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From 08/23/2004 to 09/21/2004

09/22/2004

11:39 PM Revision 2321 (metacat): Fixed some typos in the README, and rearranged a little.
Matt Jones
11:26 PM Revision 2320 (metacat): Moved deletion of stylsheets from clean to fullclean target so that the
styles will be guaranteed to be in place in the released version even after
a clean build.
Matt Jones
11:13 PM Revision 2319 (metacat): Added classpath to javadoc call so that we avoid javadoc errors that
complain about not being able to find the servlet classes. Matt Jones
11:06 PM Revision 2318 (metacat): Added dependency check for eml so that the schemas and dtds are not
checked out of CVS if they already exist in the lib directory. This is
based on checking for the key schema or dtd f...
Matt Jones
10:49 PM Revision 2317 (metacat): Added dependency check to see if the httpclient.jar and utilities.jar are
already present in lib. If they are, building utilities is skipped. This
allows us to ship a distribution with just...
Matt Jones
08:18 PM Bug #162: need harvest/batch load for metacat
Yahoo! James Brunt

09/21/2004

04:11 PM Bug #1542: SQL Server support broken

Moving the target to version 1.5
Saurabh Garg
03:49 PM Bug #1658: tracking bug for 1.4.0 release
(1) is done for now -- its been reviewed and is reasonable accurate, but not
perfect. Needs another pass.
(2) is don...
Matt Jones
03:42 AM Bug #1658: tracking bug for 1.4.0 release
(3) is now complete -- indexing can be accomplished using the 'buildindex'
action by people in the 'adminsitrators' l...
Matt Jones
03:46 PM Bug #162: need harvest/batch load for metacat

Closing as testing with postgres has been completed and harvester works with
both postgres and oracle.
Saurabh Garg
03:45 PM Bug #305: create an ofa compliant oracle instance
Moving to 1.5 because I don't want to make such a significant change immediately
before the KNB workshop demos.
Matt Jones
03:38 PM Revision 2316 (metacat): Added sample eml 2.0.1 document for use in the tests.
Matt Jones
03:36 PM Revision 2315 (metacat): Modified buildIndex() to now include an '@' sign in the path for ATTRIBUTE
nodes. Removed a bunch of debugging information. Fixed the BuildIndexTest
so that it would work on any machine (rem...
Matt Jones
01:17 PM Revision 2314 (metacat): Added code that changes the node column size
sgarg
09:39 AM Bug #1297: Registry: Changes in the Basic Information

So, should we add middle name to the registry form?
Saurabh Garg
03:55 AM Bug #1297: Registry: Changes in the Basic Information
Given name should b repeated to accomodate multiple given names (a middle name
is simply a second given name).
Matt Jones
09:38 AM Bug #1390: add UCNRS to the ldapweb.cgi management lists

This bug is fixed and done.
Saurabh Garg
03:51 AM Bug #1390: add UCNRS to the ldapweb.cgi management lists
I think this is now complete, and will be released with 1.4.0. Sid, can you
verify this and close the bug if true? ...
Matt Jones
09:33 AM Bug #273: site deployment for metacat
Metacat has been deployed at the LTER Network Office (LNO). To the best of my
knowledge, it has not been deployed at...
Duane Costa
04:01 AM Bug #273: site deployment for metacat
Duane -- this is overlapping with the previous bug -- can you close with a
resolution or update the status on this, o...
Matt Jones
09:14 AM Bug #325: create site filters to convert site metadata to eml packages
A number of metadata conversion applications were implemented by David
Blankman, with the help of two graduate stude...
Duane Costa
03:53 AM Bug #325: create site filters to convert site metadata to eml packages
Duane -- could you deal with this by either closing it if it is eing tracked
elsewhere or updating it with a plan. Th...
Matt Jones
04:10 AM Bug #468: TLS between ldap server and metacat
We need to implement TLS as soon as possible, as its a real problem we're
passing so many passwords around in clearte...
Matt Jones
04:08 AM Bug #433: browse interface to metacat
I began this work, and now have some XSLT stylesheets that allow you to browse
via keyword, organizaiton, and creator...
Matt Jones
04:05 AM Bug #151: need doctype equivalence specification
This is being addressed within the context of SEEK SMS and will not be addressed
directly in Metacat. Marking WONTFIX.
Matt Jones
04:04 AM Bug #1310: Old ACLs are overwritten by registry
Need to fix this for the next release (1.5). Matt Jones
03:59 AM Bug #1372: Registry: Reconfigure entryForm.tmpl
Andrea is working on a new layout for this whole page, and removing all of the
hardcoded styles so that it fits into ...
Matt Jones
03:58 AM Bug #1344: Cancel button on delete screen leads to a blank screen
The cancel button on delete still leads to blank, but also after successful
delete the screen is blank. Retargeting ...
Matt Jones
03:49 AM Bug #101: generate data set usage metadata/ provide access log
The query/report functionality (1) is now complete. Use the 'getlog' servlet
action to get an XML report of the even...
Matt Jones
03:38 AM Revision 2313 (metacat): New README in preparation for the 1.4.0 release, and updated the properties
file with the new version number. Matt Jones
03:13 AM Revision 2312 (metacat): Added in servlet action 'buildindex' for building the XML_index table entries
for either a set of documents (if one or more docid params are provided) or
for the whole set of documents in the xml...
Matt Jones
03:01 AM Revision 2311 (metacat): Created a list of all of the servlet actions in the documentation and listed
all reuired and optional parameters for each action. These need to be
documented but at least the list is all in one...
Matt Jones
02:01 AM Revision 2310 (metacat): Added new sections to the Metacat documentation describing the Metacat
client API and the Metacat 'getlog' servlet action for event reporting. Matt Jones
12:31 AM Revision 2309 (metacat): Updated metacat documentation with additional properties and fixed the
description of several properties. We really need to clean out unused
properties and generally clean up the configur...
Matt Jones
10:46 PM Revision 2308 (metacat): Added a property listing servlet administrators.
Matt Jones

09/20/2004

04:25 PM Revision 2307 (metacat): Changed DBSAXHandler.run() to now use the new DocumentImpl.buildIndex() method
for populating the xml_index table. The new method uses a jdbc ResultSet
for populating the index rather than doing ...
Matt Jones
03:10 PM Revision 2306 (metacat): Updated the build index test.
Matt Jones
02:30 PM Revision 2305 (metacat): Compose the Metacat URL from the httpserver and the servletpath properties, replacing hard-coded references to servlet.
Duane Costa
02:28 PM Revision 2304 (metacat): Send redirect to HarvesterRegistration, instead of using the full class name which works on Tomcat-only installations but not with Apache.
Duane Costa
10:44 AM Bug #1047: Create triggers on LTER tables for ldap insert
David completed these triggers in January, 2004.
This issue is local to the LTER Network Office. It involves updatin...
Duane Costa
10:37 AM Bug #1046: LTER LDAP database coordination perl script changes
Closing bug for reasons explained above. Previous attempt to close didn't work. Duane Costa
10:33 AM Bug #1046: LTER LDAP database coordination perl script changes
Closing this bug. The ldapUpdate.pl Perl script was completed in January,
2004. It runs as a cron job, once every fi...
Duane Costa
09:49 AM Revision 2303 (metacat): Change the date format to one that is standard on both Oracle and Postgres.
Duane Costa

09/17/2004

04:56 PM Bug #1142: Key issues between java 1.3 and java 1.4

Closing this bug as Duane entered the requirements into metacatinstall.html
Saurabh Garg
03:00 PM Revision 2302 (metacat): Revisions to Metacat Installation Instructions page. Most of the edits in this revision involve the build.properties file. A new HTML table was created to describe the properties and their values.
Duane Costa
11:10 AM Bug #188: provide a metacat client library with a standard API

Closing the bug. New bugs added covering tasks which were not done yet.
Saurabh Garg
11:09 AM Bug #1693 (Closed): Metacat client library: Static Cookies
The HttpMessage code uses static cookies. This is bad and should be changed.
(From bug# 188)
Saurabh Garg
11:08 AM Bug #1692 (Resolved): Metacat client library: handle binary data and return strings for simpler interface
Most of the APIs return Readers. In some cases we may also want InputStream
in order to deal with binary data (incl...
Saurabh Garg
11:01 AM Bug #1691 (Closed): Metacat client library: use direct method calles for efficiency
The current client uses HTTP. There may be clients that exist on the same
server for which we would want to use som...
Saurabh Garg
08:48 AM Revision 2301 (metacat): Whitespace changes that fix a few formatting problems after Jing's commit.
Matt Jones
08:42 AM Revision 2300 (metacat): Replace relative path to harvester registration login servlet with context path generated through ant build
Duane Costa
08:39 AM Revision 2299 (metacat): Add properties and filters for harvester registration servlets
Duane Costa
05:04 PM Revision 2298 (metacat): Add new feature that delete can be broadcasted by force replication.
Jing Tao

09/16/2004

04:40 PM Revision 2297 (metacat): The new buildIndex() function now can write allof the appropriate index paths to the database for any given document. Next need to create a function to rebuild on demand, and modify DBSAXHandler.run() to use the new buildIndex() function.
Matt Jones
04:16 PM Revision 2296 (metacat): corrected wrong variable names in build file.
sgarg
04:05 PM Revision 2295 (metacat): Added harvester servlets to the web.xml files.
sgarg
01:32 PM Revision 2294 (metacat): Added test class for buildIndex() routine. Not completed yet.
Matt Jones
12:08 PM Revision 2293 (metacat): Added changes to buildIndex() function. Now it is finding the right set of
paths, just have to save these in a hash and then add them to the DB xml_index
table.
Matt Jones
11:15 AM Revision 2292 (metacat): changed function parameters in accordance with changes in PermissionController
sgarg
11:13 AM Revision 2291 (metacat): Modified inline data permission handling, so that access rules for old version of inline data can be checked correctly.
sgarg
11:09 AM Revision 2290 (metacat): Added a function which returns inline data id with out the revision number.
sgarg
11:04 AM Revision 2289 (metacat): Changed error text that is returned when an invalid eml is inserted.
sgarg
11:01 AM Revision 2288 (metacat): Added another test to check if access is checked when an old version of inline data is read using action=readinlinedata
sgarg
09:15 AM Revision 2287 (metacat): Changed the ESA nad LTSS skins to display all data from the KNB at the request of
OJ Reichman. Matt Jones
08:25 PM Revision 2286 (metacat): Add a code to load eml201 parser to fix the bug that couldn't generate access rule for eml201 doc.
Jing Tao
08:24 PM Revision 2285 (metacat): Add a note that you should put full name as state name to generate a key. Otherwise, the trustkey will be not recongized.
Jing Tao

09/15/2004

04:25 PM Revision 2284 (metacat): Fixed some more bugs.
sgarg
04:09 PM Revision 2283 (metacat): Added sql for counting packages.
Matt Jones
02:47 PM Revision 2282 (metacat): fixed error in input param
sgarg
02:17 PM Revision 2281 (metacat): Added code to send showWgList, showSiteList, showOrganization, lsite and usite for one tmpl to other.
sgarg
02:00 PM Revision 2280 (metacat): Fixed a bug in creation of EML documents when coordinates from the site_list have to be used.
sgarg
01:02 PM Revision 2279 (metacat): Added lines for updating xml_catalog in the upgrade script to point to the
new schema locations. Matt Jones
11:02 AM Revision 2278 (metacat): Fixed error in handling of multiple additional metadata tags...
sgarg
08:57 AM Revision 2277 (metacat): Updated build.xml to use new sql scripts.
Matt Jones
08:56 AM Revision 2276 (metacat): New schema changes, including upgrade scripts. Includes renamed postgres
scripts. Matt Jones

09/14/2004

03:58 PM Bug #1658: tracking bug for 1.4.0 release

4) and 6) done.
Checked that 5) is done.
Working on 2.
Saurabh Garg
03:57 PM Revision 2275 (metacat): Test added to insert eml 2.0.0 document and update it with eml 2.0.1 document.
sgarg
03:39 PM Revision 2274 (metacat): Updates to the config for the esa skin, and added an LTSS skin.
Matt Jones
03:24 PM Revision 2273 (metacat): removed errors being generated in handling of qformat when action=insert. If qformat is not specified, xml is assumed as default.
sgarg
03:20 PM Bug #1295: Registry: Button texts are ambiguous and need to be changed.

Changing 'Submit Entry' to 'Submit Dataset'
Leaving Reset as it.
Saurabh Garg
03:20 PM Revision 2272 (metacat): Changing 'Submit Entry' to 'Submit Dataset'
sgarg
03:14 PM Bug #1671: editing registry entry deletes keywords

Fixed.
The bug came into picture, when no keyword type is suggested for a particular
keyword. This resulted in igno...
Saurabh Garg
03:14 PM Revision 2271 (metacat): Fixed a bug in handling of associated parties.
sgarg
02:56 PM Revision 2270 (metacat): Fixed the bug described in 1671. The bug came into picture, when no keyword type is suggested for a particular keyword. This resulted in ignoring of that row of data.
sgarg

09/13/2004

04:34 PM Bug #1142: Key issues between java 1.3 and java 1.4
Lets reword that to say that j2sdk 1.4.2 or later is required. I think the
install instructions is the right place. ...
Matt Jones
04:29 PM Bug #1142: Key issues between java 1.3 and java 1.4

For running metacat, now Java version 1.4 would be required. Hence this problem
should not occur.
But couldnt fin...
Saurabh Garg
02:22 PM Bug #1680: New functions in Metacat Client API

Renaming as enhancement
Saurabh Garg
02:14 PM Bug #1680: New functions in Metacat Client API

Added following functions to the MetacatClient
-> readInlineData
-> upload() - with file name
-> upload...
Saurabh Garg
02:13 PM Bug #1680 (Resolved): New functions in Metacat Client API
.. for read inline data and uploading data needed. Saurabh Garg
02:21 PM Bug #1682: Error in handling of docid formats

Fixed
Saurabh Garg
02:21 PM Bug #1682 (Resolved): Error in handling of docid formats
Errors generated when insert, update and delete actions tried with docid
formats such as a.c.t.t.c.a.1.1
Saurabh Garg
02:15 PM Bug #1681: Access not checked while file uploading

Fixed
Saurabh Garg
02:14 PM Bug #1681 (Resolved): Access not checked while file uploading
When user with id X uploads data as act.1.1, another user with id Y can upload
act.1.2 without requiring access for...
Saurabh Garg
02:10 PM Bug #1679: Random string entry in action=insert leads to hanging of code

Fixed
Saurabh Garg
02:10 PM Bug #1679 (Resolved): Random string entry in action=insert leads to hanging of code
Input of following type, hangs metacat code
http://metacat_url?action=insert&docid=act.1.1&doctext=random_strin...
Saurabh Garg

09/10/2004

04:42 PM Revision 2269 (metacat): Beginning new method for building the xml_index table. This uses the
JDBC resultset directly rather than DBSaxNode, and recurses through the
records of the table. The new function 'buil...
Matt Jones
03:12 PM Bug #1674 (Resolved): Access control for eml-2.1.0 documents
This bug is continuing from bug# 968 and is dependent on bug # 1132
Access control to handle eml version 2.0.1 has...
Saurabh Garg
02:57 PM Bug #968: Access control for eml2 documents

I am closing this bug as access control for eml version 2.0.1 is implemented
now. A new bug will be opened for eml ...
Saurabh Garg
02:42 PM Bug #968: Access control for eml2 documents

Changing target_milestone to 1.5 as this bug covers eml-2.1.0 also.
Saurabh Garg

09/09/2004

03:51 PM Revision 2268 (metacat): removed a bug which was pointed out by Bing and fixed by Jing.
sgarg
03:48 PM Revision 2267 (metacat): Removed some unused code
sgarg

09/08/2004

12:12 PM Revision 2266 (metacat): Revisions to text for the ESA / LTSS registry.
Matt Jones

09/03/2004

03:58 PM Bug #1671 (Resolved): editing registry entry deletes keywords
When a registry entry has keywords and the entry is edited through the web site,
the keywords are not propogated to ...
Matt Jones

09/02/2004

02:43 PM Revision 2265 (metacat): Added a new method to check upload function when a data stream is passed.
sgarg
02:38 PM Revision 2264 (metacat): Added new upload function which takes InputStream as input.
sgarg
05:49 PM Revision 2263 (metacat): Adding InlineDataAccessTest.java which has tests regarding inline data access. Also updated AccessControlTest.java
sgarg

09/01/2004

02:43 PM Revision 2262 (metacat): fixed some bugs in document update
sgarg
05:52 PM Revision 2261 (metacat): Added method to metacat client for reading inline data - readInlineData()
sgarg

08/31/2004

03:47 PM Revision 2260 (metacat): Made changes in AccessControl and Online Data Access tests.
sgarg
03:45 PM Revision 2259 (metacat): Fixed a bug in upload function. For online data updates, access was not checked.
sgarg

08/28/2004

03:25 AM Revision 2258 (metacat): Modifications to the registry to support the new ESA skin. Factored out some of
the configuration-specific code into properties that are set in the various
cfg files in the skins. New properties i...
Matt Jones

08/27/2004

08:51 AM Revision 2257 (metacat): Changed properties to use the xml_index table by default.
Matt Jones
05:30 PM Revision 2256 (metacat): Adding new file with tests regarding access controls related to online data... the tests which are failing are commented out for the time being .. once the bugs are fixed in metacat, they will removed.
sgarg

08/26/2004

02:56 PM Revision 2255 (metacat): Add additional comments to the test cases.
Duane Costa
01:45 PM Revision 2254 (metacat): Remove obsolete comment.
Fix broken URL in HarvestSiteScheduleTest.java Duane Costa

08/24/2004

03:35 PM Revision 2253 (metacat): Fixed handling of various docid formats.
sgarg
12:34 PM Revision 2252 (metacat): Code added to handle errors resulting from following urls:
http://metacat.nceas.ucsb.edu/knb/metacat?action2 - no action specified
http://metacat.nceas.ucsb.edu/knb/metacat?ac...
sgarg
11:14 AM Revision 2251 (metacat): Added check for null condition so that proper error text is returned to user.
sgarg

08/23/2004

02:21 PM Revision 2250 (metacat): Checked to be sure the instance has been initialized in the getDBCOnnection
static method call. Assuming it has been initialized could (and does)
lead to NullPointerExceptions when used outsid...
Matt Jones
 

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