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From 02/16/2010 to 03/17/2010

03/18/2010

11:27 PM Revision 5284 (metacat): Updated MetacatRestClientTest so that the tests are actually calling fail()
when errors occur, and fixed all sixteen tests so that they run successfully
and can be run from any client (i.e., th...
Matt Jones
11:22 PM Revision 5283 (metacat): Fixed bug in getNextRevision() where "error" documents were not being
detected properly before searching for the next identifier. Matt Jones
06:54 PM Revision 5282 (metacat): Added initial support for arbitrary string identifiers in metacat (referred to as a guid). The new identifier table is used to map arbitrary string identifiers to Metacat's current docid format (referred to as the localId). Added a new IdentifierManager class to manage this table, adding new mappings as objects are added to the system. Modified the MetacatTest service to utilize this mapping table to look up a localId from a guid. IdentiferManagerTest is working with these guids now, as is the MetacatTest service get() method, but other parts of the system are unaware of them (e.g., create, update, delete operations are unaware, and no mapping is created when new documents are created). As a consequence, the MetacatRestClientTest is not working (although it also had lots of hardcoded dependencies that need to be fixed as well).
Matt Jones

03/17/2010

03:29 PM Bug #4130: data tables in KNB display dataTable->physical->objectName
Changed the xsl to only use the entityName Michael Daigle
01:33 PM Bug #4886 (New): "DatabaseService is already registered" error after configuring Metacat
I installed Metacat from 1.9.2 branch and configured it successfully. Then I typed
the url on the browser:
http://c...
Jing Tao

03/16/2010

01:40 PM Bug #4130: data tables in KNB display dataTable->physical->objectName
(In reply to comment #4)
> In my opinion, entityName is a lot lett predictable than objectName. In
> morpho, the use...
Jim Regetz
02:12 AM Revision 5277 (metacat): Added copyright, license, and class documentation.
Matt Jones
12:33 AM Revision 5276 (metacat): Modified table structure to change identifiers table (previously unused) to
represent a mapping between arbitrary string identifiers and metacat docids.
More information in https://trac.dataone...
Matt Jones

03/12/2010

01:23 PM Bug #4130: data tables in KNB display dataTable->physical->objectName
Jim,
I think you should talk this over with Mark -- he was the one who made the strong case for using objectName, an...
Matt Jones
12:32 PM Bug #4130: data tables in KNB display dataTable->physical->objectName
It turns out showing both names looks a little odd when they are identical (which is usually the case), and potential... Jim Regetz

03/11/2010

01:15 PM Bug #4834: Request to modify document redirects to registry home after login
After system installation and configuration, the admin user remains logged in. This seems to confuse the registry co... Michael Daigle

03/10/2010

02:55 PM Bug #4841: Review page for new data registration omits spatial/temporal info
The confirmData.tmpl script was looking at module.temporal and module.spatial properties from esa.properties. These ... Michael Daigle
01:14 PM Bug #4691: Registry mixes up users when saving
Added a separate method in register-dataset.cgi to create a creator section in the document that is different from th... Michael Daigle

03/09/2010

09:28 AM Bug #4871: Need a new tag for utilities module on Metacat 1.9.2 release
Created UTILITIES_1_0_1 tag and updated metacat build.xml to use this tag. Michael Daigle
10:49 PM Revision 5268 (metacat): Fixed typos in metacat documentation.
Matt Jones
09:39 PM Revision 5267 (metacat): Removed version as not sure when this will be delivered, so be agnostic.
Matt Jones
07:31 PM Revision 5266 (metacat): Adding new documentation section for Metacat design documents in Sphinx/ReStructured Text format. Build this documentation using the
provided Makefile, assuming that both Sphinx and PlantUML are installed and on the local executable path by running '... Matt Jones

03/08/2010

03:31 PM Bug #4838: Permissions error for link contained in Data Set Citation section
Added the session Id to the read url and it works. Michael Daigle

03/05/2010

05:02 PM Bug #4871 (Resolved): Need a new tag for utilities module on Metacat 1.9.2 release
I just fixed bug 4866. http://bugzilla.ecoinformatics.org/show_bug.cgi?id=4866
This fix involves the change on Dat...
Jing Tao
04:56 PM Bug #4866: The date displaying on Workflow Run Schedule is incorrect
This is a tricky bug.
The problem is on the DateUtil class of the utilities module. When scheduler transforms a Time...
Jing Tao

03/04/2010

05:44 PM Bug #4850: Get the new TPC scheduler working with the new changes in Kepler from the KarXmlGenerator
I just scheduled a tpc-09 workflow. It works. So the bug can be closed. Jing Tao

03/03/2010

03:54 PM Bug #4837: Permission error when ESA moderator attempts to modify a document
added the group information to the return xml for the metacat api getloggedinuserinfo call. Use that information to ... Michael Daigle
03:33 PM Bug #4866 (Resolved): The date displaying on Workflow Run Schedule is incorrect
I tried to schedule a workflow run on the scheduler interface. The start time is 03/03/2010 15:30:00 and end time is ... Jing Tao

03/02/2010

02:11 PM Bug #4862 (Closed): NCEAS registry form now creates access rules for extra parties
In the past, EML documents created using the NCEAS registry form were written with the following automatic access rul... Jim Regetz
12:20 PM Bug #4850: Get the new TPC scheduler working with the new changes in Kepler from the KarXmlGenerator
After changing the query format and result set style sheet, the tpc workflow and workflowRun search works. The every ... Jing Tao
04:15 PM Bug #4839: Fix URL in "revision notification" email sent to ESA moderators
Removed the urls in moderator and user emails and instead put in a link to the server and instructions how to view th... Michael Daigle
04:14 PM Bug #4835: ESA review comments don't appear to users when viewing their documents
The setaccess api in metacat was not correctly parsing the access rules, so permissions for the revision document wer... Michael Daigle

02/26/2010

03:41 PM Bug #4691: Registry mixes up users when saving
(In reply to comment #1)
> All data entered into the 'data set owner' fields should be copied to a
> //creator elemen...
Jim Regetz
02:39 PM Bug #4691: Registry mixes up users when saving
Definitely fix in 1.9.2 Michael Daigle
03:14 PM Bug #4850: Get the new TPC scheduler working with the new changes in Kepler from the KarXmlGenerator
adding kepler bug dependency ben leinfelder
02:59 PM Bug #4850: Get the new TPC scheduler working with the new changes in Kepler from the KarXmlGenerator
I'm in the process of adding tpcStatus in the KarEntryAttributes such that it should look like this:
<karEntryAttrib...
ben leinfelder
10:36 AM Bug #4850 (Resolved): Get the new TPC scheduler working with the new changes in Kepler from the KarXmlGenerator
On kepler side, the metadata format to describe the workflow kar file and workflow run files was changed. So TPC sche... Jing Tao
03:05 PM Bug #4841: Review page for new data registration omits spatial/temporal info
fix in 1.9.2 Michael Daigle
03:04 PM Bug #4838: Permissions error for link contained in Data Set Citation section
fix in 1.9.2 Michael Daigle
03:00 PM Bug #4837: Permission error when ESA moderator attempts to modify a document
Fix in 1.9.2.
All rules in the doc should apply.
Michael Daigle
11:24 AM Bug #4837: Permission error when ESA moderator attempts to modify a document
FYI, this is more than just a esa-moderators permission issue. Here is another case:
Currently on esa-dev, document ...
Jim Regetz
02:48 PM Bug #4835: ESA review comments don't appear to users when viewing their documents
Fix in 1.9.2 Michael Daigle
02:44 PM Bug #4834: Request to modify document redirects to registry home after login
try to fix in 1.9.2 Michael Daigle
02:35 PM Bug #4130: data tables in KNB display dataTable->physical->objectName
Try to get this into the 1.9.2 release if possible. Michael Daigle

02/25/2010

03:04 PM Bug #4130: data tables in KNB display dataTable->physical->objectName
Yes, this should be changed. The current behavior is especially problematic for data packages that separately describ... Jim Regetz
02:12 PM Bug #4691: Registry mixes up users when saving
Further details: Other than the first and last name fields, none of the fields from the section "PRINCIPAL DATA SET ... Shaun Walbridge
04:55 PM Revision 5244 (metacat): Fix two issues: Remove State from 'Data Set Contact' section of confirmation form (part of #3922), and make sure when editing a document that email addresses are picked up appropriately (capitalization).
Jing Tao
04:53 PM Bug #4843 (New): ESA registry: Remove 'station' default value from Organization Name
In the ESA registration form, the Organization Name field under Basic Information is prepopulated with the value 'sta... Jim Regetz
04:46 PM Bug #4842 (Resolved): ESA moderators should receive email notification of document revisions
A notification should be sent to the ESA moderators list (but probably not to the document owner? no point...) whenev... Jim Regetz
04:46 PM Bug #3922: Registry inserts "Select state or territory here." as default value
Looks like this was handled. No longer an issue. Michael Daigle

02/24/2010

03:57 PM Bug #4841 (Resolved): Review page for new data registration omits spatial/temporal info
Both for the ESA and NCEAS data registries, information entered in the temporal coverage and spatial coverage section... Jim Regetz
03:50 PM Bug #4840 (New): When registering, U.S. State/Territory of owner is also applied to contact
When registering a new data set, dropdown menus for "U.S. State or Territory" appear both in the Principal Data Set O... Jim Regetz
02:33 PM Bug #4839 (Resolved): Fix URL in "revision notification" email sent to ESA moderators
The "revise document" notification that gets sent to ESA moderators after requesting a revision contains a URL like t... Jim Regetz
02:24 PM Bug #4838 (Resolved): Permissions error for link contained in Data Set Citation section
It's easiest to describe this by documenting the steps to reproduce. This involves ESA, but I haven't checked whether... Jim Regetz
02:11 PM Bug #4837 (Resolved): Permission error when ESA moderator attempts to modify a document
The "Revise document" notification emailed to moderators currently contains a URL that looks something like this:
...
Jim Regetz
01:48 PM Bug #4835 (Resolved): ESA review comments don't appear to users when viewing their documents
After the moderator enters review comments and sends a document back for revision, those comments are visible to the ... Jim Regetz
01:39 PM Bug #4834 (Resolved): Request to modify document redirects to registry home after login
The "Revise document" notification emailed to document submitters currently contains a URL that looks something like ... Jim Regetz

02/23/2010

03:44 PM Bug #4818: ESA does not send an email to moderators when new document is added via registry
resolved Michael Daigle
03:43 PM Bug #4818: ESA does not send an email to moderators when new document is added via registry
Added code to send email to both moderator and user when a document is added/modified via the esa registry. Michael Daigle

02/22/2010

09:50 AM Bug #4818 (Resolved): ESA does not send an email to moderators when new document is added via registry
The register-dataset.cgi does not send an email when a new document is created via the ESA skin. It used to, and sti... Michael Daigle
09:47 AM Bug #4787: User having WRITE permission couldn't update a document
There was a white space issue when comparing database access rules to doc access rules. Trimmed the values before co... Michael Daigle
 

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