From 02/28/2010 to 03/29/2010


12:50 PM Bug #4907 (Resolved): Replication error stops insert/update of valid EML document
It appears that a replication error causes insert/update to fail that would otherwise succeed:
On March 26, 2010, ...
Duane Costa


10:46 PM Bug #4904 (Resolved): NCEAS Projects list is missing from registry form dropdown
On the NCEAS data registry form, the dropdown menu for "NCEAS Project(s)" only has a small number of what appear to b... Jim Regetz


12:41 AM Revision 5295 (metacat): Modified the build.xml to include a new task for building the dataone
service api package, which generates a jar file that is put into lib. This
task depends on maven being installed in ...
Matt Jones


08:37 PM Revision 5294 (metacat): Updated the build to properly locate the servlet jar depending on which
version of tomcat is being used, tomcat5 or tomcat6. Matt Jones
01:28 PM Bug #4900: LDAP referral connection timeout
added code to skip the referral and continue to the next one if there was a problem with the first referral. This all... ben leinfelder
11:22 AM Bug #4900: LDAP referral connection timeout
matt's suggestions
2) modify metacat to gracefully deal with referral failures and timeouts
3) modify metacat to quer...
ben leinfelder
11:12 AM Bug #4900: LDAP referral connection timeout
This came to light when Judith and Victoria were trying to authenticate with the saeonocean metacat node (that points... ben leinfelder
11:09 AM Bug #4900 (Resolved): LDAP referral connection timeout
When trying to authenticate with a SANParks username from Metacat hosts that point to, the au... ben leinfelder
01:13 PM Revision 5293 (metacat): when looking up group membership, skip referrals that have errors ben leinfelder
12:56 PM Revision 5292 (metacat): skip referrals that have errors (connection timeout, host down, etc) ben leinfelder


08:55 PM Revision 5291 (metacat): Refactored putObject method to separate the create() and update() portions in order to match the method signatures needed for DataONE.
Matt Jones


09:16 AM Bug #4691: Registry mixes up users when saving
Fixed the reference to the contact Fax number that was showing up in the creator section. Michael Daigle
09:15 AM Bug #4838: Permissions error for link contained in Data Set Citation section
I changed the link results to display in the top window. This displays a straight read action for the document, whic... Michael Daigle


11:33 AM Bug #4892 (New): ESA registry shouldn't allow accepted docs to be modified
As submitter of an ESA document, I was able to modify the doc *after* it was accepted by the moderator, which I belie... Jim Regetz
11:20 AM Bug #4838: Permissions error for link contained in Data Set Citation section
Yep, the permissions problem is fixed. However, now when clicking the link, the frame that contains the doc is replac... Jim Regetz
10:09 AM Bug #4691: Registry mixes up users when saving
As tested on esa-dev: The FAX number provided in the contact section is still going into both the creator and contact... Jim Regetz
04:02 AM Revision 5287 (metacat): Modified ResourceHandler.deleteObject() to take a globally unique id (guid)
as input rather than a metacat-conformant docid. The guid is translated
into a metacat docid which is then used in t...
Matt Jones
03:11 AM Revision 5286 (metacat): Added support to ResourceHandler to allow the putObject method to use
arbitrary guid strings as input. These strings are examined, and if they
match the Metacat docid format (
Matt Jones
03:06 AM Revision 5285 (metacat): Adding a new property to be used as an identifier prefix by default.
Matt Jones


11:27 PM Revision 5284 (metacat): Updated MetacatRestClientTest so that the tests are actually calling fail()
when errors occur, and fixed all sixteen tests so that they run successfully
and can be run from any client (i.e., th...
Matt Jones
11:22 PM Revision 5283 (metacat): Fixed bug in getNextRevision() where "error" documents were not being
detected properly before searching for the next identifier. Matt Jones
06:54 PM Revision 5282 (metacat): Added initial support for arbitrary string identifiers in metacat (referred to as a guid). The new identifier table is used to map arbitrary string identifiers to Metacat's current docid format (referred to as the localId). Added a new IdentifierManager class to manage this table, adding new mappings as objects are added to the system. Modified the MetacatTest service to utilize this mapping table to look up a localId from a guid. IdentiferManagerTest is working with these guids now, as is the MetacatTest service get() method, but other parts of the system are unaware of them (e.g., create, update, delete operations are unaware, and no mapping is created when new documents are created). As a consequence, the MetacatRestClientTest is not working (although it also had lots of hardcoded dependencies that need to be fixed as well).
Matt Jones
03:29 PM Bug #4130: data tables in KNB display dataTable->physical->objectName
Changed the xsl to only use the entityName Michael Daigle
01:33 PM Bug #4886 (New): "DatabaseService is already registered" error after configuring Metacat
I installed Metacat from 1.9.2 branch and configured it successfully. Then I typed
the url on the browser:
Jing Tao


01:40 PM Bug #4130: data tables in KNB display dataTable->physical->objectName
(In reply to comment #4)
> In my opinion, entityName is a lot lett predictable than objectName. In
> morpho, the use...
Jim Regetz
02:12 AM Revision 5277 (metacat): Added copyright, license, and class documentation.
Matt Jones
12:33 AM Revision 5276 (metacat): Modified table structure to change identifiers table (previously unused) to
represent a mapping between arbitrary string identifiers and metacat docids.
More information in https://trac.dataone...
Matt Jones


01:23 PM Bug #4130: data tables in KNB display dataTable->physical->objectName
I think you should talk this over with Mark -- he was the one who made the strong case for using objectName, an...
Matt Jones
12:32 PM Bug #4130: data tables in KNB display dataTable->physical->objectName
It turns out showing both names looks a little odd when they are identical (which is usually the case), and potential... Jim Regetz


01:15 PM Bug #4834: Request to modify document redirects to registry home after login
After system installation and configuration, the admin user remains logged in. This seems to confuse the registry co... Michael Daigle


02:55 PM Bug #4841: Review page for new data registration omits spatial/temporal info
The confirmData.tmpl script was looking at module.temporal and module.spatial properties from These ... Michael Daigle
01:14 PM Bug #4691: Registry mixes up users when saving
Added a separate method in register-dataset.cgi to create a creator section in the document that is different from th... Michael Daigle


09:28 AM Bug #4871: Need a new tag for utilities module on Metacat 1.9.2 release
Created UTILITIES_1_0_1 tag and updated metacat build.xml to use this tag. Michael Daigle


10:49 PM Revision 5268 (metacat): Fixed typos in metacat documentation.
Matt Jones
09:39 PM Revision 5267 (metacat): Removed version as not sure when this will be delivered, so be agnostic.
Matt Jones
07:31 PM Revision 5266 (metacat): Adding new documentation section for Metacat design documents in Sphinx/ReStructured Text format. Build this documentation using the
provided Makefile, assuming that both Sphinx and PlantUML are installed and on the local executable path by running '... Matt Jones
03:31 PM Bug #4838: Permissions error for link contained in Data Set Citation section
Added the session Id to the read url and it works. Michael Daigle


05:02 PM Bug #4871 (Resolved): Need a new tag for utilities module on Metacat 1.9.2 release
I just fixed bug 4866.
This fix involves the change on Dat...
Jing Tao
04:56 PM Bug #4866: The date displaying on Workflow Run Schedule is incorrect
This is a tricky bug.
The problem is on the DateUtil class of the utilities module. When scheduler transforms a Time...
Jing Tao


05:44 PM Bug #4850: Get the new TPC scheduler working with the new changes in Kepler from the KarXmlGenerator
I just scheduled a tpc-09 workflow. It works. So the bug can be closed. Jing Tao
03:54 PM Bug #4837: Permission error when ESA moderator attempts to modify a document
added the group information to the return xml for the metacat api getloggedinuserinfo call. Use that information to ... Michael Daigle
03:33 PM Bug #4866 (Resolved): The date displaying on Workflow Run Schedule is incorrect
I tried to schedule a workflow run on the scheduler interface. The start time is 03/03/2010 15:30:00 and end time is ... Jing Tao


02:11 PM Bug #4862 (Closed): NCEAS registry form now creates access rules for extra parties
In the past, EML documents created using the NCEAS registry form were written with the following automatic access rul... Jim Regetz
12:20 PM Bug #4850: Get the new TPC scheduler working with the new changes in Kepler from the KarXmlGenerator
After changing the query format and result set style sheet, the tpc workflow and workflowRun search works. The every ... Jing Tao


04:15 PM Bug #4839: Fix URL in "revision notification" email sent to ESA moderators
Removed the urls in moderator and user emails and instead put in a link to the server and instructions how to view th... Michael Daigle
04:14 PM Bug #4835: ESA review comments don't appear to users when viewing their documents
The setaccess api in metacat was not correctly parsing the access rules, so permissions for the revision document wer... Michael Daigle

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