Activity
From 10/31/2005 to 11/29/2005
11/29/2005
- 02:46 PM Revision 2786 (metacat): Fixed a bug in the way taxon rank and taxon value were assigned.
- 02:45 PM Revision 2785 (metacat): Changing the links in the esa header.
- 08:49 AM Bug #2207: Advanced Search integration
- On 11/22/2005, Duane Costa wrote
Hi Matt,
I've checked in all my code to enhance the default skin with Advanced Sea...
11/28/2005
- 04:50 PM Revision 2784 (metacat): Some small bug fixes...
- 02:47 PM Revision 2783 (metacat): New functions in the dataset registry to support moderation feature needed for ESA
- 02:38 PM Revision 2782 (metacat): Fixed the bug in the link to view documents pending moderation. The links works now.
- 01:11 PM Revision 2781 (metacat): add a token to specify the login form template
- 01:09 PM Revision 2780 (metacat): Changing the table name back to xml_index
- 01:04 PM Revision 2779 (metacat): a new variable for the moderation email template and change in value of some other variables
11/23/2005
- 01:32 PM Revision 2778 (metacat): Fixes to enable SOAP support for the LSID resolver. Axis now is
- installed as a component of the authority context and the services list
is properly displayed. Added the happyaxis.j... - 12:03 PM Revision 2777 (metacat): Minor change to diagnostic output.
11/22/2005
- 05:44 PM Revision 2776 (metacat): Fixed a log bug.
- 03:09 PM Revision 2775 (metacat): New templates for ESA skin.
- loginForm.tmpl is useful in displaying a login form
and esaModNotification is useful in sending notifications to the ... - 02:53 PM Revision 2774 (metacat): Add a client-side check: if user does not enter any search values, prompt the user with a dialog box to confirm that the user wishes to go ahead with a search for all documents. This is equivalent to the behavior in the simple search box.
- Added a hidden input field for siteValue with a value of "ALLSITES". This is a substitute for the siteValue drop-down...
- 02:45 PM Revision 2773 (metacat): Modify the bean's get() methods that return String values to trim white space off the string prior to returning it. This is so that input fields that contain only white space will not be treated as valid search values.
- 10:28 AM Revision 2772 (metacat): Updated names of jar files in build.xml for LSID support.
11/21/2005
- 06:09 PM Revision 2771 (metacat): Added axis servlet defs in web.xml
- 05:42 PM Revision 2770 (metacat): New libraries for axis 1.3.
11/18/2005
- 05:10 PM Revision 2769 (metacat): New SQL tables and db upgrade scripts that define a new table stucture for identifiers and delete the previously unused accession_number table. This is in anticipation of supporting LSID identifiers. Currently these tables are unused by the servlet but are in place for discussion.
- 04:44 PM Revision 2768 (metacat): Cleaned up AccessionNumber class to get rid of unused methods. It seems the entire accession_number table is no longer used but has not been deleted from the build. Will do in subsequent commit.
- 01:25 PM Revision 2767 (metacat): 1. Modified buildIndex() so that only one connection is used for both indexing nodes and indexing paths.
- 2. Modified the indexing algo so that indexing of paths is done while nodes are being indexed. Results in a much fast...
- 01:24 PM Revision 2766 (metacat): Change the code level of the MetacatHasDoc harvester operation from "Warning" to "Info". This is to reduce the amount of diagnostic output generated in the email reports to the site contact.
- 01:18 PM Revision 2765 (metacat): Change the maximum code level reported to the site contact from "info" to "notice". This is to reduce the amount of diagnostic output generated in the email reports to the site contact. Diagnositcs of type "error", "warning", and "notice" will be sent to the site contact, while messages of type "info" and "debug" will not (but they will still be sent to the Harvester Administrator).
- 01:17 PM Revision 2764 (metacat): Modified the way checkDocumentTable is accessed. Also removed the while loop from the checkDocumentTable. Now if the document is not found, the thread goes to sleep - instead of checking again. (In hope of a more bugfree code)
- 01:11 PM Revision 2763 (metacat): Replaced access to NodeRecord.<variable> with NodeRecord.<getVariable>
- 01:10 PM Revision 2762 (metacat): 1. Changed teh access modifier from public to private for variables
- 2. Added a new variable for nodedatanumerical
3. added a new constructor - 01:08 PM Revision 2761 (metacat): Moved printMessage statements to inside the if loop so that they are not printed each time getInstance is called
11/17/2005
- 03:21 PM Revision 2760 (metacat): Bug #2207. Metacat Advanced Search interface.
- Improvements to Advanced Search form:
(1) Delete keywordSearch() function. Not used in advanced search form.
(2) Re-i... - 01:27 PM Revision 2759 (metacat): Using xml_path_index instead of xml_index to find documents which havnt been indexed.
- 12:37 PM Revision 2758 (metacat): Replaced hardcoded namespaces with variable defined in metacat.properties
- 12:35 PM Revision 2757 (metacat): Replaced hardcoded link with ant token
- 12:32 PM Revision 2756 (metacat): Modified links for the Accept, Delete and Review buttons
- 12:30 PM Revision 2755 (metacat): Replaced hyperion.nceas.ucsb.edu with @mailhost@
- 12:29 PM Revision 2754 (metacat): a new variable for the namepsaces to be indexed
- 11:38 AM Revision 2753 (metacat): Changed logMetacat to be a local variable in MetaCatServlet to avoid any potential threading issues.
11/16/2005
- 05:27 PM Revision 2752 (metacat): Metacat has had problems with threading issues when accessed from ecogrid. These problems may stem from the use of shared global variables within the servlet that are not protected against threading problems. We used a lot of these, which I am eliminating in this commit. Besides final variables used as constants (which are not a problem), now there are only three unprotected variables (sessionHash, logMetacat, and conn) which are harder to eliminate. I will be discussiong this with Sid tomorrow to see how to eliminate them.
- 01:07 PM Revision 2751 (metacat): Fixed the bug that replicate data file failed that the documents records wouldn't be deleted.
- 01:07 PM Revision 2750 (metacat): the parameter of method getRevisionTableReList is docidWithoutRev.
- 12:38 PM Revision 2749 (metacat): Fixed bug that data file upload failed, record couldn't be deleted.
- 10:43 AM Revision 2748 (metacat): Bug #2207. Add new build target, advancedsearchjar. This allows the Advanced Search engine to be built as a library for use in other web applications. This is important because LTER is currently using a separate web application for its interface to the Metacat data catalog, so the library allows the search engine to be used both inside and outside Metacat. Eventually LTER would like to fully re-integrate its Metacat interface with the lter skin, so eventually the need for this build target may go away.
- 10:37 AM Revision 2747 (metacat): Bug #2207. Enable hyperlink to the Advanced Search form.
- 10:35 AM Revision 2746 (metacat): Bug #2207. New JSPs added to the default skin to support Metacat Advanced Search interface.
- 10:34 AM Revision 2745 (metacat): Bug #2207. Add new CSS class to set the correct iframe sizes for the Advanced Search box.
- 10:32 AM Revision 2744 (metacat): Bug #2207. Add two new JavaScript variables to support Metacat Advanced Search interface.
- 10:31 AM Revision 2743 (metacat): Bug #2207. Add new JavaScript function to support Metacat Advanced Search interface.
- 10:22 AM Revision 2742 (metacat): Bug #2207. Add AdvancedSearchServlet to support Metacat Advanced Search interface.
- 09:57 AM Revision 2741 (metacat): Bug #2207: Implementation of the Metacat Advanced Search engine.
11/15/2005
11/12/2005
11/11/2005
- 12:15 PM Revision 2738 (metacat): Removed extra package declaration in LSID java file.
- 12:09 PM Revision 2737 (metacat): Initial checkin of LSID support code for metacat. The LSID support here
- provides access to metacat documents through an LSID identifier. The
identifier takes the form:
urn:lsid:ecoinform... - 10:12 AM Revision 2736 (metacat): Add new index value for distribution url.
- 10:03 AM Revision 2735 (metacat): Added parameter to specify how long the indexing Thread should wait for the docid to show up in xml_documents
- 10:01 AM Revision 2734 (metacat): Changes in calls made to IndexingQueue class
- 10:00 AM Revision 2733 (metacat): A version with less number of bugs.
11/10/2005
- 02:13 PM Revision 2732 (metacat): New code for run an indexing queue and indexing thread which runs every 24 hours
- 01:40 PM Revision 2731 (metacat): Removed the call to indexing function in DBSAXHandler and added a call to indexing function IndexingQueue
- 01:38 PM Revision 2730 (metacat): removed the indexing code from DBSAXHandler
- 01:34 PM Revision 2729 (metacat): 1. Added code to start the indexing thread.
- 2. Fixed a bug in the query on xml_nodes and xml_index
3. Added more debug statements
4. Fixed a bug in code which de... - 01:22 PM Revision 2728 (metacat): New function which returns the formatted left join query. This is required as Oracle and postgres have different left join syntax
- 01:19 PM Revision 2727 (metacat): new variables defined for the indexing threads.
11/09/2005
11/08/2005
- 06:53 PM Revision 2725 (metacat): Add more debug info.
- 02:14 PM Revision 2724 (metacat): Using join query for more efficiency.
- 02:03 PM Revision 2723 (metacat): Add class as parent class add method.
- 02:02 PM Revision 2722 (metacat): Add method as parent class adding method.
- 02:02 PM Revision 2721 (metacat): Add method as parent class adding a method.
- 02:01 PM Revision 2720 (metacat): Add a method to get doc list query.
- 10:21 AM Revision 2719 (metacat): Fixed bug to get docid list.
- 09:49 AM Revision 2718 (metacat): Add new command to create no-password key.
11/02/2005
- 03:52 PM Revision 2717 (metacat): Add more info transfer.
- 11:07 AM Revision 2716 (metacat): Modified the WARNing message
- 10:31 AM Revision 2715 (metacat): Fix for bug in the previous commit
- 10:16 AM Revision 2714 (metacat): Modified the debug levels of debug statements
11/01/2005
- 05:01 PM Revision 2713 (metacat): Add code to handle replication document in xml_document table.
- 02:19 PM Revision 2712 (metacat): Modification in algo:
- 1. Find if the root element has prefix (e.g. <eml:eml>). If found, go to step
2, otheriwse go to step 3.
2. Look ... - 02:09 PM Revision 2711 (metacat): Bugfix for 2091. Removed the function needValidation(). Added function getPrefix which returns the prefix. And use the following steps to find out the namespace
- 1. Find if the root element has prefix (e.g. <eml:eml>). If found, go to step
2, otheriwse go to step 3.
2. Look for... - 11:38 AM Bug #2091: Don't determine document namespace by "schemaLocation" attribute
Changing the target and severity of the bug as this bug is allowing people to
insert invalid eml documents which in...- 11:31 AM Revision 2710 (metacat): Faster script for upgrading oracle database
- 11:09 AM Revision 2709 (metacat): Updated list of coordinates for OBFS sites
- (Commit for Veronique Connolly by Saurabh Garg)
- 10:57 AM Revision 2708 (metacat): Bugfix in the searches done from the skin webpages...
- 10:35 AM Revision 2707 (metacat): Updated list of coordinates for UCNRS sites
- (Commit for Veronique Connolly by Saurabh Garg)
- 09:38 AM Revision 2706 (metacat): Change in obfs homepage so that search uses a radio button instead of check box
- 09:35 AM Revision 2705 (metacat): Change in nrs homepage so that search uses a radio button instead of check box
- 09:14 AM Revision 2704 (metacat): Change in nceas homepage so that search uses a radio button instead of check box
10/31/2005
- 05:24 PM Revision 2703 (metacat): Add code to handle catalog is null when inserting xml_revisions table.
- 04:19 PM Revision 2702 (metacat): Add code to handle write record into xml_documents when catalog id is null.
- 12:56 PM Revision 2701 (metacat): Bugfix to the code which sets parentnodeid in xml_path_index. (Use setInt instead of setFloat)
- 11:40 AM Revision 2700 (metacat): Added some documentation and did a little cleanup.
- 09:26 AM Revision 2699 (metacat): Continued work -- now the user can get info on all layers servered by the wms, including the metacat docs.
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