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From 02/03/2010 to 03/04/2010

03/04/2010

05:02 PM Bug #4871 (Resolved): Need a new tag for utilities module on Metacat 1.9.2 release
I just fixed bug 4866. http://bugzilla.ecoinformatics.org/show_bug.cgi?id=4866
This fix involves the change on Dat...
Jing Tao
04:56 PM Bug #4866: The date displaying on Workflow Run Schedule is incorrect
This is a tricky bug.
The problem is on the DateUtil class of the utilities module. When scheduler transforms a Time...
Jing Tao

03/03/2010

05:44 PM Bug #4850: Get the new TPC scheduler working with the new changes in Kepler from the KarXmlGenerator
I just scheduled a tpc-09 workflow. It works. So the bug can be closed. Jing Tao
03:54 PM Bug #4837: Permission error when ESA moderator attempts to modify a document
added the group information to the return xml for the metacat api getloggedinuserinfo call. Use that information to ... Michael Daigle
03:33 PM Bug #4866 (Resolved): The date displaying on Workflow Run Schedule is incorrect
I tried to schedule a workflow run on the scheduler interface. The start time is 03/03/2010 15:30:00 and end time is ... Jing Tao

03/02/2010

02:11 PM Bug #4862 (Closed): NCEAS registry form now creates access rules for extra parties
In the past, EML documents created using the NCEAS registry form were written with the following automatic access rul... Jim Regetz
12:20 PM Bug #4850: Get the new TPC scheduler working with the new changes in Kepler from the KarXmlGenerator
After changing the query format and result set style sheet, the tpc workflow and workflowRun search works. The every ... Jing Tao

03/01/2010

04:15 PM Bug #4839: Fix URL in "revision notification" email sent to ESA moderators
Removed the urls in moderator and user emails and instead put in a link to the server and instructions how to view th... Michael Daigle
04:14 PM Bug #4835: ESA review comments don't appear to users when viewing their documents
The setaccess api in metacat was not correctly parsing the access rules, so permissions for the revision document wer... Michael Daigle

02/26/2010

03:41 PM Bug #4691: Registry mixes up users when saving
(In reply to comment #1)
> All data entered into the 'data set owner' fields should be copied to a
> //creator elemen...
Jim Regetz
02:39 PM Bug #4691: Registry mixes up users when saving
Definitely fix in 1.9.2 Michael Daigle
03:14 PM Bug #4850: Get the new TPC scheduler working with the new changes in Kepler from the KarXmlGenerator
adding kepler bug dependency ben leinfelder
02:59 PM Bug #4850: Get the new TPC scheduler working with the new changes in Kepler from the KarXmlGenerator
I'm in the process of adding tpcStatus in the KarEntryAttributes such that it should look like this:
<karEntryAttrib...
ben leinfelder
10:36 AM Bug #4850 (Resolved): Get the new TPC scheduler working with the new changes in Kepler from the KarXmlGenerator
On kepler side, the metadata format to describe the workflow kar file and workflow run files was changed. So TPC sche... Jing Tao
03:05 PM Bug #4841: Review page for new data registration omits spatial/temporal info
fix in 1.9.2 Michael Daigle
03:04 PM Bug #4838: Permissions error for link contained in Data Set Citation section
fix in 1.9.2 Michael Daigle
03:00 PM Bug #4837: Permission error when ESA moderator attempts to modify a document
Fix in 1.9.2.
All rules in the doc should apply.
Michael Daigle
11:24 AM Bug #4837: Permission error when ESA moderator attempts to modify a document
FYI, this is more than just a esa-moderators permission issue. Here is another case:
Currently on esa-dev, document ...
Jim Regetz
02:48 PM Bug #4835: ESA review comments don't appear to users when viewing their documents
Fix in 1.9.2 Michael Daigle
02:44 PM Bug #4834: Request to modify document redirects to registry home after login
try to fix in 1.9.2 Michael Daigle
02:35 PM Bug #4130: data tables in KNB display dataTable->physical->objectName
Try to get this into the 1.9.2 release if possible. Michael Daigle

02/25/2010

03:04 PM Bug #4130: data tables in KNB display dataTable->physical->objectName
Yes, this should be changed. The current behavior is especially problematic for data packages that separately describ... Jim Regetz
02:12 PM Bug #4691: Registry mixes up users when saving
Further details: Other than the first and last name fields, none of the fields from the section "PRINCIPAL DATA SET ... Shaun Walbridge

02/24/2010

04:55 PM Revision 5244 (metacat): Fix two issues: Remove State from 'Data Set Contact' section of confirmation form (part of #3922), and make sure when editing a document that email addresses are picked up appropriately (capitalization).
Jing Tao
04:53 PM Bug #4843 (New): ESA registry: Remove 'station' default value from Organization Name
In the ESA registration form, the Organization Name field under Basic Information is prepopulated with the value 'sta... Jim Regetz
04:46 PM Bug #4842 (Resolved): ESA moderators should receive email notification of document revisions
A notification should be sent to the ESA moderators list (but probably not to the document owner? no point...) whenev... Jim Regetz
04:46 PM Bug #3922: Registry inserts "Select state or territory here." as default value
Looks like this was handled. No longer an issue. Michael Daigle
03:57 PM Bug #4841 (Resolved): Review page for new data registration omits spatial/temporal info
Both for the ESA and NCEAS data registries, information entered in the temporal coverage and spatial coverage section... Jim Regetz
03:50 PM Bug #4840 (New): When registering, U.S. State/Territory of owner is also applied to contact
When registering a new data set, dropdown menus for "U.S. State or Territory" appear both in the Principal Data Set O... Jim Regetz
02:33 PM Bug #4839 (Resolved): Fix URL in "revision notification" email sent to ESA moderators
The "revise document" notification that gets sent to ESA moderators after requesting a revision contains a URL like t... Jim Regetz
02:24 PM Bug #4838 (Resolved): Permissions error for link contained in Data Set Citation section
It's easiest to describe this by documenting the steps to reproduce. This involves ESA, but I haven't checked whether... Jim Regetz
02:11 PM Bug #4837 (Resolved): Permission error when ESA moderator attempts to modify a document
The "Revise document" notification emailed to moderators currently contains a URL that looks something like this:
...
Jim Regetz
01:48 PM Bug #4835 (Resolved): ESA review comments don't appear to users when viewing their documents
After the moderator enters review comments and sends a document back for revision, those comments are visible to the ... Jim Regetz
01:39 PM Bug #4834 (Resolved): Request to modify document redirects to registry home after login
The "Revise document" notification emailed to document submitters currently contains a URL that looks something like ... Jim Regetz

02/23/2010

03:44 PM Bug #4818: ESA does not send an email to moderators when new document is added via registry
resolved Michael Daigle
03:43 PM Bug #4818: ESA does not send an email to moderators when new document is added via registry
Added code to send email to both moderator and user when a document is added/modified via the esa registry. Michael Daigle

02/22/2010

09:50 AM Bug #4818 (Resolved): ESA does not send an email to moderators when new document is added via registry
The register-dataset.cgi does not send an email when a new document is created via the ESA skin. It used to, and sti... Michael Daigle
09:47 AM Bug #4787: User having WRITE permission couldn't update a document
There was a white space issue when comparing database access rules to doc access rules. Trimmed the values before co... Michael Daigle

02/11/2010

08:48 AM Revision 5224 (metacat): Modified ResourceHandler to change the GET url from /objects to /object to
match the DataONE method name. Matt Jones

02/10/2010

05:28 PM Bug #4787: User having WRITE permission couldn't update a document
This might be a regression due to recent access control handling changes. From my fuzzy memory, I seem to remember t... Matt Jones
05:16 PM Bug #4787 (Resolved): User having WRITE permission couldn't update a document
I think i reproduced the bug Jim mentioned:
A user having WRITE permission couldn't update a document.
Here are...
Jing Tao

02/09/2010

02:06 PM Bug #3368: security issue with skins
Correction, we are using <skin-name>.properties files which is also protected in web.xml.
Removing all .cfg files ...
Michael Daigle
01:25 PM Bug #3368: security issue with skins
We changed the configuration files to be <skin-name>.cfg and restricted access to all cfg files via web.xml Michael Daigle
01:56 PM Revision 5214 (metacat): Update the filename reference
walbridge
01:48 PM Bug #1530: cfg is readable by everyone
duplicate Michael Daigle
01:06 PM Bug #1530: cfg is readable by everyone
we added the following to knb web.xml to restrict access to .cfg files
<security-constraint>
<web-resource-collecti...
Michael Daigle
01:46 PM Bug #3378: Test turnkey installation against Tomcat 6
Duplicate Michael Daigle
01:22 PM Bug #3378: Test turnkey installation against Tomcat 6
Fully unit tested against Tomcat 6 Michael Daigle
01:29 PM Bug #3777: Move Tomcat libraries into metacat build
This is not practical. The server should reference the libraries of the native install. Michael Daigle
01:21 PM Bug #1674: Access control for eml-2.1.0 documents
This was implemented in Metacat 1.9.1 Michael Daigle
01:19 PM Bug #4558: Create validate and isAuthorized unit tests
These are handled in the workflow scheduler tests. Michael Daigle
01:18 PM Bug #3415: metacat prints namespace attributes in opposite order of original document
Metacat now returns the original document as it was submitted. Michael Daigle
01:07 PM Bug #4658: metacat runs out of memory
This seems to be resolved with the bug fix that uses a stringbuffer to read files as opposed to a string Michael Daigle
12:55 PM Bug #2994: Create a properties file for use by JUnit Tests
Put the test properties in metacat.properties. Added a properties file in build that specifies the deploy directory. Michael Daigle
12:51 PM Bug #4707: Update release 1.9.2 release notes
These cases are handled in the workflow scheduler tests. Michael Daigle
10:18 AM Bug #4716: Metacat should run against Tomcat 6
Built Metacat using Tomcat 5 servlet-api, deployed in Tomcat 6 and ran full unit tests successfully. Michael Daigle

02/03/2010

06:58 PM Revision 5211 (metacat): Merging in REST interface implementation that was created by Serhan Akin. Main change is
a refactored MetaCatServlet.java class, in which all of the handle* methods were moved
into a separate MetacatHandler...
Matt Jones
05:03 PM Revision 5210 (metacat): Adding missing brackets in else clause. Need to verify with Daigle that this is what he meant.
Matt Jones
02:35 PM Bug #4708: Handle writing a text node > 4000 characters to the db.
Moved the chunking to the DocumentImpl.writeChildNodeToDB() method Michael Daigle
01:29 PM Revision 5208 (metacat): Move the chunking of large test element data to centralized location in DBSAXNode.writeChildNodeToDB(). Beff up logging
daigle
01:16 PM Revision 5207 (metacat): Beef up log messages
daigle
01:14 PM Revision 5206 (metacat): add delay in insertSpatialDocs test to avoid buildIndex conflict
daigle
01:11 PM Revision 5205 (metacat): Add debug log statements
daigle
 

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