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First Community Workshop » History » Version 24

Corinna Gries, 01/16/2014 02:19 PM

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h1. First Community Workshop
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h2. Goals
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* Develop ideas for larger synthesis across systems
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* Introduce scientists to the concept of workflow systems
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* Introduce scientists to open data and methods sharing
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* Gather requirements for collaboration tools that would allow scientists to use them and share data and workflows.
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h2. Participants
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Ilkay Altintas, UC San Diego, altintas at sdsc.edu
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Carl Boettiger, UC Davis, cboettig at gmail.com
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Erica Christensen, Utah State, erica.christensen at weecology.org
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Elsa Cleland, UCSD, ecleland at ucsd.edu
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Scott Collins, U New Mexico, scollins at sevilleta.unm.edu
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Sam Fey, Dartmouth, Samuel.B.Fey.GR at dartmouth.edu
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Corinna Gries, U Wisconsin, cgries at wisc.edu
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Lauren Hallett, Berkeley, lauren.m.hallett at gmail.com
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Stan Harpole, Iowa State, harpole at iastate.edu
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Dave Harris, UC Davis, harry491 at gmail.com
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Matt Jones, UC Santa Barbara, jones at nceas.ucsb.edu
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Sydney Jones, U New Mexico, syd at sevilleta.unm.edu
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Julie Ripplinger, Arizona State University, julie.ripplinger at asu.edu
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Andrew Rypel, WDNR, andrew.rypel at wisconsin.gov
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David Seekell, UVa, das9xx at virginia.edu
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Elizabeth Siddon, U. Alaska Fairbanks, ecsiddon at alaska.edu
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Eric Sokol, Virginia Tech, sokole at vt.edu
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Lizzie Wolkovitch, UCSD/Harvard, lizzie at biodiversity.ubc.ca, wolkovich at fas.harvard.edu
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h2. Agenda
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|_\3<. Wednesday February 5, 2014|
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| 8:30 am -  9:00 am | Welcome and introductions | Corinna |
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| 9:00 am -  9:20 am | Project overview | Corinna, Scott, Matt |
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| 9:20 am - 10:00 am | Intro to community metrics| Scott|
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|10:00 am - 10:30 am |\2.Coffee Break|
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|10:30 am - 11:00 am | Automating community metrics, data and workflow repositories and workflows | Matt |
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|11:00 am - 12:00 pm | Hands-on Kepler exercise 'making workflows portable' | Matt |
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|12:00 pm -  1:00 pm | Lunch | on your own |
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| 1:00 pm -  2:00 pm | Round-the-room brainstorm community metrics | Scott |
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| 2:00 pm -  2:30 pm | Prioritize community metrics | Scott |
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| 2:30 pm -  3:00 pm | form working groups | plenary |
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| 3:00 pm -  3:30 pm |\2.Afternoon Break |
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| 3:30 pm -  5:30 pm | Community metrics implementation hackathons (R) | working groups |
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|\3=. |
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|_\3<.Thursday February 6, 2014|
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| 8:30 am - 10:00 am | Community metrics implementation hackathons (R) | working groups |
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|10:00 am - 10:30 am |\2.Coffee Break|
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|10:30 am - 12:00 pm | Community metrics implementation hackathons (Kepler) | working groups |
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|12:00 pm -  1:00 pm | Lunch | on your own |
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| 1:00 pm -  2:00 pm | Discussion hackathon outcomes | plenary |
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| 2:00 pm -  3:00 pm | Executing and sharing community metrics workflows | working groups |
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| 3:00 pm -  3:30 pm |\2.Afternoon Break |
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| 3:30 pm -  4:30 pm | Desiderata for sharing community metrics | working groups |
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| 4:30 pm -  5:30 pm | Next steps - requirements for sharing workflows | plenary |
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|\3=. |
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|_\3<.Friday February 7, 2014|
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| 8:30 am - 10:00 am | Next steps - prioritized list of datasets, analyses, data operations, visualizations | plenary |
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|10:00 am - 10:30 am |\2.Coffee Break|
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|10:30 am - 12:00 pm | Next steps - research questions to be answered with diverse data and identified community metrics  | plenary |
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|12:00 pm |\2. Adjourn |
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h2. Outcome
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* Repository design requirements for sharing workflows
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* list of community metrics
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* list of data sets
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* list of data transformation operations to get from raw data to analyses
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* list of visualizations
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* research collaborations: Ideas for ecological questions that can be answered with these data and metrics