Activity

From 04/24/2010 to 05/23/2010

05:04 PM Bug #4769: Save annotations to network: I found an issue where network annotations made by other people were not being loaded. Fixed that.
But i'd like to fi... ben leinfelder

09:33 AM Bug #4769: Save annotations to network: This morning (from morpho installed on a different computer) I was able to view, edit and save the annotation for htt... Margaret O'Brien

08:19 PM Bug #4769: Save annotations to network: I successfully saved and reopened these 2 datasets and their annotations:
http://fred.msi.ucsb.edu:8080/knb/metacat/... Margaret O'Brien
02:51 PM Bug #4769: Save annotations to network: I've set up a test Metacat instance for us to use with the semtools-Morpho installers:
http://fred.msi.ucsb.edu:8080/... ben leinfelder
02:58 PM Bug #4770: Load Annotations from Metacat in Annotation plugin: Remote (Metacat-stored) annotations are now being loaded in the local (Morpho) AnnotationManager when the EML package... ben leinfelder

04:06 PM Bug #4771: Decide permission policy for Annotations and Ontologies in Metacat: I'm pretty sure I can just pull the access xml from the EML and then call the setAccess() method with that xml fragme... ben leinfelder
03:05 PM Bug #4769: Save annotations to network: A potential problem I see cropping up is when we have local and network copies of annotations and the IDs differ (eit... ben leinfelder
12:27 PM Bug #4769: Save annotations to network: Now saving to the same location that the EML data package is using:
LOCAL, METACAT, or BOTH.
If the EML has current ... ben leinfelder
12:09 PM Bug #4769: Save annotations to network: Resolved a few outstanding issues:
-ID conflict resolution: revision is automatically incremented until conflict does... ben leinfelder

04:16 PM Bug #5000: oboe-core: comment all classes and properties: Added comments to all classes and properties. These should be reviewed and possibly revised prior to publishing. Shawn Bowers

10:44 AM Bug #5004 (New): oboe: create an oboe-examples ontology for documenting "best practices": Should be comprised of a set of examples from the oboe "getting started" guide. These examples should also encode "be... Shawn Bowers
10:41 AM Bug #5003 (New): oboe: develop a high-level "getting started" guide / documentation: This should also include a set of simple examples and a corresponding ontology oboe-examples simply for the sake of t... Shawn Bowers
10:38 AM Bug #5002 (New): oboe-unit: create new oboe-unit for oboe-core: Modify the current oboe-unit to conform to the new oboe-core structure. Primarily requires modifying the characterist... Shawn Bowers
09:12 AM Bug #5001 (New): oboe-core: ensure new characteristic structure still supports unit conversion: This needs to be done using some examples ... maybe a "unit-test" ontology (not sure what this would be)? Shawn Bowers
09:08 AM Bug #5000 (Resolved): oboe-core: comment all classes and properties: Provide comments for each class and property definition. Many of these can be taken from oboe.owl. Shawn Bowers

02:02 PM Bug #4675: EML:DataTable:Annotation cardinality: This notion of multiple annotations per data table came up again recently (due to a bug, actually).
I'm wondering if... ben leinfelder

02:15 PM Bug #4856: Ontology Browser as a non-modal palette: there's now a blue border around the "active" field that will disappear when a different field is selected or if the ... ben leinfelder
11:59 AM Bug #4856: Ontology Browser as a non-modal palette: I've noticed it's quite easy to "forget" which field is driving the onotology palette - perhaps I'll had some clear v... ben leinfelder
11:55 AM Bug #4853: Save as Duplicate... should copy the Annotation too: Now responding to the "save duplicate event". You will be prompted as to whether or not you want to copy the annotati... ben leinfelder

04:13 PM Bug #4946: Look-ahead search freezes: with the new[er] ontology palette, the look ahead searching might become less important. It's nearly impossible to ge... ben leinfelder
04:09 PM Bug #4922: DB-driven Annotation Manager: the bulk of this is complete - i'll add individual tasks to refine its use as they are identified. ben leinfelder
04:05 PM Bug #4844: Dynamically resize Ontology selection fields: the fields now have helping prompts underneath them. and the tool tip is great.
Dynamically resizing the fields was u... ben leinfelder
04:03 PM Bug #4769: Save annotations to network: now responding to the save event (on a data package) and saving to the same location as the eml package.
The "Save An... ben leinfelder
11:34 AM Bug #4856: Ontology Browser as a non-modal palette: Now the palette remains open. When a different field is clicked, the contents change to match (filter class and selec... ben leinfelder
08:10 AM Bug #4856: Ontology Browser as a non-modal palette: from shawn:
-do not close/reopen palette, just refresh the contents
-include search field in palette window
-include ... ben leinfelder
08:36 AM Bug #4950: Toggle "edit mode" on Annotation tabs: much better as a checkbox ben leinfelder
08:26 AM Bug #4950: Toggle "edit mode" on Annotation tabs: change to checkbox ben leinfelder

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