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From 10/30/2011 to 11/28/2011

11/28/2011

04:53 PM Bug #5553: setaccess action may have deleting access rule functionality
When this bug is fixed, we should reopen the bug 5551:
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=5551
Jing Tao
04:53 PM Bug #5551: Set public access button on the FGDC document display page doesn't work (on sanparks skin).
Now we had temporary solution for set/revoke public readable access:
user can grant public access to a document, then...
Jing Tao
02:36 PM Bug #5551: Set public access button on the FGDC document display page doesn't work (on sanparks skin).
For the issue on comment 4, I found the clientViewBean object wasn't set sesssion id in ClientViewHelper.java. After ... Jing Tao

11/23/2011

02:55 PM Bug #5553 (New): setaccess action may have deleting access rule functionality
Currently, setaccess action can only add access rules to the metacat. There is a limitation.
Sometimes, we want to...
Jing Tao
02:48 PM Bug #5551: Set public access button on the FGDC document display page doesn't work (on sanparks skin).
Also i noticed after set the access, the delete, update and set access button disappeared. Only download button can b... Jing Tao
02:36 PM Bug #5551: Set public access button on the FGDC document display page doesn't work (on sanparks skin).
Since "setaccess" action can add access rules, this will cause problem.
Since the documents' allow rules for public r...
Jing Tao
02:23 PM Bug #5551: Set public access button on the FGDC document display page doesn't work (on sanparks skin).
To a none-public readable document, if we click the set access button with the checked public read check box, the doc... Jing Tao
01:59 PM Bug #5551: Set public access button on the FGDC document display page doesn't work (on sanparks skin).
The kepler_kepler_21 is a FGDC document with the public readable access rule. Here is the record on xml_access:
keple...
Jing Tao
11:09 AM Bug #5551 (Resolved): Set public access button on the FGDC document display page doesn't work (on sanparks skin).
When I tried to grant a public readable access to a nonpublic readable document, i got an error:
User public does n...
Jing Tao
01:07 PM Bug #5537: Move replication control panel to /admin servlet
There is now a separate /admin screen for replication configuration. Now /replication can require SSL client certific... ben leinfelder
11:00 AM Bug #5530: Sanparks skin shows update and delete action when user public reads a FGDC package
Ben:
Okay. This is the current behavior. I am going to close the bug.
Jing Tao
10:44 AM Bug #5530: Sanparks skin shows update and delete action when user public reads a FGDC package
I think the checkbox should reflect the current state of the document. If it is unchecked, that indicates that it is ... ben leinfelder

11/22/2011

05:10 PM Bug #5530: Sanparks skin shows update and delete action when user public reads a FGDC package
If fgdc-root.xsl, it has the control to display the buttons or not. The control is the parameter "enableFGDCediting".... Jing Tao

11/21/2011

02:22 PM Bug #5548 (New): Replace COS Mime multipart library
Here is a comment from Matt in bug 5543:
The COS Mime multipart library is incredibly old, and we should
seriousl...
Jing Tao
02:20 PM Bug #5543: Can't upload a FGDC metadata file with a data file in SANParks skin
Ben committed a new version of cos.jar file and modified the MetacatClient.java to handle the file size being -1. In ... Jing Tao
11:33 AM Bug #5543: Can't upload a FGDC metadata file with a data file in SANParks skin
We may not even have to require a known size -- Metacat isn't storing that information. Sure, the new DataONE apis us... ben leinfelder
10:17 AM Bug #5547 (New): Couldn't get the Register Data Form after login under Register Data tab on Sanparks skin
When you click "Register Data" tab on Sanparks skin, it will show a login form if you haven't login. However, it will... Jing Tao

11/18/2011

07:51 PM Bug #5543: Can't upload a FGDC metadata file with a data file in SANParks skin
Jing --
I'm not sure what the right solution is here, but here are some thoughts. First, trying to get the length o...
Matt Jones
05:58 PM Bug #5543: Can't upload a FGDC metadata file with a data file in SANParks skin
After dug around the code, i figured out the problem is at the CoientViewHelper.java.
In handlePackageUpload method,...
Jing Tao

11/17/2011

04:04 PM Bug #4728: grant document management privileges to admin user
Admin user[s] now have complete control of the Metacata data and metadata. The list of items here (1-6) are covered n... ben leinfelder
02:40 PM Bug #5544 (Resolved): the footer of the output page after clicking TPC status/workflow can't be read on Sanparks skin
The text of the footer of the output page is black and can be read when a user click TPC workflow/status menu. Jing Tao
02:31 PM Bug #5542: Data Package Upload form in SANParks skin missing the description text
In footer, set some text to be regwhitetext. So everything looks fine. Jing Tao
02:30 PM Bug #5542: Data Package Upload form in SANParks skin missing the description text
The text was not missing, but its color was white and couldn't be read.
The regtext class in sanparks.css was set:
....
Jing Tao
12:03 PM Bug #5533: Sanpark skin main page has login issue
For the first issue that a user could not log in on IE, the reason is IE invalid the login form after a div, which co... Jing Tao

11/16/2011

02:55 PM Bug #5543 (Resolved): Can't upload a FGDC metadata file with a data file in SANParks skin
I tried to use the data package upload form to upload a FGDC file, it succeeded. However, if i uploaded a FGDC file w... Jing Tao
02:45 PM Bug #5542 (Resolved): Data Package Upload form in SANParks skin missing the description text
It misses the text like:
Enter the Meta Data File (*.xml)
Enter Data File 1 (*.shp)
Enter Data File 2 (*.dbf)
....
Jing Tao

11/15/2011

01:30 AM Bug #5513: add support for DOI identifiers from EZID
I created a new library called 'ezid' in its own project that can be used to access the EZID REST services from withi... Matt Jones

11/11/2011

09:10 AM Bug #5537 (Resolved): Move replication control panel to /admin servlet
Instead of using the SSL client certificate secured /replication servlet to administer replication settings via the w... ben leinfelder
09:00 AM Bug #5531: Remove/make optional the DataONE MN registration that occurs during Metacat configuration
There is now a separate admin configuration screen for dataone:
-you can bypass it in the same way you can bypass geo...
ben leinfelder

11/09/2011

03:19 PM Bug #5353: EcogridWriter doesn't work with the metacat built from trunk.
Both Jing and I were unable to replicate this bug testing against a more recent Metacat trunk build ben leinfelder
02:56 PM Bug #5353: EcogridWriter doesn't work with the metacat built from trunk.
I tried this out with Kepler 2.1, writing sample EML 2.0.0 and EML 2.1.0 metadata (and data files). All worked out fi... ben leinfelder
12:14 PM Bug #5353: EcogridWriter doesn't work with the metacat built from trunk.
Is there a sample Kepler workflow we can use to debug this? ben leinfelder
02:28 PM Bug #3815: Ampersand character not correctly encoded
I just tried the registry on a test machine running most recent Metacat trunk and the ampersand was correctly encoded... ben leinfelder
12:47 PM Bug #5536: Restore replicated data files that are 0 bytes
Matt suggests an alternative approach: delete the files and the DB records for those files so that the next timed rep... ben leinfelder
12:23 PM Bug #5536 (Resolved): Restore replicated data files that are 0 bytes
Due to a replication bug, some data files were not replicated fully. These should be tracked down and restored. ben leinfelder
12:44 PM Bug #4405: PISCO, KNB and LTER have different query result for SBC datasets.
Running the query against the PISCO server returned the expected 14 records. ben leinfelder
12:33 PM Bug #5532: Use strict build tag strategy for 2.0.0 release
Looks good to me. Matt Jones
12:31 PM Bug #5532: Use strict build tag strategy for 2.0.0 release
Proposed tags. Please comment.
-eml schema 2.1.1 (tags/RELEASE_EML_2_1_1)
-eml style sheets (tags/RELEASE_EML_UTILS_1...
ben leinfelder
12:22 PM Bug #5519: Replicated data files are 0 bytes
This is fixed. We just need to figure out the files that have not replicated successfully. Any 0-length files on KNB ... ben leinfelder
12:20 PM Bug #3811: Spatial caches should be backed up and restored
The final step in the process should be to _NOT_ regenerate the spatial cache during 2.0 configuration. ben leinfelder
12:13 PM Bug #5288: Metacat got "java.lang.OutOfMemoryError: PermGen space" after new geoserver update
added to word doc ben leinfelder
12:03 PM Bug #5513: add support for DOI identifiers from EZID
I've managed to get UCSB to agree to pay for an EZID account from CDL that we'll be able to use to programatically as... Matt Jones
10:31 AM Bug #5535 (New): The 611 CDR documents replicated to KNB need to be repaired by fixing their inline data.
This bug is the section 4 of the ongoing concerns:
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=3296
During...
Jing Tao
09:59 AM Bug #5534 (Resolved): Replication log somehow doesn't work.
Metacat logged the some important replication information into the metacatreplication.log file which stays in the dir... Jing Tao
09:41 AM Bug #3296: Replication: Many EML documents fail to replicate
Follow-up to the previous comment of 2008-06-05:
1. There are still 94 documents that fail to replicate. These are a...
Duane Costa

11/08/2011

08:19 AM Bug #5533: Sanpark skin main page has login issue
An additional message from judith:
Jing
I notice that when you login through the web page on firefox You get the me...
Jing Tao

11/07/2011

05:43 PM Bug #4356: knb website query result shows old version of a document
Ben and I tested the updating and query on both forced replication and timed replication between two metacats. We cou... Jing Tao
04:07 PM Bug #4356: knb website query result shows old version of a document
I used a morpho to create a eml document and insert it to metacat. Then i did a search and records was added to xml_q... Jing Tao

11/04/2011

04:33 PM Bug #5533 (Resolved): Sanpark skin main page has login issue
Hi Jing
Yes I see that it works on firefox the problem is that all our staff have to use IE So is there a way to f...
Jing Tao
03:18 PM Bug #5532 (Resolved): Use strict build tag strategy for 2.0.0 release
Currently Metacat relies on a number of external projects and repositories. We should take this opportunity to finali... ben leinfelder
10:26 AM Bug #5531 (Resolved): Remove/make optional the DataONE MN registration that occurs during Metacat configuration
Right now when I [re]configure Metacat I hit the DataONE CN in an attempt to register myself as a MN. This should be ... ben leinfelder

11/01/2011

02:10 PM Bug #5499: citation format odd for metacat data sets
added to EML project and updated the Metacat build to pull from that tagged style update. ben leinfelder
01:57 PM Bug #5499: citation format odd for metacat data sets
Close. All that needs to change is delete #3 -- if BOTH are provided, only list the individualName and omit the orga... Matt Jones
12:43 PM Bug #5499: citation format odd for metacat data sets
After looking more closely at the code, I think we already have what you propose -- it just depends on the content of... ben leinfelder

10/31/2011

05:21 PM Bug #2495: Charset bug: Internationalization
Moving this to 2.0.0.
Also, I think relying on the XML-declared encoding is a much safer (easier) bet than inspectin...
ben leinfelder
05:13 PM Bug #5519: Replicated data files are 0 bytes
After installing Metacat 1.9.5 on fred.msi.ucsb.edu I was able to see the failure point. It was something that I fixe... ben leinfelder
02:18 PM Bug #5519: Replicated data files are 0 bytes
There's no difference between 1.9.5 tag and trunk for the ReplicationService.handleGetDataFileRequest() method -- may... ben leinfelder
02:06 PM Bug #5519: Replicated data files are 0 bytes
Now with BOTH servers using Apache certificate/SSL mechanisms the replication is still successful.
bespin.nceas.ucsb....
ben leinfelder
01:25 PM Bug #5519: Replicated data files are 0 bytes
Switching bespin.nceas.ucsb.edu to use Apache for the SSL handling still left the data replication working as expecte... ben leinfelder
12:34 PM Bug #5519: Replicated data files are 0 bytes
I set up one-way replication from bespin.nceas.ucsb.edu --> fred.msi.ucsb.edu.
Using the Tomcat-only certificate gene...
ben leinfelder
02:27 PM Bug #5530: Sanparks skin shows update and delete action when user public reads a FGDC package
also see: http://bugzilla.ecoinformatics.org/show_bug.cgi?id=5394 ben leinfelder
02:21 PM Bug #5530 (Resolved): Sanparks skin shows update and delete action when user public reads a FGDC package
Here is an email from Judith:
Hi Jing
I have successfully uploaded a number of GIS layers What concerns me is
th...
Jing Tao
02:27 PM Bug #5394: FGDC interface does not correctly show controls and permission settings
consolidating into one bug ben leinfelder
08:40 AM Bug #5499: citation format odd for metacat data sets
No, I don't think that's quite right. If a Creator contains an individualName, use that and not the organization. If ... Matt Jones
 

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