Activity
From 08/20/2013 to 09/18/2013
09/18/2013
- 04:09 PM Revision 8243 (metacat): Adding a protocol to the <link href=""> for the external CSS
- 03:50 PM Task #6095 (Closed): Pull metacatui from specific tag
- added to build, but still pointing to 'master' for the time being.
- 03:17 PM Task #6095 (Closed): Pull metacatui from specific tag
- Right now it is pulling the HEAD for the build. Should pull a specific tag.
- 03:50 PM Revision 8242 (metacat): pull a specific tag/branch form git when needed for metacatui.war
- https://projects.ecoinformatics.org/ecoinfo/issues/6095
- 03:48 PM Revision 8241 (metacat): add anchor for plugin handlers property
- 03:37 PM Revision 8240 (metacat): Pull the external stylesheets in by <link> rather than @import for faster page load
- 03:15 PM Revision 8239 (metacat): Edit some of the instructions for activating an account. https://projects.ecoinformatics.org/ecoinfo/issues/6063
- 03:08 PM Revision 8238 (metacat): Edit some of the instructions for registering an account. https://projects.ecoinformatics.org/ecoinfo/issues/6063
- 03:07 PM Revision 8237 (metacat): add lookupname link to the login form. https://projects.ecoinformatics.org/ecoinfo/issues/2635
- 02:56 PM Revision 8236 (metacat): clone metacatui into a non-build directory so that it doesn't have to be recloned for every build.
- 02:01 PM Revision 8235 (metacat): Remove the words relative to knb.
- 01:23 PM Revision 8234 (metacat): Remove the knb information in the emails.
- 01:21 PM Revision 8233 (metacat): Add a link for forgot password in the loginForm.
- Remove the words with specific knb.
- 11:22 AM Revision 8232 (metacat): Simplified the importing of images and stylesheets so that both /admin and /docs pull from /docs
- 10:28 AM Revision 8231 (metacat): Made some CSS changes to the "Go" button in the docs because it was off by a few pixels in three different browsers. Also changed the admin config landing page links to look like buttons
- 09:58 AM Revision 8230 (metacat): add documentation entries for fields that appear on the main metacat admin page.
- 09:04 AM Bug #6094 (Closed): Replace all screenshot images in the documentation with screenshots of the new documentation style
09/17/2013
- 05:02 PM Revision 8229 (metacat): Add code to handle the looking up names.
- 04:53 PM Revision 8228 (metacat): Add two peroperties for the templates of looking up user name.
- 04:50 PM Revision 8227 (metacat): Add a template to handle the success of looking up the username.
- 04:49 PM Revision 8226 (metacat): Add a tempalte for users to look up the forgotten username.
- 04:33 PM Revision 8225 (metacat): Imported FontAwesome after Bootstrap for the FontAwesome icons. Also added a white version of the metacat logo.
- 04:33 PM Revision 8224 (metacat): redirect to the configured metacatui context (ui.context in metacat.properties file). this in conjunction with choosing "metacatui" as the default skin in the metacat admin interface will redirect requests to the metacat context (e.g., /knb) to the ui context (e.g., /metacatui). https://projects.ecoinformatics.org/ecoinfo/issues/6062
- 04:32 PM Revision 8223 (metacat): prep for 2.2.0 release. include configuration value for metacatui deployment context.
- 04:19 PM Feature #6080 (Feedback): Update Metacat admin screen using cues from the new default look and feel
- "wow" factor has been upped. :)
Pulled in more styling from the metacatUI default theme so the config pages have a... - 10:40 AM Feature #6080 (In Progress): Update Metacat admin screen using cues from the new default look and feel
- Via Ben, I'm upping the 'wow' factor
- 04:17 PM Revision 8222 (metacat): Matched the admin config pages to the default metacatUI theme. Changed the background image of the docs and config pages to a big cat for some metacat branding.
- 03:22 PM Revision 8221 (metacat): Add a method to lookup users'account for the people who forgot their user name.
- 10:36 AM Revision 8220 (metacat): Add code to generate dc=tmp. Clean up some code.
- 10:20 AM Revision 8219 (metacat): bring the "Go" button down one more pixel to align with the search field.
- 09:58 AM Revision 8218 (metacat): Added a dark gray version of the metacat logo for the new configuration page styles
- 09:35 AM Feature #6092 (Closed): Science Metadata DOIs should point to "view" landing page
- Added two optional entries in metacat.properties for including a template for the view landing page:...
09/16/2013
- 09:58 PM Revision 8217 (metacat): Remove a reistriction that it didn't show the similar accounts of "ou=Account" in the user registration.
- 09:45 PM Revision 8216 (metacat): Use the specific template for the verification.
- 09:44 PM Revision 8215 (metacat): Add information about the activation email.
- 05:43 PM Revision 8214 (metacat): Add the new properties to access the verification templates.
- 05:41 PM Revision 8213 (metacat): Add a new template to handle the success of the email verification.
- 05:40 PM Revision 8212 (metacat): Add a new template to handle the failure during the email verification.
- 05:00 PM Revision 8211 (metacat): Fixed a bug that email verificaton doesn't work well on "ou=Account".
- 04:34 PM Bug #6086 (Feedback): publish service call fails to authenticate properly
- Now requiring authentication (session) to generate an identifier. Not reserving it with the CN at this point.
- 03:49 PM Bug #6086: publish service call fails to authenticate properly
- Added the dataone.subject to the list of metacat admins. This identity will enjoy the perks of being an admin when ac...
- 02:34 PM Bug #6086: publish service call fails to authenticate properly
- Part of the issue was not running under SSL. Fixing that, the correct update() command would be:...
- 04:33 PM Revision 8210 (metacat): require authenticated session when minting a DOI/other identifier. https://projects.ecoinformatics.org/ecoinfo/issues/6086
- 04:19 PM Revision 8209 (metacat): test that d1 node admin is allowed all permissions. https://projects.ecoinformatics.org/ecoinfo/issues/6086
- 03:47 PM Revision 8208 (metacat): include the dataone.subject (node admin) in the list of administrators. This allows full administrative access to objects when using certificates+d1 api. https://projects.ecoinformatics.org/ecoinfo/issues/6086
- 03:16 PM Revision 8207 (metacat): Fixed a bug to split the organization list from a property file.
- Fixed a bug to use a wrong object class for the ou.
- 02:31 PM Revision 8206 (metacat): Pass a organization list to the template.
- 02:29 PM Revision 8205 (metacat): replace the hard-coded organization list.
- 02:22 PM Revision 8204 (metacat): test for configured target url template on metadata using the default #view url. https://projects.ecoinformatics.org/ecoinfo/issues/6092
- 01:42 PM Feature #6080 (Closed): Update Metacat admin screen using cues from the new default look and feel
- Configuration pages have new CSS and the HTML was updated a bit so it now fits in with the default metacatUI theme.
- 01:41 PM Revision 8203 (metacat): Redesigned the /admin configuration pages to better match our new MetacatUI design. Looks good in both /context/admin view and the #external view using metacatUI
- 12:00 PM Revision 8202 (metacat): use optional template for registering DOIs at a given target. https://projects.ecoinformatics.org/ecoinfo/issues/6092
- 11:14 AM Feature #6092 (Closed): Science Metadata DOIs should point to "view" landing page
- We'll use a configurable template for the URI in metacat.properties that will allow us flexibility in determining wha...
- 10:32 AM Revision 8201 (metacat): Add code to get organization information from the ldapconfig.
09/13/2013
- 03:58 PM Bug #6061 (Closed): Ensure that all packages from metacat API have resource map
- Now generating OREs when Metacat API is used to insert science metadata.
Also added a better check for existing OR... - 03:53 PM Revision 8200 (metacat): only attempt to generate OREs for objects that we know not to have them already. https://projects.ecoinformatics.org/ecoinfo/issues/6061
- 03:46 PM Revision 8199 (metacat): Add a new property to control showing the organization list.
- 03:45 PM Revision 8198 (metacat): Add a new property ldap.template.organizationList to control the list of the organization in the ldap templates.
- It can be overwitten by the skin property with the same name.
Also add the Account organization. - 03:01 PM Revision 8197 (metacat): First get the email sender from the skin properties. If it is null, get it from the metacat.properties file.
- 02:11 PM Revision 8196 (metacat): A few style changes to the docs
- 01:30 PM Revision 8195 (metacat): Remove the sentence which saied the failure reason is the uid has been used.
- 01:25 PM Revision 8194 (metacat): Reword a message for the failed verification.
- 11:12 AM Revision 8193 (metacat): Generate an ORE when sci metadata is added via the Metacat API.
- https://projects.ecoinformatics.org/ecoinfo/issues/6061
- 10:02 AM Revision 8192 (metacat): Added an ID and div wrapper to the docs html for more precise CSS selectors in the metacatui ExternalView.
09/12/2013
- 05:12 PM Revision 8191 (metacat): Add code to handle the failure of the email server.
- 04:50 PM Revision 8190 (metacat): better checking for ORE maps when publishing DOIs (need to update the packages that contain sci meta). https://projects.ecoinformatics.org/ecoinfo/issues/6061
- 01:45 PM Revision 8189 (metacat): implement ORE check method to actually query the MN for OREs that reference the given pid.
- https://projects.ecoinformatics.org/ecoinfo/issues/6061
- 11:25 AM Feature #6075 (Closed): Modify Metacat admin documentation so that it uses the chosen theme in the browser
- It won't be possible to view the docs in a theme before configuration, so I created a new Sphinx theme to mirror the ...
- 11:19 AM Revision 8188 (metacat): Added a Sphinx theme for the documentation that mirrors the new default theme for MetacatUI.
- https://projects.ecoinformatics.org/ecoinfo/issues/6075
- 10:48 AM Feature #6089 (Closed): Remove index_event record when reindex is successful
- Now calling the event log remove() method for all successful reindex attempts.
- 10:43 AM Feature #6089 (In Progress): Remove index_event record when reindex is successful
- I think this will be useful, especially for cases like what Mike Frenock is experiencing - manually reindexing items ...
- 10:45 AM Revision 8187 (metacat): remove any index event errors if the pid has successfully been reindexed. https://projects.ecoinformatics.org/ecoinfo/issues/6089
09/11/2013
- 09:57 PM Revision 8186 (metacat): Add code to check if password match in the registeration.
- 09:36 PM Revision 8185 (metacat): Add the new feature for the email verification.
- 10:59 AM Revision 8184 (metacat): change hazelcast group name to match the current context. https://projects.ecoinformatics.org/ecoinfo/issues/5624
- 10:49 AM Revision 8183 (metacat): try to cut down on the number of metacat-ui build calls - the SEEK build ends up calling war target more oftenthan not!
- 10:13 AM Feature #6089 (Closed): Remove index_event record when reindex is successful
- If manually reindexing a pid that had an error, we should remove the record (if it exists) from the index_event table...
- 09:28 AM Revision 8182 (metacat): Fixed a bug that the url link was not correct in the email.
09/10/2013
- 11:03 PM Revision 8181 (metacat): Send the verification email.
- 05:58 PM Revision 8180 (metacat): Add code to add a user to the tmp subtree.
- 04:19 PM Bug #2646 (Closed): allow eml to specify any valid user as access constraint
- This is supported in DataONE using the access rule conventions specified there, notably, "authenticatedUser"
http:... - 04:16 PM Bug #129 (Closed): Metacat Performance: paged Query Returns
- Now using SOLR as the search mechanism which absolutely supports paged results.
- 03:49 PM Task #2635: Look up for forgotten KNB account names
- Might consider this feature to be added to the ldapweb.cgi while it is being extended.
- 03:46 PM Bug #1311 (Closed): Registry: Links should open in a new window and windows should move to front
- This is no longer and issue with the guide because we are using it inside the metacatui pulled into a modal "help" ov...
- 03:43 PM Bug #5243: ldapweb.cgi crashes with invalid password characters
- Jing - would be great if we can check for some special characters and fail gracefully if their password uses ones tha...
- 03:40 PM Bug #3761 (Closed): Add ability for admin user to log out
- added action=logout link to header and footer
- 03:40 PM Revision 8179 (metacat): add logout links to header and footer. https://projects.ecoinformatics.org/ecoinfo/issues/3761
- 03:34 PM Task #3306: NCEAS skin account creation needs more thought
- When working on the LDAP web interface, we should keep this in mind -- the templates should be as generic as possible...
- 03:31 PM Bug #3395 (Closed): allow private access via indexed "shortcut" url
- This is essentially supported by the D1 REST service now - both using client certs or JSESSIONID cookies.
- 03:29 PM Bug #4085 (Rejected): The session couldn't be kept after login through devtools.html
- now using JSESSIONID cookies when you leave the sessionid off the query string
- 03:25 PM Bug #3021 (Rejected): ldapweb.cgi needs some usability improvements
- Actually, login is handled by the registry, not ldapweb.cgi. Redirects would be nice, but it is possible to "trick" i...
- 03:20 PM Bug #5647 (Closed): Lack of access rights for "previous" datafile prevent saving
- Now checking the current and the previous revisions - if either allows updates, then the action proceeds successfully...
- 03:17 PM Revision 8178 (metacat): check both previous and current data revisions when updating packages. https://projects.ecoinformatics.org/ecoinfo/issues/5647
- 12:18 PM Revision 8177 (metacat): Fixed a bug in creating a subtree.
- 07:52 AM Revision 8176 (metacat): Add code to generate temporary subtree if it didn't exist.
09/09/2013
- 05:55 PM Revision 8175 (metacat): add a new subroutine to create a temporary account.
- 03:34 PM Bug #5647: Lack of access rights for "previous" datafile prevent saving
- Sarah Clark has also seen this behavior, but in a slightly different scenario. Instead of an any EML parsing error, t...
- 03:30 PM Bug #6054 (Closed): dataPackage.xxxx.zip BagIt package is unzipped as "bag"
- 03:30 PM Story #6064 (Closed): Metacat bundle packaging
- 03:28 PM Task #6088 (Closed): Update documentation to use new context name
- 03:26 PM Task #6087 (Closed): Change all default configurations to use new context
- 03:11 PM Bug #6086: publish service call fails to authenticate properly
- I should also mention that you should not call publish() on the KNB until Metacat 2.1.1 is installed since there is a...
- 08:22 AM Bug #6086 (In Progress): publish service call fails to authenticate properly
- Well, for the first issue, you cannot expect a client certificate to work if you aren't using https. If the URL in th...
- 03:07 PM Task #6081 (Closed): Build metacatui.war in Metacat bundle
- 03:05 PM Task #6069 (Closed): Pull metacatui from public Git repo into Metacat
- 03:05 PM Revision 8174 (metacat): include metacatui.war in the Metacat distribution. https://projects.ecoinformatics.org/ecoinfo/issues/6064
09/06/2013
- 04:45 PM Bug #6086 (Closed): publish service call fails to authenticate properly
- I was trying to issue a DOI for Sarah Olson's data set tonight via curl on the KNB using the KNB node certificate as ...
- 02:26 PM Bug #6085 (Closed): SQL error when inserting EML beta2 access document
- 02:23 PM Bug #6085 (Closed): SQL error when inserting EML beta2 access document
- I was showing Lauren how to use the perl lib to transfer test content from one Metacat to her localhost and we got th...
- 02:22 PM Revision 8173 (metacat): avoid SQL errors when processing very old objects of type: "-//ecoinformatics.org//eml-access-2.0.0beta6//EN"
- 12:46 PM Bug #5812 (Closed): Rework default skin[s] to use SOLR query
- This has been superseded by metacatUI work.
- 12:45 PM Feature #6075: Modify Metacat admin documentation so that it uses the chosen theme in the browser
- This strongly overlaps with the task in metacatUI. Both projects may need to be modified to fully support this.
- 10:07 AM Feature #6075 (Closed): Modify Metacat admin documentation so that it uses the chosen theme in the browser
- 12:41 PM Story #6082 (Closed): Rename knb.war to ???.war
- Possible names (please add more suggestions):
-metacat.war (would make <hostname>/metacat/metacat for the Metacat se... - 12:38 PM Story #6064: Metacat bundle packaging
- Tracking for potential modifications to the binary distribution of Metacat to include:
server (knb.war)
indexing (... - 12:36 PM Task #6081 (Closed): Build metacatui.war in Metacat bundle
- 12:35 PM Task #6068 (Closed): Update Metacat skin admin screen
- Added note to the skin configuration screen and made the screen configured by default for an initial deployment of kn...
- 12:34 PM Revision 8172 (metacat): mark skin configuration as being complete by default so as to encourage use of metacatUI. https://projects.ecoinformatics.org/ecoinfo/issues/6068
- 12:15 PM Revision 8171 (metacat): add note about new metacatUI themes to the skin config page. https://projects.ecoinformatics.org/ecoinfo/issues/6068
- 12:01 PM Revision 8170 (metacat): Display the recaptcha on the register stage.
- 11:59 AM Feature #6080: Update Metacat admin screen using cues from the new default look and feel
- Talked this over with Lauren and we think it will be relatively quick to apply the new default look and feel to the a...
- 11:57 AM Feature #6080 (Closed): Update Metacat admin screen using cues from the new default look and feel
- The header and footer sections will not have the same exact links as the default theme because this is targeting admi...
- 10:21 AM Feature #6077 (Rejected): Include new instructions for modifying themes in the Metacat admin documentation
- 10:08 AM Feature #6077 (Rejected): Include new instructions for modifying themes in the Metacat admin documentation
- 07:53 AM Revision 8169 (metacat): Read the recaptcha key from the metacat.properties.
- 07:36 AM Revision 8168 (metacat): Add two new properties to store the recaptcha public key and private key.
09/05/2013
- 05:11 PM Task #6069 (Closed): Pull metacatui from public Git repo into Metacat
- Since the original nceas staff repo for datadepot is protected (even for reading) we need to push the release tags to...
- 05:00 PM Task #6068 (Closed): Update Metacat skin admin screen
- It should have a note about the new metacatUI method and should be marked as already configured (default) so that no ...
- 04:59 PM Revision 8167 (metacat): Add the recaptcha protection.
- 04:58 PM Revision 8166 (metacat): Add the recaptcha protection.
- 04:45 PM Task #6067 (Closed): Update documentation to reflect the new metacatui theme mechanism
- 04:43 PM Task #6066 (Closed): Add email verification for new accounts
- We should send a temporary link to activate an account using on a randomly-generated key for their provisional accoun...
- 04:38 PM Task #6065 (Closed): Add reCaptcha widget to initial registration page
- 04:34 PM Story #6064 (Closed): Metacat bundle packaging
- 04:33 PM Story #6063 (Closed): ldapweb.cgi enhancements
- 04:32 PM Story #6062 (Closed): Deprecate skin configuration
09/04/2013
- 11:54 AM Bug #6061 (In Progress): Ensure that all packages from metacat API have resource map
- Yesterday I ran the "Generate ORE" action for KNB's holdings. After a while I got a nagios warning that the server wa...
09/03/2013
- 09:26 AM Bug #6061: Ensure that all packages from metacat API have resource map
- Originally, we decided that the old Metacat API would not generate ORE objects for new content coming into the system...
09/02/2013
- 11:03 AM Bug #6061 (Closed): Ensure that all packages from metacat API have resource map
Data package downloads no longer have data files in them, even when the data are present in Metacat via an upload f...
08/27/2013
- 02:39 PM Feature #6033 (Resolved): Add configuration to disable 'pathquery'
- In the metacat.properties file, there is a property:
dbquery.enabledEngines=pathquery;solr
If the "pathquery" i... - 11:19 AM Revision 8165 (metacat): set the timed index interval to be 12 hours.
08/26/2013
- 04:30 PM Revision 8164 (metacat): If the pathquery engine is disabled, the xml path index queue will be disabled as well.
- 11:50 AM Revision 8163 (metacat): If the xpath query is disabled, the query, squery and spatial_query action will be disabled as well.
08/23/2013
- 04:01 PM Revision 8162 (metacat): Add code to throw an exception if the pathquery is not enabled.
- We also need to disable building index if the pathquery is disabled.
- 02:45 PM Bug #6057 (Closed): Publish DOI action does not update revision history correctly
- Now fixed in the 2.1.1 release.
- 02:44 PM Bug #6057 (Closed): Publish DOI action does not update revision history correctly
- System metadata was not correctly duplicated for the new object (using the DOI) and the revision history suffered.
- 11:39 AM Revision 8161 (metacat): Change the parameters order of the constructor. We maybe reuse some code from d1_cn_processor.
08/22/2013
- 04:06 PM Bug #6054 (Feedback): dataPackage.xxxx.zip BagIt package is unzipped as "bag"
- Now using file names like:...
- 03:38 PM Bug #6054 (Closed): dataPackage.xxxx.zip BagIt package is unzipped as "bag"
- It should be "dataPackage" or a mangled version of the PID
- 04:04 PM Revision 8160 (metacat): use consistent file names and zip content names. Opted for "-" separator so that the zip writer does not remove the unique part of the filename. https://projects.ecoinformatics.org/ecoinfo/issues/6054
- 03:52 PM Revision 8159 (metacat): Change the solr-home directory location for the testing.
- 03:51 PM Revision 8158 (metacat): Not include the solr-home in the jar file.
- 12:21 PM Feature #6031: Add rendered metadata to Bagit package contents
- I was just moving it out of the 1.0.0 MetacatUI version so it didn't get lost. Moving to metacat as Ben indicated.
- 12:11 PM Feature #6031: Add rendered metadata to Bagit package contents
- This is a Metacat feature and would need to be coded in the MN.package() method.
- 12:16 PM Bug #6053: Include rendered Metadata in Bagit content
- TBD:
-What format should the Metadata be in: PDF or HTML?
-What L+F/branding would be included or not?
-Would eith... - 12:12 PM Bug #6053 (Closed): Include rendered Metadata in Bagit content
08/21/2013
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