Metacat

03/23/2010

01:28 PM Bug #4900: LDAP referral connection timeout

added code to skip the referral and continue to the next one if there was a problem with the first referral. This all... ben leinfelder

11:22 AM Bug #4900: LDAP referral connection timeout

matt's suggestions
2) modify metacat to gracefully deal with referral failures and timeouts
3) modify metacat to quer... ben leinfelder

11:12 AM Bug #4900: LDAP referral connection timeout

This came to light when Judith and Victoria were trying to authenticate with the saeonocean metacat node (that points... ben leinfelder

11:09 AM Bug #4900 (Resolved): LDAP referral connection timeout

When trying to authenticate with a SANParks username from Metacat hosts that point to ldap.ecoinformatics.org, the au... ben leinfelder

03/19/2010

09:16 AM Bug #4691: Registry mixes up users when saving

Fixed the reference to the contact Fax number that was showing up in the creator section. Michael Daigle

09:15 AM Bug #4838: Permissions error for link contained in Data Set Citation section

I changed the link results to display in the top window. This displays a straight read action for the document, whic... Michael Daigle

03/18/2010

11:33 AM Bug #4892 (New): ESA registry shouldn't allow accepted docs to be modified

As submitter of an ESA document, I was able to modify the doc *after* it was accepted by the moderator, which I belie... Jim Regetz

11:20 AM Bug #4838: Permissions error for link contained in Data Set Citation section

Yep, the permissions problem is fixed. However, now when clicking the link, the frame that contains the doc is replac... Jim Regetz

10:09 AM Bug #4691: Registry mixes up users when saving

As tested on esa-dev: The FAX number provided in the contact section is still going into both the creator and contact... Jim Regetz

03/17/2010

03:29 PM Bug #4130: data tables in KNB display dataTable->physical->objectName

Changed the xsl to only use the entityName Michael Daigle

01:33 PM Bug #4886 (New): "DatabaseService is already registered" error after configuring Metacat

I installed Metacat from 1.9.2 branch and configured it successfully. Then I typed
the url on the browser:
http://c... Jing Tao

03/16/2010

01:40 PM Bug #4130: data tables in KNB display dataTable->physical->objectName

(In reply to comment #4)
> In my opinion, entityName is a lot lett predictable than objectName. In
> morpho, the use... Jim Regetz

03/12/2010

01:23 PM Bug #4130: data tables in KNB display dataTable->physical->objectName

Jim,
I think you should talk this over with Mark -- he was the one who made the strong case for using objectName, an... Matt Jones

12:32 PM Bug #4130: data tables in KNB display dataTable->physical->objectName

It turns out showing both names looks a little odd when they are identical (which is usually the case), and potential... Jim Regetz

03/11/2010

01:15 PM Bug #4834: Request to modify document redirects to registry home after login

After system installation and configuration, the admin user remains logged in. This seems to confuse the registry co... Michael Daigle

03/10/2010

02:55 PM Bug #4841: Review page for new data registration omits spatial/temporal info

The confirmData.tmpl script was looking at module.temporal and module.spatial properties from esa.properties. These ... Michael Daigle

01:14 PM Bug #4691: Registry mixes up users when saving

Added a separate method in register-dataset.cgi to create a creator section in the document that is different from th... Michael Daigle

03/09/2010

09:28 AM Bug #4871: Need a new tag for utilities module on Metacat 1.9.2 release

Created UTILITIES_1_0_1 tag and updated metacat build.xml to use this tag. Michael Daigle

03/08/2010

03:31 PM Bug #4838: Permissions error for link contained in Data Set Citation section

Added the session Id to the read url and it works. Michael Daigle

03/04/2010

05:02 PM Bug #4871 (Resolved): Need a new tag for utilities module on Metacat 1.9.2 release

I just fixed bug 4866. http://bugzilla.ecoinformatics.org/show_bug.cgi?id=4866
This fix involves the change on Dat... Jing Tao

04:56 PM Bug #4866: The date displaying on Workflow Run Schedule is incorrect

This is a tricky bug.
The problem is on the DateUtil class of the utilities module. When scheduler transforms a Time... Jing Tao

03/03/2010

05:44 PM Bug #4850: Get the new TPC scheduler working with the new changes in Kepler from the KarXmlGenerator

I just scheduled a tpc-09 workflow. It works. So the bug can be closed. Jing Tao

03:54 PM Bug #4837: Permission error when ESA moderator attempts to modify a document

added the group information to the return xml for the metacat api getloggedinuserinfo call. Use that information to ... Michael Daigle

03:33 PM Bug #4866 (Resolved): The date displaying on Workflow Run Schedule is incorrect

I tried to schedule a workflow run on the scheduler interface. The start time is 03/03/2010 15:30:00 and end time is ... Jing Tao

03/02/2010

02:11 PM Bug #4862 (Closed): NCEAS registry form now creates access rules for extra parties

In the past, EML documents created using the NCEAS registry form were written with the following automatic access rul... Jim Regetz

12:20 PM Bug #4850: Get the new TPC scheduler working with the new changes in Kepler from the KarXmlGenerator

After changing the query format and result set style sheet, the tpc workflow and workflowRun search works. The every ... Jing Tao

03/01/2010

04:15 PM Bug #4839: Fix URL in "revision notification" email sent to ESA moderators

Removed the urls in moderator and user emails and instead put in a link to the server and instructions how to view th... Michael Daigle

04:14 PM Bug #4835: ESA review comments don't appear to users when viewing their documents

The setaccess api in metacat was not correctly parsing the access rules, so permissions for the revision document wer... Michael Daigle

02/26/2010

03:41 PM Bug #4691: Registry mixes up users when saving

(In reply to comment #1)
> All data entered into the 'data set owner' fields should be copied to a
> //creator elemen... Jim Regetz

02:39 PM Bug #4691: Registry mixes up users when saving

Definitely fix in 1.9.2 Michael Daigle

03:14 PM Bug #4850: Get the new TPC scheduler working with the new changes in Kepler from the KarXmlGenerator

adding kepler bug dependency ben leinfelder

02:59 PM Bug #4850: Get the new TPC scheduler working with the new changes in Kepler from the KarXmlGenerator

I'm in the process of adding tpcStatus in the KarEntryAttributes such that it should look like this:
<karEntryAttrib... ben leinfelder

10:36 AM Bug #4850 (Resolved): Get the new TPC scheduler working with the new changes in Kepler from the KarXmlGenerator

On kepler side, the metadata format to describe the workflow kar file and workflow run files was changed. So TPC sche... Jing Tao

03:05 PM Bug #4841: Review page for new data registration omits spatial/temporal info

fix in 1.9.2 Michael Daigle

03:04 PM Bug #4838: Permissions error for link contained in Data Set Citation section

fix in 1.9.2 Michael Daigle

03:00 PM Bug #4837: Permission error when ESA moderator attempts to modify a document

Fix in 1.9.2.
All rules in the doc should apply. Michael Daigle

11:24 AM Bug #4837: Permission error when ESA moderator attempts to modify a document

FYI, this is more than just a esa-moderators permission issue. Here is another case:
Currently on esa-dev, document ... Jim Regetz

02:48 PM Bug #4835: ESA review comments don't appear to users when viewing their documents

Fix in 1.9.2 Michael Daigle

02:44 PM Bug #4834: Request to modify document redirects to registry home after login

try to fix in 1.9.2 Michael Daigle

02:35 PM Bug #4130: data tables in KNB display dataTable->physical->objectName

Try to get this into the 1.9.2 release if possible. Michael Daigle

02/25/2010

03:04 PM Bug #4130: data tables in KNB display dataTable->physical->objectName

Yes, this should be changed. The current behavior is especially problematic for data packages that separately describ... Jim Regetz

02:12 PM Bug #4691: Registry mixes up users when saving

Further details: Other than the first and last name fields, none of the fields from the section "PRINCIPAL DATA SET ... Shaun Walbridge

02/24/2010

04:53 PM Bug #4843 (New): ESA registry: Remove 'station' default value from Organization Name

In the ESA registration form, the Organization Name field under Basic Information is prepopulated with the value 'sta... Jim Regetz

04:46 PM Bug #4842 (Resolved): ESA moderators should receive email notification of document revisions

A notification should be sent to the ESA moderators list (but probably not to the document owner? no point...) whenev... Jim Regetz

04:46 PM Bug #3922: Registry inserts "Select state or territory here." as default value

Looks like this was handled. No longer an issue. Michael Daigle

03:57 PM Bug #4841 (Resolved): Review page for new data registration omits spatial/temporal info

Both for the ESA and NCEAS data registries, information entered in the temporal coverage and spatial coverage section... Jim Regetz

03:50 PM Bug #4840 (New): When registering, U.S. State/Territory of owner is also applied to contact

When registering a new data set, dropdown menus for "U.S. State or Territory" appear both in the Principal Data Set O... Jim Regetz

02:33 PM Bug #4839 (Resolved): Fix URL in "revision notification" email sent to ESA moderators

The "revise document" notification that gets sent to ESA moderators after requesting a revision contains a URL like t... Jim Regetz

02:24 PM Bug #4838 (Resolved): Permissions error for link contained in Data Set Citation section

It's easiest to describe this by documenting the steps to reproduce. This involves ESA, but I haven't checked whether... Jim Regetz

02:11 PM Bug #4837 (Resolved): Permission error when ESA moderator attempts to modify a document

The "Revise document" notification emailed to moderators currently contains a URL that looks something like this:
... Jim Regetz

01:48 PM Bug #4835 (Resolved): ESA review comments don't appear to users when viewing their documents

After the moderator enters review comments and sends a document back for revision, those comments are visible to the ... Jim Regetz

01:39 PM Bug #4834 (Resolved): Request to modify document redirects to registry home after login

The "Revise document" notification emailed to document submitters currently contains a URL that looks something like ... Jim Regetz

02/23/2010

03:44 PM Bug #4818: ESA does not send an email to moderators when new document is added via registry

resolved Michael Daigle

03:43 PM Bug #4818: ESA does not send an email to moderators when new document is added via registry

Added code to send email to both moderator and user when a document is added/modified via the esa registry. Michael Daigle

02/22/2010

09:50 AM Bug #4818 (Resolved): ESA does not send an email to moderators when new document is added via registry

The register-dataset.cgi does not send an email when a new document is created via the ESA skin. It used to, and sti... Michael Daigle

09:47 AM Bug #4787: User having WRITE permission couldn't update a document

There was a white space issue when comparing database access rules to doc access rules. Trimmed the values before co... Michael Daigle