Metacat

Open links to the top-level orcid.org site in new tabs too

Add target="_blank" to ORCID links in the View Service for EML docs

Fixes https://projects.ecoinformatics.org/ecoinfo/issues/7220

Change mime type to text/plain

Change the mime type from application/xml to text/xml.

Increase eml-text.xsl's section header level to match with overall
document structure

More bug tweaks to eml-text.xsl

- Fix use of non-existent HTML5 tag 'emphasis' and use 'em' instead as
intended
- Add target=_default to links

Merge changes from 2.8 branch - added a display of "Role" to the eml-party.xsl stylesheet for Associated Parties

Relax the EML text XSLs rendering of ulinks

This makes all content inside a ulink show up inside the <a> tag in
the output. Before this change, if CDATA was present inside a ulink
element, it would be ignored because the XSL was only extracting the
citetitle's CDATA

Overhaul EML Text XSLT to support everything in the entire module

Major touchup work in ISO XSL

- Fixes numerous bugs involving ISO's bizarre use of nilReasons
- Fixes numerous bugs involving differences between the ISO workbook
and the schema
- Adds support for Polygons

Fix a bug in the eml party xslt

Change the mime type back to application/xml.

Change the mime type back to application/xml.

Change the mime type of those files.

Change the mime type.

Tidy up ISO stylesheets. This is an set of iterative tweaks both to the
in-file formatting as well as a bit of small tweaks to how things work.

Simplify keyword thesaurus display

Showing the whole thesaurus for every keyword set is way too much info
and is impossible to display with a naive implementation.

Fix bug in abstract handling in ISO XSLT

Before this change, a missing abstract would still show up but just as
an empty box with on content. This should be fixed now.

Move Additional Info in the EML stylesheet to after the keyword sets

Show the additionalInfo under Data Usage Rights to reflect the additional info collected in the Registry

Add support for alternateIdentifier system in EML stylesheet

Fix a bug in the conditional for the EML XSLT for alternateIdentifiers

Remove extra <table> HTML element that was causing rendering issues with the enumerated domain template

Fix a typo that was preventing dateTime attributes from rendering fully

If EML physical/size/@unit isn't specified, assume its bytes

Previously, if the unit attribute wasn't set on an EML physical size
element, the size showed up as just the number with no units. The EML
spec says that, if unit is omitted, bytes is the assumed unit.

- Clean up isoroot selectors and comments. Use relative xpaths when possible
- Clean up the output of the ex module
- Misc whitespace/formatting fixes

Clean up ISO stylesheet formatting

Start the basis for gmd:distributionInfo

Minor tweaks and code cleanup to ISO XSLT

- Renamed the folder once more to be more correct

Improve the EML XSLT's handling of ORCIDs as userIds

Add support in the EML XSLT for making ORCID userIds into links

Multiple changes to the ISO XSLT

- Renamed base folder from iso to iso19139
- Added a short_citation template for showing thesauri in tight places such as the keywords list
- Tweaked the geographic coverage output so the static maps render in Metacat UI

Continue work on ISO XSLTs

- We now have a template for CI_Citation
- I moved some templates into separate XSLTs
- Cleaned up overally structure/styling of translated output

Include the files that were totally supposed to go in the last commit

Continue work in ISO XSLT

- Tweak how extents are displayed
- Start adding support for GML Polygons
- Restructure EX module templates and clean them up a bit

Continue work on ISO XSLT

- Cleans up the root element to better match what we want in the end (looks like the EML XSLT)
- Switches a lot of calls to call-template over to apply-templates. I think this is a good idea because the ISO standards use XSD type equivalence to extend existing schemas. e.g., gmx:Anchors can show up when the gmd schema says only a gco:CharacterString should go there...

Improve output of ISO XSLT

Hook ISO XSLT into view service

Create first basic version of ISO 19115 XSL stylesheets

use "PLACEHOLDER" for annotation target rather than the actual attribute name value (for manual annotations added from spreadsheet).

Change the ldapweb.cgi script to use an additional property called email.contact which provides a contat email (particularly when email.sender is set to noreply@...). Update the skin configurations with this property, as well as the metacat.properties default.

Show the annotation target under the attribute name

Give the EML title HTML container a distinct class to hide it in MetacatUI (rather than using jQuery to hide it in MetacatUI. This is faster.)

add rendering for onlink to FGDC xslt. https://redmine.dataone.org/issues/7747

add first pass at DCX XSLT. https://redmine.dataone.org/issues/7686

Merge changes from the 2.6.0 release.

Merge minor registry changes from the 2.6 branch back to the trunk.

refs https://github.nceas.ucsb.edu/KNB/arctic-data/issues/107

Layout the study area descriptors a bit better in a table as opposed to a div. This also accommodates the name_or_id attribute (as the Code column), whereas the div didn't handle it. Needs som work on the citation column.

refs https://github.nceas.ucsb.edu/KNB/arctic-data/issues/42

Add project-level rendering into the eml-dataset XSLT. Convert the older table-based layout to use the Bootstrap 2.x classes for labels and divs.

refs https://github.nceas.ucsb.edu/KNB/arctic-data/issues/42

comment out (duplicate) EML download link since it does not apply in the CN context and the same functionality exists elsewhere in the MetacatUI rendering. https://redmine.dataone.org/issues/7639

comment out the party annotation-target - don't think we'll be using this anytime soon (had been for annotating with orcids)

rollback to use entity/attribute id for the tab-pane (so it will work) and include new div id for the annotatable attribute section.

restructure attribute and party sections so that the annotatable div does not have DOM children.

Update the packageId attribute in EML documents on update. Never display the local docid in the rendered EML.

Move the dataset metadata label for metacatui EML

Mark the entity metadata sections in metacatui EML transformations

Changed the FGDC MetacatUI theme translation so that it displays nicely in MetacatUI and works correctly

Add classes and attributes to the object name and online distribution link elements in the MetacatUI theme.

• Use the cite tag for the MetacatUI skin citation
• Take out extra divs in the MetacatUI skin that are not necessary
• Add a placeholder for the package contents table in the MetacatUI skin
• Classify more of the HTML tags with their content type so MetacatUI can find content more efficiently...

Display text nodes in EML when the value is directly in the text node or in a <section> tag or in a <para> tag (in metacatui skin)

include type="party" attribute for the divs that contain contact information (for annotating with ORCIDs)

In the EML XSLT - Add classes to the entity details containers so they can be identified easily

include resource="#xpointer(...)" attributes for sections that are potential targets for annotation. So far we have the various people (creator, contact, etc) and data table attributes. https://github.com/DataONEorg/sem-prov-design/issues/18

show the Organization input field now that we will use keywords for the working group.

Make UI include the Organization (called "site" in the form params) instead of the registry code. https://projects.ecoinformatics.org/ecoinfo/issues/6162

include optional email.overrideURL property for the account management page to send an email link that will result in a styled response. https://projects.ecoinformatics.org/ecoinfo/issues/6066

remove the NCEAS-specific admin db connection properties from the metadata config so they do not show up in the metacatui configuration.

redirect to the configured metacatui context (ui.context in metacat.properties file). this in conjunction with choosing "metacatui" as the default skin in the metacat admin interface will redirect requests to the metacat context (e.g., /knb) to the ui context (e.g., /metacatui). https://projects.ecoinformatics.org/ecoinfo/issues/6062

remove all metacatui references to external resources (from git or github). xsl now only returns html structure, no header/footer or css candy.

do not include metacatui headers and footers.

download arrow on right side

remove "Package" from the default button, only use it when we have an ORE map id.

give the div that holds the download package button an id attribute so that we can dynamically change the content in there if/when we know the ORE map id instead of the EML id. https://projects.ecoinformatics.org/ecoinfo/issues/5948

do not use #none for the accordian control in method section

when 'printall' we should show the attribute coverage and method information, not a link to it

when 'printall' we should show the enumeratedDomain of a measurement.

use 'printall' option for the EML display - metacatui will scroll and navigate through all the metadata and has tabified the entity/attribute info. https://projects.ecoinformatics.org/ecoinfo/issues/5948

use glyph download icon, not a /knb/style/images path to an image (ugh!)

handle <references> element in <creator> for the citation.

use #view/{pid} pattern for the citation link, and then /object/{pid} for the XML download -- so no old Metacat API calls show in the rendered EML.

remove all table/tr/td/ use. clean up the data distribution area.

include $pid parameter and views/package endpoints instead of metacat API urls. Note that some links still exist for rendering portions of the EML (additionalMetadata and attribute details).

use <article id="Metadata"/> for the rendered EML and FGDC sections to make client-side consumption easier/more generic.

first pass at FGDC reformatting for metacatui look and feel.

type the doctype="metadata" objects as "FGDC-STD-001-1998" formatId for rendering XSLT and for DataONE SystemMetadata.

copy fgdc xsl from common - start metacatui reformatting

remove unused resources from metacatui skin

use <p> for thesaurus above the table of keywords

use "controls" class on Web Address

render keywords + thesaurus in a table structure

use <strong> for title rendering.

remove more ":" after labels

remove all table/tr/ cruft that is not used in main layout.

reformat attribute enumerated domain.

use "UTF-8" instead of encoding="iso-8859-1"

use "controls" class for common name element value

do not use ":" after labels.

remove all table/tr/td use

clean up detail tables for measurement type/scale/codes sections

render attributeList with side-bar navigation tabs for each attribute.