Metacat

This is just a code cleanup patch that re-aligns some indentations and removes
some debugging code.

As a partial fix to http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2747,
I've modified AuthLdap.getGroups() and removed the code that handles LDAP
referral connect and search timeout issues in a separate thread. I've replaced
this code with ReferralException code that uses two JNDI parameter settings:...

As a partial fix to http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2747,

I'm applying 3 patches to AuthLdap.java that simplify the code that addresses
timeout issues when connecting and searching referral LDAP databases, fixes the
getGroups() method to correctly get groups in referral LDAP databases, and does...

As part of a fix for http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2747,
I'm adding a few configuration parameters to metacat.properties:

1) ldapconnecttimelimit limits the time in milliseconds allowed for
LDAP server connections. This reduces the impact of any single...

Added note to README regarding buildIndex fixes in bug 2469

Fixed the implementation of the buildIndex function which was not
working for new document insertions. A previous fix in updatePathIndex
for ATTRIBUTE data inadvertantly caused a foreign key duplication
exception for insertions of ELEMENT nodes when multiple relative paths...

Added additional organizations to the login dropdown list for the
Kruger skin.

Add code to handle double quotes in normalize method.

I'm fixing a compile problem under jdk 1.4.2, where the get() method in
HashMap needs an Object as a parameter, not a primitive data type. I changed
the long to a Long as the lookup key.

As part of a patch fix for:

http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2469

I've changed DocumentImpl.java in three locations:

buildIndex()
  traverseParents()
  updatePathIndex()

This patch modifies buildIndex(). Like the prior two patches, it changes...

As part of a patch fix for:

http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2469

I've changed DocumentImpl.java in three locations:

buildIndex()
traverseParents()
updatePathIndex()

This patch modifies traverseParents(). It changes pathsFoundForIndexing from...

As part of a patch fix for:

http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2469

I've changed DocumentImpl.java in three locations:

buildIndex()
traverseParents()
updatePathIndex()

This patch modifies updatePathIndex() by changing the pathsFound input...

As part of a patch fix for:

http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2469

I've added a second constructor to PathIndexEntry.java. The first
constructor is used to represent a record entry from the xml_index
table, and the new second constructor represents a record entry in...

As part of a patch fix for:

http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2469

I've added the complimentary setter methods to the getter methods
that are already present in the class:

setNodeId()
setNodeName()
setParentNodeId()
setNodePrefix()
setNodeIndex()...

added a method to query metacat to see if a particular docid is registered or not

finally got the getallids function working

added functionality to get a list of ids used in the system

added getalldocids function to get all docids that match a certain scope.

Change the timedReplication value from "on off" to "true false".

Add index.html in welcome file list.

ESA server does some funky things to relative URLS so we have to hardcode the esa skin urls to use a specific root and context

Added an explanation of john h's old spatial diagrams

mention ruby client in readme

added gpl header to php metacat lib

Initial import of Chad Burt's ruby metacat client

Remove utilities.jar as part of distsrc target to allow compiling releases under different jdk versions

updated version number and readme

added database upgrade script to 1.7 build process

initial import of metacat php client

some clarifications on spatial install process

Add a script can delete xml_revision records.

The first complete draft of the spatial documentation.

Add a script to delete documents manually.

Minor updates to python module ... default urls and license info

Make world map the default for the common spatial template

Added preliminary support for multiple spatial schemas in the same metacat instance .. bug 2551

Fixed mapbuilder loading image when wms is down .. bug 2695

Initial architecture for dynamically generating SLD/OGC:Filter documents to control which docids get shown on the map. The sldfactory servlet is in place to handle this but is not fully functional since there is currently no way to quickly and dynamically generate a list of allowable docids with a level of performance acceptable for real-time web mapping.

Add lter and other institute into option list.

Add lter and other institutes into option list.

Improved data point styling. Thickened and smoothed the white outline by stacking two fill rules rather than one fill plus stroke.

Changed SLD wizard paths to relative instead of assuming context name was geoserver. Patch has been submitted to geoserver dev team.

removed old geoserver/geotools jars that were causing some trouble

upgrade to geoserver 1.4rc5

shortened the latitude/longitude to lat/lon to save screen space

slowly improving the spatial docs

Added changelog for 1.7.0 to readme file. Updated version number in properties.

some quick additions and fixes to the python metacat readme

Initial import of prototype python client library to interact with metacat

Changes to map layout and skins according to input from Callie and Matt

Removed tomcat 3 support

Merged the spatial web.xml.combined into the default web.xml.tomcat5

minor changes to khtml detection stategy

safari/opera detection for interactive map. Users of non xslt-compliant browsers will be redirected to an error page.

Changing initial configured status back to false

Set configured to false initially. Include notification in configure process that geoserver password needs to be changed plus instructions on how to do so

Updated MetaCatServlet so that it supports a web-based interface for configuring its own properties the first time it is run (determined by the property "configured" being set to false). Which properties are exposed in the web interface is determined by the list of properties in the 'metacat.properties.metadata' file. This file is managed by the new OptionsMetadata class in the utilities module, and provides information that allows metacat to build a human-readable configuration page for the properties. Still need to finish filling out the information in metacat.properties.metadata for the rest of the properties that we want to be editable. This autoconfiguration process is the first step towards building a turnkey installer for metacat....

Ensure that spatial operations are only triggered when runSpatialOption is set to true.

Initial import of interactive map components for the following skins: esa, knb2, knp, obfs, nceas, nrs

restored original styles to knp-specific layers

I've added new properties called "styled-shared-path" and
"style-shared-relpath" that represent the directory in
$METACAT_HOME/lib/style/shared. This directory contains shared XSL
stylesheets that are similar to those found in $METACAT_HOME/lib/style/common,...

I'm adding a set of EML XSL stylesheets that are separate but similar to those
found in the lib/style/common directory. I have created a directory called
'shared' (in libstyle) and put these modified stylesheets within it in order
to maintain backward compatibility with skins that were written previously...

I'm adding the two html templates from the OBFS skin developed by Matt Jones.
These were used as reference files in the PISCO skin.

I'm adding the two jsp files that originated in the KNB skin developed
by Matthew Brooke, modified for the PISCO skin.

I'm adding the PISCO-specific XSL stylesheets used to transform EML documents to PISCO web pages. Notice that resultset.xsl is now in this templates directory, rather than in lib/style/common since it has PISCO-specific styling.

I'm adding in a number of supporting image files that make up the PISCO header, navigation bar, and footer sections of the styled web pages.

I'm adding the legacy PISCO skin to metacat as a starting point to doing CSS-based XSL styling of XML documents in the data catalog. These files were based off of the OBFS and KNB skins.

Removed the hadcoded servlet context and instead get it from the HTTP request to allow the config files to be installed in any context.

Updated mapbuilder interface with some cosmetic changes, the demis world map wms layer, removed faulty scalebar, added named regions from morpho to the location dropdown.

Beta version of openalayers wms interface

Beta version of openalayers wms interface

Removed useless mapbuilder ppts which may have viruses

Modified the configuration classes to allow configuration through the web interface of all of the properties set in the metacat.properties file. The layout of this form still needs work, in particular because java.util.Properties does not maintain any order for the properties, nor does it allow for metadata about each property to be set and saved in the file. We can probably overcome this by creating a shadow file that lists all of the options and their metadata (such as grouping, controlled values, etc).

Renamed method.

Began work on a web interface for configuring metacat at runtime. This system
checks the 'configured' property when metacat starts up. If configured=false, then
it loads an HTML form containing the properties that need to be set. The user configures the properties and they are written into the metacat.properties file. Then metacat needs to be restarted. ...

Eliminated the 'release' ant tag from the rest of the files. The 'release' property is still used in build.xml for creating releases, but the filter is no longer presnt. Now, when updating the metacat files for a release, you have to set the release version in both the build.xml and the metacat.properties files.

Eliminated unneeded log information in source code file.

Eliminated the MetacatUtil.printMessage() method in favor of using the Log4J debugging methods.

Removed the release ant token from all files in 'src'.

Changed the filename that is used when data files are downloaded and when XML files are downloaded in XML format. Now, data files use the format "docid-docname". See bug #2566.

initial import of html versions of spatial option documentation

initial import of html versions of spatial option documentation

Only run spatial cache regeneration once. Plus some fixes to spatial_query action api.

install.spatial no longer optional since metacat servlet requires some geotools libs. Spatial option can be still be turned off in metacat.properties

added new namespace to the kepler skin

Changed float object handling in spatial components in order to compile on jdk 1.4.2

Ensure that spatial cache respects changed access constraints for updated documents

Ensure that spatial cache respects changed access constraints for updated documents

example build properties files for win and ubuntu platforms

Added some install docs specific to ubuntu and windows setups

Trimmed down initial shapefiles. They must exist in order to start geoserver properly but there's no need for them to have actual data, just a dummy feature with the proper geometry type (multipoint, multipolygon).

Removed most (all?) of the deprecated spatial metacat code from head

Modified backup script to exclude the backup archives themselves rom the tar file.
This recursion had caused a disk full error at KNP.

changed the name of the repository

adding xml-apis

adding xalan.jar

fixed errors in xalan.jar location

read the schema-specific doc title from metacat properties

Correctly cache doc title in the spatial cache

Temporary fix for KML output; geoserver can only handle the points layer