Activity

From 05/11/2008 to 06/09/2008

01:17 PM Bug #3388 (New): error running simihofi.xml workflow in Kepler 1.0.0: I get the following error when I first open the simihofi.xml workflow (though the workflow does run):
Error encoun... Kirsten Menger-Anderson

12:41 PM Bug #3369: Kepler will not start (OS X 10.52) as JavaApplicationStub is not executable: Actually, It seems as if the copy is OUT of the Kepler/lib directory, but either way, it didn't happen on my Mac. The... Stuart Jefferys
12:25 PM Bug #3369: Kepler will not start (OS X 10.52) as JavaApplicationStub is not executable: I figured out what is at the root of this issue. I use a CASE-SENSITIVE file system. I bet the test mac systems are n... Stuart Jefferys
12:40 PM Bug #2315: Unable to run multiple Kepler instances simultaneously: Another solution is to run the HSQL server in the first Kepler's JVM; subsequent Kepler instances could then contact ... Daniel Crawl

10:19 AM Bug #3369: Kepler will not start (OS X 10.52) as JavaApplicationStub is not executable: I just tried to reproduce this on my mac, but couldn't. I'll make a note to change the JavaApplicationStub to execut... Chad Berkley
09:45 AM Bug #3369: Kepler will not start (OS X 10.52) as JavaApplicationStub is not executable: At least at some point in the past, I ran into this problem and had added a task to the installer to make the JavaApp... Dan Higgins

10:19 PM Bug #3369 (Resolved): Kepler will not start (OS X 10.52) as JavaApplicationStub is not executable: As installed, I could not run Kepler at all. Nothing in the GUI indicated why it didn't start, but a permission error... Stuart Jefferys
07:23 PM Bug #3363: Show name checkbox does nothing for most Parameters: I'm not sure about this one.
In 2001, Edward wrote:
> I've added a mechanism for controlling whether the name of an
>... Christopher Brooks
07:11 PM Bug #3361: parameters lose their Display Name when copy and pasted: I've partially fixed this.
1) NamedObj._exportMoMLContents() now exports the value of _displayName
if it is non-null.... Christopher Brooks
11:33 AM Bug #3203: Add dateType: closing, dan crawl has checked in a DateToken and related code in kepler/date/ Derik Barseghian

05:39 PM Bug #3363 (Resolved): Show name checkbox does nothing for most Parameters: steps to reproduce:
- Drag Parameter to canvas
- Right click, Customize Name
- Check or uncheck the Show Name box
... Derik Barseghian
05:26 PM Bug #3361: parameters lose their Display Name when copy and pasted: Also, why "New name" ? It seems like it should just be Name and Display Name. Derik Barseghian
05:23 PM Bug #3361 (In Progress): parameters lose their Display Name when copy and pasted: It may be this is the 'proper' behavior, but it doesn't seem so to me (cxh?).
steps to reproduce:
- Drag Paramete... Derik Barseghian

01:34 PM Bug #3349: RExpression getUniqueFileName functionality is broken: Fixed.
- added overloaded getUniqueFileName method that also takes portname as an argument.
- using this method, my... Derik Barseghian
12:20 PM Bug #3349 (Resolved): RExpression getUniqueFileName functionality is broken: My fix to bug #3324 has broken getUniqueFileName functionality, so e.g. if you have two actors with the same name (e.... Derik Barseghian

03:56 PM Bug #3324: RExpression actor doesn't output properly with >1 dataframe output port: Sorry -- fix was checked in may 27, not yesterday. Derik Barseghian
03:54 PM Bug #3324: RExpression actor doesn't output properly with >1 dataframe output port: Closing, I checked in a fix yesterday. Port name is now prefixed to filename when data is serialized to disk for data... Derik Barseghian
02:25 PM Bug #3339 (Resolved): directory param Browse button for External Execution actor doesn't work properly: The 'Browse' button for the directory parameter for this actor doesn't allow you to select a directory -- only a file... Derik Barseghian
11:01 AM Bug #3333 (New): "configure actor" dialog box changes after "documentation->display": With a workflow loaded into Virgil, right click on an actor and select "Configure Actor". Note the contents of that d... Paul Allen

08:56 PM Bug #3332: RExpression_Matrix_IO_Test workflow gives an error: I should note I'm seeing that error on stdout, not in the gui.
I have the same version of R as you on both Ubuntu an... Derik Barseghian
04:59 PM Bug #3332: RExpression_Matrix_IO_Test workflow gives an error: what version of R are you running?
I've got:
R version 2.6.2 (2008-02-08)
Copyright (C) 2008 The R Foundation for St... ben leinfelder
04:54 PM Bug #3332 (Resolved): RExpression_Matrix_IO_Test workflow gives an error: RExpression_Matrix_IO_Test workflow gives this error. This bug slipped into Kepler release too.
java.lang.NumberFo... Derik Barseghian
11:53 AM Bug #3324 (Resolved): RExpression actor doesn't output properly with >1 dataframe output port: If you configure the R actor to have more than 1 dataframe output port, only the last dataframe used is output throug... Derik Barseghian

01:23 PM Bug #3312 (Resolved): DataTurbine (formerly RBNBToKepler) actor - error with empty server: DataTurbine actor gives an error when trying to connect to a server that is running but contains no data channels. It... Derik Barseghian

08:02 PM Bug #3300: CompositeActor does not support multiport: You need to explicitly set the width of the input link inside the composite.
See below.
I've opened a RFE in Ptolem... Christopher Brooks
04:06 PM Bug #3300 (Resolved): CompositeActor does not support multiport: You can create a CompositeActor with input and output ports that are set as Multiports, but only the first value on t... ben leinfelder

12:13 PM Bug #3292: ENM/GDAL_h1K_NS workflow giving an exception: Ah, I see comment #2 on bug 3291 now (general disclaimer in demos/Readme.txt for all workflows).
I will bump this to ... Derik Barseghian
11:33 AM Bug #3292: ENM/GDAL_h1K_NS workflow giving an exception: SEEK/garpModel_ImageJ, also gives a similar "Can't load IA 32-bit..." problem on ubuntu 8.04.
ENM/GARP_Multispecies... Derik Barseghian
12:10 PM Bug #3291: IPCC_ChangeNightlyBuildTest got an exception: I have this problem too, on mac 10.5.2 and ubuntu 8.04. Derik Barseghian
11:43 AM Bug #3295 (New): Python/Ptolemnizer welcome text does not display: A minor annoyance, but the SampleDelay actor's "Welcome to the..." text is not displaying in the InteractiveShell as ... Derik Barseghian

06:04 PM Bug #3292 (New): ENM/GDAL_h1K_NS workflow giving an exception: I upgraded to ubuntu 8.04 today, and now the GDAL_h1K_NS workflow is giving an exception (i'm using java 1.5.0_13).
... Derik Barseghian
12:33 PM Bug #3290: DarwinCore_test workflow takes forever to downloading data: I put a general disclaimer in the demos directory so that this will not delay the release. Chad Berkley
12:33 PM Bug #3291: IPCC_ChangeNightlyBuildTest got an exception: I put a general disclaimer in the demos directory so that this will not delay the release. Chad Berkley
12:31 PM Bug #2872: md5 checksums: done. Chad Berkley
12:31 PM Bug #3122: Get installer size down: Installer sizes are as follows:
-rw-r--r-- 1 berkley berkley 104866787 2008-05-12 11:04 kepler-linux-1.0.0.jar
-rw-... Chad Berkley
09:41 AM Bug #3266: ENM/GARP_MultipleSpecies-V.xml problems: Matt and I have decided to go ahead an release these workflows with the
following annotation attached:
ATTENTION ENM... Chad Berkley

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