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  • svn:ignore: build
  • svn:mergeinfo: /branches/D1_0_6_2_BRANCH:6107-6121 /branches/METACAT_2_6_BRANCH:9560-9586

# Date Author Comment
10276 05/17/2017 03:15 PM Jing Tao

Add the checksum parameter to the handleInsertAndUpdate method.

10274 05/17/2017 03:12 PM Jing Tao

Change the signature of the method handleInsertAndUpdate.

10272 05/17/2017 03:06 PM Jing Tao

Add code to check the check sum by the DigestOutputStream.

10270 05/17/2017 09:36 AM Jing Tao

Removed the duplicated code to check the checksum in the replicate method since the method D1Node.create, which is called by the replicate method, has the mechanism.

10268 05/16/2017 09:54 PM Jing Tao

Revised the method for testing replication. It did nothing but does test the replication between the mock mn and the local host.

10266 05/16/2017 09:50 PM Jing Tao

Add the replication source node into the node locator.

10264 05/16/2017 09:47 PM Jing Tao

Add some methods to support the replicate.

10262 05/16/2017 09:14 PM Jing Tao

Add a mock mn node as the source node during a replication operation.

10260 05/16/2017 02:23 PM Jing Tao

Add a integration test.

10259 05/16/2017 02:22 PM Jing Tao

Add two properties will be used in the dataone replication test.

10249 05/11/2017 10:43 AM Jing Tao

Add some debug information.

10247 05/10/2017 08:12 AM Chris Jones

Change MetacatHandler.generateOutputName() to use the SystemMetadata.fileName value when it is available. Needs testing.

refs https://projects.ecoinformatics.org/ecoinfo/issues/7187

10245 05/04/2017 11:49 AM Matt Jones

Define location of the AWS binary so the tool works under CRON.

10244 05/03/2017 11:25 PM Matt Jones

Modified backup script to improve efficiency.

Now, lists of metadata and data files that were last backed up is stored in the /var/metacat/metacat-backup folder, and
these are diffed with the current file lists to discover new files. These are then copied to AWS S3. The AWS...

10243 05/03/2017 02:23 PM Jing Tao

Add the release note for the 2.8.2 version.

10241 05/03/2017 02:11 PM Jing Tao

The metacatui version was changed to 1.14.1

10239 05/02/2017 04:41 PM Jing Tao

Add the code to filter out the pids with white spaces in the query.

10237 04/25/2017 11:23 PM Matt Jones

Add backup script to copy files to Amazon S3.

10227 04/20/2017 03:10 PM Jing Tao

Call the method TripleStoreService.destroy to delete the dataset.

10225 04/13/2017 04:06 PM Peter Slaughter

Disable indexing of 'prov_hasSources' field

10224 04/13/2017 03:15 PM Peter Slaughter

Fix problem with prov_hasSources not being indexed

10221 04/10/2017 03:05 PM Peter Slaughter

Add check in iindex unit test for 'prov_hasDerivations' field

10220 04/10/2017 02:31 PM Peter Slaughter

Fix problem where 'prov_hasDerivations' field not being indexed (metacat issue 7176)

10219 04/07/2017 04:33 PM Jing Tao

Make sure it is same as branch 2.8 except the mdq stuff

10218 04/07/2017 04:29 PM Jing Tao

Still use syncFailed.getPid to get identifier in the syncFailed method.

10217 04/06/2017 04:42 PM Jing Tao

Fixed typos in the vairable name.

10216 04/06/2017 04:36 PM Jing Tao

In the synchronizationFailed method, use syncExcpetion.getIdentifier method to try before the obsoleted method getPid.

10215 04/06/2017 04:24 PM Jing Tao

Change the version to 2.9.0

10214 04/06/2017 04:24 PM Jing Tao

change the version to 2.9.0. Change the version of the d1_denpendency to 2.4.

10213 04/06/2017 04:22 PM Jing Tao

Change the version to 2.9.0

10212 04/06/2017 04:22 PM Jing Tao

Change the version to 2.9.0

10211 04/06/2017 04:21 PM Jing Tao

Change the version to 2.9.0. Change the version of the d1 dependency to 2.4.

10210 04/06/2017 04:17 PM Jing Tao

Modify version to 2.9.0

10209 04/06/2017 04:14 PM Jing Tao

Add the script to upgrade the db to 2.9.0

10207 04/06/2017 02:34 PM Jing Tao

Move a statement e.printStactTrace to the logMetacat.error method.

10206 04/06/2017 09:51 AM Chris Jones

Add the 'Collaborator' role to the list of roles in the EML Registry CGI.

refs https://github.com/NCEAS/metacatui/issues/78

10205 04/06/2017 08:54 AM Jing Tao

In the expandRightHolder method, we don't use the parameter count=-1 to query the cn. Now we use count=200 and will use the page query to query again if it is necessary.

10202 04/05/2017 03:06 PM Jing Tao

Add the debug statement.

10201 04/05/2017 03:04 PM Jing Tao

Add the debug statement.

10200 03/28/2017 12:55 PM Lauren Walker

Remove extra <table> HTML element that was causing rendering issues with the enumerated domain template

10199 03/27/2017 04:12 PM Jing Tao

Add the method name and line number in the statment.

10198 03/27/2017 04:11 PM Jing Tao

Add the method name and line number in the statement.

10195 03/24/2017 06:30 PM Bryce Mecum

Fix broken links in taxonomy section of registry guide

10194 03/23/2017 10:17 AM Bryce Mecum

Fix a typo that was preventing dateTime attributes from rendering fully

10193 03/14/2017 03:57 PM Jing Tao

Add more debug statement on cn.create method.

10191 03/09/2017 05:47 PM Bryce Mecum

If EML physical/size/@unit isn't specified, assume its bytes

Previously, if the unit attribute wasn't set on an EML physical size
element, the size showed up as just the number with no units. The EML
spec says that, if unit is omitted, bytes is the assumed unit.

10190 03/07/2017 10:27 AM ben leinfelder

include multiple creators for DOI test

10189 03/06/2017 04:58 PM ben leinfelder

add test to check if creator value is correctly being extracted from eml when registering with EZID. https://github.nceas.ucsb.edu/KNB/arctic-data/issues/143

10188 03/06/2017 04:22 PM ben leinfelder

extract EML creator[s] and use those names or organizations when registering DOI with EZID. https://github.nceas.ucsb.edu/KNB/arctic-data/issues/143

10187 03/01/2017 02:17 PM Jing Tao

Add a test method to test the method check if a local id is in the xml_revision table.

10186 03/01/2017 02:16 PM Jing Tao

In the archive method, add a new mechanism to check if the local id is in the xml_revision table if it is not in the xml_documents table.

10185 03/01/2017 02:14 PM Jing Tao

Add a new method to determine if a docid and rev is in the xml_revision table.

10181 02/28/2017 02:58 PM Jing Tao

Add more permission tests on the archive method.

10180 02/28/2017 02:58 PM Jing Tao

Give the users having change-permission to archive an object which is from a v1 node.

10176 02/08/2017 05:19 PM Jing Tao

Check the change of the access rules on data objects only when we need to write access rules base on the access part of the eml document.

10175 02/08/2017 05:18 PM Jing Tao

Check the change of the access rules on data objects only when we need to write access rules base on the access part of the eml document.

10174 01/24/2017 12:40 PM Bryce Mecum

- Clean up isoroot selectors and comments. Use relative xpaths when possible
- Clean up the output of the ex module
- Misc whitespace/formatting fixes

10173 01/17/2017 01:07 PM ben leinfelder

Ensure XML run response from quality engine. Use mock http request to ensure correct save behavior of the resulting run. https://projects.ecoinformatics.org/ecoinfo/issues/7171 and https://github.com/NCEAS/mdqengine/issues/73

10172 01/06/2017 04:36 PM ben leinfelder

Trigger MDQ when inserting or updating metadata documents. https://projects.ecoinformatics.org/ecoinfo/issues/7171 and https://github.com/NCEAS/mdqengine/issues/73

10171 01/04/2017 06:30 PM ben leinfelder

index the multiple values provided by award number lookup. https://github.com/NCEAS/mdqengine/issues/72

10169 12/29/2016 02:26 PM Bryce Mecum

Clean up ISO stylesheet formatting

10168 12/28/2016 01:38 PM Jing Tao

Fixed a typo.

10166 12/28/2016 11:53 AM Jing Tao

Add a new completed task.

10164 12/28/2016 10:42 AM Jing Tao

The indexall action will be run on another thread.

10162 12/27/2016 02:17 PM Jing Tao

Change the default test replication server.

10160 12/22/2016 06:17 PM Bryce Mecum

Start the basis for gmd:distributionInfo

10159 12/22/2016 06:02 PM Bryce Mecum

Minor tweaks and code cleanup to ISO XSLT

- Renamed the folder once more to be more correct

10158 12/22/2016 05:58 PM Bryce Mecum

Improve the EML XSLT's handling of ORCIDs as userIds

10155 12/21/2016 06:28 PM Jing Tao

Remove the referenced bean rdfXmlSubprocessor which was on the removed file application-context-oa.xml.

10154 12/21/2016 05:11 PM ben leinfelder

remove unused OA indexing file and reference

10153 12/21/2016 04:15 PM Jing Tao

Add the provenence subprocessor.

10152 12/21/2016 03:46 PM Jing Tao

Change the metacat ui version to 1.13.3

10150 12/21/2016 03:00 PM Jing Tao

Add the release note for the 2.8.1

10148 12/21/2016 02:34 PM ben leinfelder

extract "metadata" fields from result output now rather than dedicated fields in the model

10147 12/21/2016 02:30 PM Jing Tao

Change the param from the class field to a local variable.

10145 12/21/2016 12:06 PM Bryce Mecum

Add support in the EML XSLT for making ORCID userIds into links

10143 12/21/2016 11:25 AM Chris Jones

Remove the inadvertant UTF-8 BOM from the beginning of the file, and initialize the contact variable properly (again).

10142 12/21/2016 09:15 AM ben leinfelder

include group lookup field in mdq indexing

10141 12/20/2016 06:49 PM Bryce Mecum

Multiple changes to the ISO XSLT

- Renamed base folder from iso to iso19139
- Added a short_citation template for showing thesauri in tight places such as the keywords list
- Tweaked the geographic coverage output so the static maps render in Metacat UI

10140 12/16/2016 12:02 PM Jing Tao

Change the condition that remove identifier from the identifier table in the method removeSystemMetaAndIdentifier.

10138 12/16/2016 10:48 AM Jing Tao

Add the pid in a debug statement.

10136 12/15/2016 07:31 PM Jing Tao

Add the sql to register schema files for the format id fgdc-st-001.1-1999.

10134 12/15/2016 07:29 PM Jing Tao

Add the sql to register schema files for the format id fgdc-st-001.1-1999.

10131 12/15/2016 04:28 PM Matt Jones

Added XSD files for the 1999 FGDC Biological Data Profile Schema.

10130 12/15/2016 02:41 PM Jing Tao

Add the code to check if the object does exist in the create method. If it doesn't, the system metadata and identifier will be removed.

10129 12/15/2016 02:40 PM Jing Tao

Change the calling code when the method insertOrUpdateDocument signature is changed.

10126 12/15/2016 12:36 PM ben leinfelder

use text() in xpath for multi-valued funder extraction

10125 12/14/2016 03:21 PM Jing Tao

Add the test method for the new methods to determine if an object file does exist or not for the given local id.

10123 12/14/2016 03:18 PM Jing Tao

Add methods to determine if the object does exist with the given local id.

10121 12/14/2016 03:08 PM Jing Tao

Add a resource map file for testing.

10119 12/13/2016 05:20 PM ben leinfelder

correct xpath an solr settings for funder field

10118 12/13/2016 02:43 PM Jing Tao

Add some performace debug information.

10116 12/13/2016 01:09 PM ben leinfelder

make funder a multivalued field.

10115 12/13/2016 11:36 AM ben leinfelder

extract check.echo.funder.1 output value for the "funder" index field

10114 12/12/2016 11:57 AM Jing Tao

Add the code to handle the merge-needed fields having multiple pairs.

10112 12/09/2016 03:39 PM Jing Tao

During index merging process, if a field is a system metadata field and current document doesn't have the field, we don't need to merge it from the existing solr document.

10110 12/08/2016 02:20 PM Jing Tao

Change the id since the original one doesn't exist in the group anymore.

10108 12/08/2016 02:18 PM Jing Tao

Add junit test methods for testing circular obsoletes/obsoletedBy chain in the mn.updateSystemmetadata method.

10106 12/08/2016 02:15 PM Jing Tao

Add methods to check if there are circular obsoletes/obsoletedBy chains in the mn.updateSystemmetadata method.

10104 12/07/2016 04:06 PM Jing Tao

Don't share the same executor in the two classes.