter, ltss and saeon skins configurations.

Add kepler to available skins

added moderators back to metacat.properties

Add release info property to provide a brief description of the release (release candidate info mostly)

Remove redundant moderator properties, which should instead be controlled per-skin

change generic authentication properties from ldap.* to auth.*

Added test properties

Added useFullSchemaValidation flag to toggle schema validation.

Change unaffliated to match the LDAP name

Change pisco test user organization to PISCO

Add functionality to write and read metadata documents to and from the file system.

move test properties to the bottom

remove skins registry values from global config. These are now in skins specific properties files in the skins directories.

default to "local" services by commenting out the KNB-specific ones

Update properties documentation

Add lter test accounts

Convert properties to camel case

add ability to access protected data via the datamanager/dataquery feature.
Note: the datamanager features rely on the ecogrid stubs being available in Metacat. When Metacat is installed with ecogrid enabled, the required jars are included in the war...something to keep in mind.

add dataquery (from EML's Data Manager library) to the metacat servlet actions

Comment out skins registry properties

add application.tempDir

qualify xml and eml properties with an xml. prefix

qualify more propertynames

Change sitemapInterval property to be sitemap.interval. Add testing property

Add geoserver configuration values

Reorder database properties

Consolidation of property names in register-dataset.cgi; returned runConfiguration to default true

Perl token changes as per meeting with Mike Daigle

Fully qualify spatial and replication properties

clean up replication and harvest properties

Add support for separate LDAP and organization level configurations, and add pisco test user accounts

add dev.runConfiguration value

Remove quotes surrounding eml property values

Differentiate between tomcat directory and deployment directory.

Add a test.metacat.url value for testing and qualify other test properties with a test. prefix.

Add default skin to available skins

Add db script suffix properties

include eml201_document_corrected=false property that was lost in merge