Activity
From 04/15/2012 to 05/14/2012
05/14/2012
- 05:17 PM Bug #5608: Enable all FK constraints in Metacat production [copies]
- The server_location = -2 docs are a mismash:
docid | rev
------------------------------... - 05:16 PM Bug #5608: Enable all FK constraints in Metacat production [copies]
- the server_location=5 docs are 'seabloom' and 'borer' prefixes:
borer.13.2
borer.14.2
seabloom.10.1
seabloom.6.2
... - 05:14 PM Bug #5608: Enable all FK constraints in Metacat production [copies]
- catalog_id = 27 is a "-//ecoinformatics.org//eml-software-2.0.0beta5//EN" doctype with docid=jdoe.23.1
We have that ... - 05:10 PM Bug #5608: Enable all FK constraints in Metacat production [copies]
- For the index errors we can safely delete the index records in violation of the constraint and apply it.
For the ser... - 05:08 PM Bug #5608: Enable all FK constraints in Metacat production [copies]
- The errors encountered were....
ALTER TABLE xml_documents ADD
CONSTRAINT xml_documents_rep_fk
FOREIGN KEY (server_lo... - 12:27 PM Bug #5608: Enable all FK constraints in Metacat production [copies]
- 14.4.9. Some Notes About pg_dump:
http://www.postgresql.org/docs/8.3/interactive/populate.html - 12:14 PM Bug #5608 (New): Enable all FK constraints in Metacat production [copies]
- Looks like the FK constraints have been removed from the production knb database.
> select conname, contype, conkey,... - 02:36 PM Revision 7170 (metacat): add "Generate System Metadata" button to the replication server list display. When clicked, we generate SM for records belonging to that source server. This is only enabled when DataONE has been configured.
- https://redmine.dataone.org/issues/2762
05/09/2012
- 03:45 PM Revision 7169 (metacat): expose serverLocation parameter to run GenerateSystemMetadata for different replication parters as needed.
- https://redmine.dataone.org/issues/2740
- 11:08 AM Bug #5604: Question how to add EPSG 900913 for Google layers and how list results within a bounding-box
- Hi Eva-Maria,
With Metacat 2.0.0 (which is still in a pre-release state) you'll be able to use the OpenLayers client ... - 01:08 AM Bug #5604 (Resolved): Question how to add EPSG 900913 for Google layers and how list results within a bounding-box
- Dear Metacat developer team,
I would like to ask you 2 questions:
1.)
I am trying to use Google maps as backgr...
05/08/2012
- 05:14 PM Bug #5599: absence of line feeds in eml causes pathQuery to not find some elements
- While this is indeed odd, my hunch is that we get a placeholder leaf node for the line feed that separates <attribute...
- 12:33 PM Bug #5599: absence of line feeds in eml causes pathQuery to not find some elements
- to clarify, these pathQueries were for
<queryterm casesensitive="false" searchmode="starts-with">
<value>... - 12:32 PM Bug #5599: absence of line feeds in eml causes pathQuery to not find some elements
- To diagnose this further:
(1)
I ran pathQuery for returnfield dataset/dataTable/attributeList/, that is, the whole x... - 04:30 PM Revision 7168 (metacat): only generate system metadata for original objects.
- https://redmine.dataone.org/issues/2721
05/07/2012
- 03:54 PM Bug #5599 (New): absence of line feeds in eml causes pathQuery to not find some elements
- Presence of line feeds seems to be needed for an eml doc to get loaded properly so pathQuery can find attributeList o...
- 08:08 AM Bug #5597: eml xsl templates incomplete
- changing version to 2.0.0, though this will require modifications to the EML project if we alter the default XSLTs
05/05/2012
- 06:32 PM Bug #5597 (Resolved): eml xsl templates incomplete
- Some xslt templates for eml transform to html are incomplete in metacat 2.0.0 (on lava).
Attached are two screensh...
05/04/2012
- 04:29 PM Bug #5518: Track down the performance issue of metacat query.
- Yeah. Kepler issues a query for different metadata type because the ecogrid could handle only one return doctype. I b...
- 03:26 PM Bug #5518: Track down the performance issue of metacat query.
- Running the same query (well, with "Insect" (not plural) so the results were not cached) with 50 threads makes this p...
- 02:43 PM Bug #5518: Track down the performance issue of metacat query.
- I wrote a small test that issues the same Metacat query to a given server with parallel threads (25 for this example)...
- 02:50 PM Revision 7167 (metacat): test for running concurrent Metacat queries to mimic Kepler data search.
- http://bugzilla.ecoinformatics.org/show_bug.cgi?id=5518
05/02/2012
- 04:21 PM Revision 7166 (metacat): check if person's equivalentIdentity list is null before processing recursively
- https://redmine.dataone.org/issues/2689
- 03:59 PM Revision 7165 (metacat): D1 common lib AuthUtils update
- 03:47 PM Bug #5518: Track down the performance issue of metacat query.
- There seems to be renewed concern that this is not resolved.
During the Kepler/sensor workshop Matt reported query pe... - 09:11 AM Revision 7164 (metacat): include testSynchronizationFailed() and call as the CN subject so that it is authorized.
- 09:06 AM Revision 7163 (metacat): use MN (self) as the Session.subject so that the MN.delete() call is successful.
- 08:58 AM Revision 7162 (metacat): handle authorization for delete() differently for CN vs MN.
- On the CN, only the CN (or tbd admin user) can call it.
On the MN, both the CN (or admin user) and the _same_ MN can ...
05/01/2012
- 02:55 PM Revision 7161 (metacat): comment out testDelete because it requires acting as the MN
- comment out testSynchronizationFailed because it requires acting as the CN
- 02:49 PM Revision 7160 (metacat): uncomment the MN tests (I bet this was an oversight during local testing)
- 02:48 PM Revision 7159 (metacat): add Session-less archive() method
- 11:59 AM Revision 7158 (metacat): jars with CN/MN.archive() libclient implementations
- 11:14 AM Revision 7157 (metacat): only admin users can call MN/CN.delete(). This is limited to any CN and only the MN that is calling itself
- 10:47 AM Revision 7156 (metacat): update the sysmeta data modified when setting archived=true
- https://redmine.dataone.org/issues/882
- 10:26 AM Revision 7155 (metacat): handle CN.archive() rest call: PUT /archive/{pid}
- https://redmine.dataone.org/issues/2678
- 10:25 AM Revision 7154 (metacat): correct log about 'archive' being called
- 10:15 AM Revision 7153 (metacat): handle 'archive' rest calls
- https://redmine.dataone.org/issues/2678
- 10:15 AM Revision 7152 (metacat): updated d1 jars
- 09:18 AM Revision 7151 (metacat): [optionally] do not archive the xml_documents and xml_nodes to *_revisions when 'deleting' a document. This will effectively guarantee that the document/data cannot be retrieved after delete.
- NOTE: D1 system metadata will persist (for now) so that the ID cannot be reused with the DataONE API but Metacat call...
04/30/2012
- 04:03 PM Revision 7150 (metacat): optionally remove the document/data file from the filesystem completely when 'deleting' it.
- https://redmine.dataone.org/issues/2677
- 03:42 PM Revision 7149 (metacat): newer d1 jars that include shared AuthUtilsmethod for isAuthorized() consistency
- https://redmine.dataone.org/issues/2661
- 03:35 PM Revision 7148 (metacat): implement MN and CN.archive() method -- really just the existing delete() methods.
- https://redmine.dataone.org/issues/2674
https://redmine.dataone.org/issues/2675 - 03:05 PM Revision 7147 (metacat): call MN.delete() for each replica when CN.delete() is called
- https://redmine.dataone.org/issues/2676
- 02:20 PM Revision 7146 (metacat): defer to AuthUtils for flattening out the equivIdent subject list.
- https://redmine.dataone.org/issues/2661
04/27/2012
- 10:24 AM Revision 7145 (metacat): check normal access control rules for getSystemMetadata before deferring to MN replica information that may grant MNs additional access to the SM.
- https://redmine.dataone.org/issues/2656
04/25/2012
- 03:33 PM Revision 7144 (metacat): include Session-less interface methods and updated jars that define them.
04/24/2012
- 10:42 AM Revision 7143 (metacat): use a shared ExecutorService for replicate() calls.
- https://redmine.dataone.org/issues/2623
04/19/2012
- 02:04 PM Revision 7142 (metacat): remove extraneous pid and permission parameters from isAdminAuthorized() method and make public so that it can be called in other locations - namely before our asynchronous replicate() implementation on the MN.
- 01:50 PM Revision 7141 (metacat): check for empty null (missing) node.subjectList. This should probably be a required element in the D1 schema, but it appears not. (ORNL entry was missing subjects in cn-dev environment)
- 11:57 AM Revision 7140 (metacat): just use the e.getMessage() as e.getCause() may be null (seeing NPE when testing via the MN IT tester)
04/18/2012
04/17/2012
- 04:02 PM Revision 7138 (metacat): added 2.0.0 targeted bugs to the release notes and fleshed out other major enhancements in the list
- 03:15 PM Revision 7137 (metacat): no not record EML access rules that use the "denyFirst" permOrder.
- https://redmine.dataone.org/issues/2614
- 09:20 AM Revision 7136 (metacat): needed to initialize the nodeList that stores matching nodes (by subject) -- this was the source of a NPE when we had a matching node subject.
04/16/2012
- 05:38 PM Revision 7135 (metacat): do not create docid-guid mapping unless we are supposed to write access rules for the data to the dbase
- https://redmine.dataone.org/issues/2572
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