/ - Diff - Metacat - Ecoinformatics Redmine

           <li> Metacat also allows document level access control via Access Control
           Lists (ACLs).</li>
         </ul>
       <p style="color: red; font-face: bold">WARNING: The rest of this page is
        out-of-date and no longer accurate. It is left only for reference purposes.
        ACL information is now set through EML 2.0.0 access control elements.
       </p>
       <!--<img src="acontrol.gif">-->
       <b>ACLs</b>
       <p>Metacat allows a user to set permissions for users or groups on individual

           <li> <a href="./metacat.html">Metacat Server</a></li>
           <li> <a href="./metacatdb.html">Metacat Database</a></li>
           <li> <a href="./metacatdom.html">Metacat Document Object Model (DOM)</a></li>
           <li> <a href="./clientapi.html">Metacat Client Programming Interface</a></li>
           <li> <a href="./metacatload.html">Writing XML</a></li>
           <li> <a href="./metacatquery.html">Searching the Database</a></li>
           <li> <a href="./metacatread.html">Reading data from Metacat</a></li>
           <li> <a href="./metacatgetlog.html">Event Log Reporting</a></li>
         </ul>
       </td>
     </tr>

            from the Database</p></td>
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           <td class="tablehead" colspan="2"><p class="label">The Metacat DOM</p></td>
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         <tr>
           <td class="tablehead" colspan="2"><p class="label">Document Loading</p></td>
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       on the storage of XML documents.</p>
       <br>
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     <!--
       * metacatread.html
+      *
       *      Authors: Jivka Bojilova
       *    Copyright: 2000 Regents of the University of California and the
       *               National Center for Ecological Analysis and Synthesis
       *  For Details: http://www.nceas.ucsb.edu/
       *      Created: 2000 April 5
       *      Version: 0.01
       *    File Info: '$Id$'
+      *
       * October Meeting SDSC, 2000
     -->
     <HTML>
     <HEAD>
     <TITLE>Metacat</TITLE>
     <link rel="stylesheet" type="text/css" href="@docrooturl@default.css">
     </HEAD>
     <BODY>
       <table width="100%">
         <tr>
           <td class="tablehead" colspan="2"><p class="label">Metacat
            getlog action</p></td>
            <td class="tablehead" colspan="2" align="right">
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       <p>
     	The Metacat servlet provides an 'action' for retrieving a log of the
             events that have occurred, including document insertions, updates,
             deletes, and reads.  This allows a simple reporting facility where
             event reports can be output in XML format.  The report can be subset to
             only include events from a particular IP address, user, event type,
             after a start date, or before an end date.
       </p>
       <p>
     	The basic log can be viewed using the <code>getlog</code> servlet
     	action, as in the following URL:<br>
          	<code>http://some.metacat.host/context/metacat?action=getlog</code>
       </p>
       <p>
       	This will return an XML formatted log of all events since the log was
     	initiated, which can be quite extensive.  To subset the report, provide
             parameters to restrict the set of matching events:
             <ul>
             <li>ipAddress -- restrict the report to this ipAddress (repeatable)</li>
             <li>principal -- restrict the report to this principal (repeatable)</li>
             <li>docid -- restrict the report to this docid (repeatable)</li>
             <li>event -- restrict the report to this event type (repeatable)
                 <ul>
                 <li><code>insert</code></li>
                 <li><code>update</code></li>
                 <li><code>delete</code></li>
                 <li><code>read</code></li>
                 </ul>
             </li>
             <li>start -- restrict the report to events after this date
                 <ul>
                 <li><code>YYYY-MM-DD+hh:mm:ss</code></li>
                 </ul>
             </li>
             <li>end -- restrict the report to events before this date
                 <ul>
                 <li><code>YYYY-MM-DD+hh:mm:ss</code></li>
                 </ul>
             </li>
             </ul>
       </p>
       <p>
     	Some example queries follow.  To view only the 'read' events, use a url like:<br>
          	<code>http://some.metacat.host/context/metacat?action=getlog&event=read</code>
       </p>
       <p>
     	To view only the events for a particular IP address, use a url like:<br>
          	<code>http://some.metacat.host/context/metacat?action=getlog&ipaddress=107.9.1.31</code>
       </p>
       <p>
     	To view only the events for a given user, use a url like:<br>
          	<code>http://some.metacat.host/context/metacat?action=getlog&principal=uid=johndoe,o=NCEAS,dc=ecoinformatics,dc=org</code>
       </p>
       <p>
     	To view only the events for a particular document, use a url like:<br>
          	<code>http://some.metacat.host/context/metacat?action=getlog&docid=knb.5.1</code>
       </p>
       <p>
     	To view only the events after a given date, use a url like:<br>
          	<code>http://some.metacat.host/context/metacat?action=getlog&start=2004-09-15+12:00:00</code>
       </p>
       <p>
     	To view only the events before a given date, use a url like:<br>
          	<code>http://some.metacat.host/context/metacat?action=getlog&end=2004-09-15+12:00:00</code>
       </p>
       <p>
     	Query parameters can be combined, so to view the 'insert' events for September 2004 use a url like:<br>
          	<code>http://some.metacat.host/context/metacat?action=getlog&event=insert&start=2004-09-01+12:00:00&end=2004-09-30+23:59:59</code>
       </p>
       <p>
     	The log is returned in XML format.  Here is an example log format:<br>
             <pre>
     &lt;?xml version="1.0"?&gt;
     &lt;log&gt;
     &lt;logEntry&gt;&lt;entryid&gt;44&lt;/entryid&gt;&lt;ipAddress&gt;34.237.20.142&lt;/ipAddress&gt;&lt;principal&gt;uid=jones,o=NCEAS,dc=ecoinformatics,dc=org&lt;/principal&gt;&lt;docid&gt;esa.2.1&lt;/docid&gt;&lt;event&gt;insert&lt;/event&gt;&lt;dateLogged&gt;2004-09-08 19:08:18.16&lt;/dateLogged&gt;&lt;/logEntry&gt;
     &lt;logEntry&gt;&lt;entryid&gt;47&lt;/entryid&gt;&lt;ipAddress&gt;34.237.20.142&lt;/ipAddress&gt;&lt;principal&gt;uid=jones,o=NCEAS,dc=ecoinformatics,dc=org&lt;/principal&gt;&lt;docid&gt;esa.3.1&lt;/docid&gt;&lt;event&gt;insert&lt;/event&gt;&lt;dateLogged&gt;2004-09-14 19:50:40.61&lt;/dateLogged&gt;&lt;/logEntry&gt;
     &lt;/log&gt;
             </pre>
       </p>
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         <tr>
           <td class="tablehead" colspan="2"><p class="label">XML Parsing with SAX</p></td>
           <td class="tablehead" colspan="2" align="right">
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-...
       </PRE>
       <br>
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     <!--
       * metacatread.html
+      *
       *      Authors: Jivka Bojilova
       *    Copyright: 2000 Regents of the University of California and the
       *               National Center for Ecological Analysis and Synthesis
       *  For Details: http://www.nceas.ucsb.edu/
       *      Created: 2000 April 5
       *      Version: 0.01
       *    File Info: '$Id$'
+      *
       * October Meeting SDSC, 2000
     -->
     <HTML>
     <HEAD>
     <TITLE>Metacat</TITLE>
     <link rel="stylesheet" type="text/css" href="@docrooturl@default.css">
     </HEAD>
     <BODY>
       <table width="100%">
         <tr>
           <td class="tablehead" colspan="2"><p class="label">Metacat Client
            Application Programming Interface</p></td>
            <td class="tablehead" colspan="2" align="right">
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       <p>Metacat provides a client programming interface for communicating with
          the server.  The client API is available in Java and Perl, but the
          Java interface will be described here. This interface allows a client
          application to easily authenticate users and perform basic metacat
          operations such as reading metadata and data files, inserting, updating,
          and deleting files, and searching for packages based on metadata matches.
       </p>
       <p>To use the client, developers must include the 'metacat-client.jar',
          'utilities.jar',  and 'httpclient.jar' in their classpath.  Then, the API
          methods can be used.  For example, a typical session to read a document
          from the database might look like this:<br>
          <pre>
             String metacatUrl = "http://foo.com/context/metacat";
             String username = "uid=jones,o=NCEAS,dc=ecoinformatics,dc=org";
             String password = "neverHarcodeAPasswordInCode";
             try {
                 Metacat m = MetacatFactory.createMetacatConnection(metacatUrl);
                 m.login(username, password);
                 Reader r = m.read("testdocument.1.1");
                 // Do whatever you want with Reader r
             } catch (MetacatAuthException mae) {
                 handleError("Authorization failed:\n" + mae.getMessage());
             } catch (MetacatInaccessibleException mie) {
                 handleError("Metacat Inaccessible:\n" + mie.getMessage());
             } catch (Exception e) {
                 handleError("General exception:\n" + e.getMessage());
+            }
          </pre>
       </p>
       <p>The Client API is defined by the interface
          <code>edu.ucsb.nceas.metacat.client.Metacat</code>, and all operations
          are fully defined inthe javadoc documentation.  Briefly, the API
          provides the following operations:</p>
         <ul>
         <li><code>public String <b>login</b>(String username, String password)
                throws MetacatAuthException, MetacatInaccessibleException;</code></li>
         <li><code>public String <b>logout</b>() throws MetacatInaccessibleException,
             MetacatException;</code></li>
         <li><code>public Reader <b>read</b>(String docid) throws InsufficientKarmaException,
             MetacatInaccessibleException, MetacatException;</code></li>
         <li><code>public Reader <b>readInlineData</b>(String inlinedataid)
             throws InsufficientKarmaException,
             MetacatInaccessibleException, MetacatException;</code></li>
         <li><code>public Reader <b>query</b>(Reader xmlQuery) throws MetacatInaccessibleException,
                                                     IOException;</code></li>
         <li><code>public String <b>insert</b>(String docid, Reader xmlDocument, Reader schema)
             throws InsufficientKarmaException, MetacatException, IOException,
             MetacatInaccessibleException;</code></li>
         <li><code>public String <b>update</b>(String docid, Reader xmlDocument, Reader schema)
             throws InsufficientKarmaException, MetacatException, IOException,
             MetacatInaccessibleException;</code></li>
         <li><code>public String <b>upload</b>(String docid, File file)
             throws InsufficientKarmaException, MetacatException, IOException,
             MetacatInaccessibleException;</code></li>
         <li><code>public String <b>upload</b>(String docid, String fileName,
                              InputStream fileData, int size)
             throws InsufficientKarmaException, MetacatException, IOException,
             MetacatInaccessibleException;</code></li>
         <li><code>public String <b>delete</b>(String docid)
             throws InsufficientKarmaException, MetacatException,
             MetacatInaccessibleException;</code></li>
         <li><code>public void <b>setMetacatUrl</b>(String metacatUrl);</code></li>
         <li><code>public String <b>getSessionId</b>();</code></li>
         <li><code>public void <b>setSessionId</b>(String sessionId);</code></li>
       </ul>
       <br>
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Revision 2310

Added by Matt Jones about 20 years ago