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Aaron Aaron's activity

From 01/02/2010 to 01/31/2010

01/28/2010

12:45 PM Kepler Bug #4322: Attempting to save changes to a workflow saved in a KAR file fails
Yeah, this still needs to get done. Will make sure to get it into the RC1 release. Aaron Aaron
12:42 PM Kepler Bug #4515: Finish and Document the Save/Open KAR file functionality
I think we can close this one now. All core save/open kar functionality has been completed. If we need better docum... Aaron Aaron
12:28 PM Kepler Bug #4483: Module dependencies in MoML files
Chad I've added code to ImportModuleDependenciesAction that rebuilds the library after new modules are downloaded. T... Aaron Aaron

01/27/2010

09:05 PM Kepler Bug #4662: roll revision vs. new object ID
This sounds like a WRP specific issue. Reassigning to Ben for the meantime.
Oliver the short answer to having Objec...
Aaron Aaron
08:54 PM Kepler Bug #4559: local repositories not showing up in components tree
Oliver, can you recheck if this is still happening and close this bug if it is covered in other bugs or succinctly st... Aaron Aaron
08:42 PM Kepler Bug #4704: Generate XML for a KARFile
Shell code has been created in the core module: org.kepler.kar.karxml.KarXmlGenerator Aaron Aaron
08:42 PM Kepler Bug #4704 (Resolved): Generate XML for a KARFile
Create an XML string based on the Manifest and Entries of a KARFile.
See the example karxml file at the bottom of
...
Aaron Aaron
05:13 PM Kepler Bug #4463: Grey out component names in the component library that can not be dragged to the canvas
It is unlikely we will need/want to do this in the future. Closing this bug. Aaron Aaron
05:07 PM Kepler Bug #4317: KAR's dependencies on modules need to be included in KAR metadata
A KAR's module dependencies are now included in the KAR manifest file and are accessible through the KARFile class. Aaron Aaron
05:04 PM Kepler Bug #1750: Allow KAR files to include jar/class files
It was agreed that the solution to this is to create a java utility for converting KAR files to Kepler modules. See ... Aaron Aaron
05:03 PM Kepler Bug #4702 (Resolved): KAR to module conversion utility
Create a utility that converts KAR files (version 1.0 and 2.0) to Kepler modules.
This was previously bug 1750.
Aaron Aaron
04:54 PM Kepler Bug #4633: LSID conflicts
Closing this bug. Opening a new bug (bug 4701) with the one remaining task of moving the LSID_GENERATOR table. Aaron Aaron
04:53 PM Kepler Bug #4701 (Resolved): Persistent Database needed in Core Module for LSID generation to prevent namespace updating on clean-cache
The need to use a database table to generate new LSID revisions (ref bug 4633) spawned a new database table called LS... Aaron Aaron

01/26/2010

02:52 AM Kepler Bug #4630: creating and changing relations don't trigger LSID bump
Workflow LSID revision is now being updated when creating, editing, deleting, or moving relations. It is somewhat no... Aaron Aaron

01/25/2010

04:57 PM Kepler Bug #4304: Progress monitor is blank when authenticating for KAR upload
I don't think we will have this progress monitor anymore. The new solution is to use the wait cursor instead which i... Aaron Aaron
04:45 PM Kepler Bug #4570: dangling file handle for KARs
Fixed now, just needed to call the close() method on the KARFile after opening it. Aaron Aaron

01/24/2010

08:08 PM Kepler Bug #4380: Removing LocalRepository does not remove actors from Ontologies
(In reply to comment #2)
> Fixed in rev 22588
*rev 22589
Aaron Aaron
08:07 PM Kepler Bug #4380: Removing LocalRepository does not remove actors from Ontologies
Fixed in rev 22588 Aaron Aaron
04:23 PM Kepler Bug #4362: component search performance
Since the search has been integrated into the Library Index and the Library no longer uses the ActorMetadata objects ... Aaron Aaron
04:18 PM Kepler Bug #4629: Undo doesn't roll LSID revision
Undo and redo actions now roll the revision of the lsid in workflows. As of rev 22588 Aaron Aaron
12:34 PM Kepler Bug #4581: Handle multiple revisions of components in the Component Library
This solution is working well now. Closing this bug. Aaron Aaron

01/19/2010

04:30 PM Kepler Bug #4679 (Resolved): Workflow Name in Workflow Run Manager is not updated when renaming workflow
Does this have something to do with the Provenance Database design? Perhaps it can be solved by adding a Name column... Aaron Aaron
03:05 PM Kepler Bug #4334: Rename actor from canvas
Quite possibly, can you check? Aaron Aaron
02:10 PM Kepler Bug #4334: Rename actor from canvas
I have added "Rename" menu item to the canvas context menu. This allows the user to rename a workflow without having... Aaron Aaron

01/13/2010

04:12 PM Kepler Bug #4629: Undo doesn't roll LSID revision
Problems with LSIDs not getting updated properly need to be solved before 2.0.0 Aaron Aaron

01/08/2010

12:49 PM Kepler Bug #4516: Module Manager needs ability to install modules needed by KARs
There should always be user input when downloading new modules. Imagine that you are running the Kepler suite, then ... Aaron Aaron
 

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