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From 12/26/2010 to 01/24/2011

01/24/2011

02:37 PM Bug #5274: Trying to schedule workflow with report layout puts up prompt about no report layout
The problem is when kepler evaluated the type in a kar entry, it used "equals" "ReportLayout". When we uses "contains... Jing Tao
02:21 PM Bug #5276 (New): component search performance is poor
Searching for remote KARs through the Components pane is very slow -- search downloads and deals with karXML, each ge... Derik Barseghian
02:10 PM Bug #5248: downloading non-public kars from Search Components doesn't work
Discussed with Matt, I'll take this one. Derik Barseghian
10:29 AM Bug #4324: ptII/module-info/revision.txt not being updated
I also added the same information as above to the Kepler Project wiki: https://kepler-project.org/developers/referenc... Sean Riddle
10:25 AM Bug #4324: ptII/module-info/revision.txt not being updated
A cron job has been started on lore.genomecenter.ucdavis.edu to run 'ant validate-ptolemy' every midnight. The revisi... Sean Riddle

01/21/2011

01:07 PM Bug #5275: Executing sensor-view workflow records provenance
Works. On import provenance turns off, and attempting to turn it back on, even during execution of sensor workflow, i... Derik Barseghian
12:34 PM Bug #5275: Executing sensor-view workflow records provenance
Should be fixed. Derik, please check. Daniel Crawl

01/20/2011

09:11 PM Bug #5248: downloading non-public kars from Search Components doesn't work
A) I don't believe it makes sense to have non-public entries showing up in the public searches. I can see how this er... ben leinfelder
06:07 PM Bug #5248: downloading non-public kars from Search Components doesn't work
My changes in r26708 are probably worth looking at when looking at this bug. Derik Barseghian

01/19/2011

03:37 PM Bug #5275 (Resolved): Executing sensor-view workflow records provenance
Executing a sensor view workflow isn't supposed to record data to provenance because the director is DE.
Replicate...
Derik Barseghian
03:01 PM Bug #5153: Save As... closes all windows associated with a workflow
Pushing further investigation on this enhancement to 2.3. As reported by Aaron, this does not appear to be a current ... David Welker
01:08 PM Bug #5263: failure to restart after upgrade from 2.0 to 2.1
Added documentation. This should not be a problem going forward, due to a change in how the module manager works. David Welker
12:44 PM Bug #4801: out of memory
Postponing to 2.3. David Welker
12:43 PM Bug #5249: test kepler for memory leaks
Postponing to 2.3. David Welker
12:43 PM Bug #4642: memory usage & slowdowns
Postponing to 2.3. David Welker
12:41 PM Bug #5258: kepler start exception when soft links are in KeplerData/workflows/MyWorkflows
Since this is an obscure problem that isn't likely to occur in the normal use of Kepler, postponing. David Welker
12:27 PM Bug #5272: kepler 2.1 suite can not be started using 'ant run'
It might not be a block for kepler 2.2 installation package release. But many users download kepler based on release-... jianwu jianwu

01/17/2011

05:43 PM Bug #5129: adding and removing configuration properties could be made easier
I have added the ability to make what I call add directives. For example, in a module, if you add a new folder called... David Welker

01/14/2011

02:56 PM Bug #5219: problems when semantically annotating or tagging a composite actor
This is expected behavior. The tag bar displays all tags on the top-level
workflow. The semantic annotation pane, how...
Sean Riddle
02:47 PM Bug #4988: Instantiating a wf as a composite that has a tag doesn't work as expected
(In reply to comment #0)
> However if I tag a workflow, Save Archive it into my local repo workflows
> folder, then f...
Sean Riddle
08:43 AM Bug #5272: kepler 2.1 suite can not be started using 'ant run'
I will look into this bug soon. However, it certainly is not a release blocker for 2.2. Reclassifying. David Welker
04:07 PM Bug #5274 (Resolved): Trying to schedule workflow with report layout puts up prompt about no report layout
To reproduce:
create a workflow
create a report design
File-> Save to kar
Tools->Workflow Scheduler
Find and sel...
Derik Barseghian

01/12/2011

03:52 PM Bug #5272 (Resolved): kepler 2.1 suite can not be started using 'ant run'
Today, one partner tried to start Kepler 2.1 through build-area and failed.
We first tried the build-area at https...
jianwu jianwu
02:28 PM Bug #5260: Problems with unknown free-form tags
I fixed the ColoredListCellRenderer exception (r26677) and have not observed the other exception. Closing for now, un... Sean Riddle
01:45 PM Bug #5260: Problems with unknown free-form tags
(In reply to comment #2)
> Also when opening the kar with free-form tag that's no longer 'in the system'
> because of...
Sean Riddle
01:43 PM Bug #5260: Problems with unknown free-form tags
Thanks Sean. Things work for me too -- up until the very last step of the above procedure: when I click on different ... Derik Barseghian
12:57 PM Bug #5260: Problems with unknown free-form tags
Orphaned tags can now be properly deleted (as of r26636). After fixing the bug, I was unable to reproduce any of the ... Sean Riddle
02:10 PM Bug #5271 (New): No-gui mode needs a way to access private data source
When kepler normally executes a workflow which has actors to access the private data, kepler will prompt a login dial... Jing Tao

01/11/2011

02:00 PM Bug #5190: 6.0WorkingWithDatasets describes OPeNDAP but not DataTurbine actor
Added new DataTurbine actor documentation section to 6.0WorkingWithDatasets.
Whoever updates documentation for 2.2 re...
Derik Barseghian
02:11 AM Bug #5270 (Resolved): No menu bar and labels when non-default locale is set
When system's locale is set to other value than en_US, then Kepler starts without menu bar and buttons don't have lab... Tomasz Żok
05:02 PM Bug #5095: test kepler and wrp for memory leaks
based on the comments 22 and 23, I think it is really hard to fix all memory leaks in Kepler by the code freeze date ... jianwu jianwu

01/08/2011

04:43 PM Bug #5095: test kepler and wrp for memory leaks
Coming up to speed on this.
I've added a step-by-step example of using jvisualvm to find memory leaks. You can find...
Aaron Aaron

01/07/2011

10:20 AM Bug #5095: test kepler and wrp for memory leaks
I'm not that surprised that there is a memory leak in the GUI when
a simple model is run just in Ptolemy, outside of ...
Christopher Brooks
04:37 PM Bug #5095: test kepler and wrp for memory leaks
My tests show Kepler has memory leaks for "workflow open, execution and close" and "workflow open, edit and close". M... jianwu jianwu
05:07 AM Bug #5269: Selectordialog and Case actors do not work well together
RExpression converts the string array to a string scalar. Expression does not. Robert Weber
04:54 PM Bug #5269 (New): Selectordialog and Case actors do not work well together
The Selectordialog actor in Kepler outputs a strange sort of string array that cannot be cast or converted into a str... Robert Weber

01/06/2011

11:31 PM Bug #5191: GUI improvements to Save As
BTW - org.kepler.gui.util.ExtensionFileFilter is very similar to
diva.gui.ExtensionFileFilter.
I cleaned up a few cl...
Christopher Brooks
05:56 PM Bug #5191: GUI improvements to Save As
fixed at r26641.
Turns out Kepler has its own ExtensionFileFilter that I previously missed , which is different fro...
Derik Barseghian
05:14 PM Bug #5268 (New): Dragging modified version of Sinewave actor to canvas causes gui oddity
While testing http://bugzilla.ecoinformatics.org/show_bug.cgi?id=5146 , I came across some gui strangeness. To replic... Derik Barseghian
05:04 PM Bug #5267 (New): Changing a ptolemy.kernel.util.Attribute in Kepler gui doesn't work
While testing http://bugzilla.ecoinformatics.org/show_bug.cgi?id=5146 , I notice if I drag the Sinewave actor to canv... Derik Barseghian
04:55 PM Bug #5266 (Resolved): Two empty boxes inside Sinewave actor and other icon problems for attributes
While testing http://bugzilla.ecoinformatics.org/show_bug.cgi?id=5146 , this bug was found.
From the Reporting suite...
Derik Barseghian
04:39 PM Bug #5146: modifying and saving the composite sinewave actor fails
Derik tested this too and it looks like the specific issue described here has been fixed. We noticed a few other fun... Aaron Aaron

01/05/2011

03:07 PM Bug #5146: modifying and saving the composite sinewave actor fails
i agreed to test this... Derik Barseghian
02:40 PM Bug #5095: test kepler and wrp for memory leaks
status update: after the check in yesterday at version 26623, now there is no big memory leak for window open and clo... jianwu jianwu
08:16 AM Bug #5265: Kepler 2.1.0 has omitted the Publish & subscribe actors from Ptolemy
I found my error (case sensitivity) and am now a happy camper. Sorry to have bothered you. Robert Weber
07:23 AM Bug #5265 (Resolved): Kepler 2.1.0 has omitted the Publish & subscribe actors from Ptolemy
This complementary pair of actors is not present in version 2.1.0 of Kepler for the Mac. I've been trying to "instant... Robert Weber
11:53 PM Bug #5101: Composite Actor windows show wrong title after workflow Rename
Aha, I finally tracked this down. The issue was that the Effigy for the ComponentEntity has a special StringAttribut... Aaron Aaron
04:09 PM Bug #5258: kepler start exception when soft links are in KeplerData/workflows/MyWorkflows
The open dialog now starts at the last used directory. Daniel Crawl

01/04/2011

03:22 PM Bug #5129: adding and removing configuration properties could be made easier
I have made changes to the configuration manager, so that any completely new configuration that is in the active modu... David Welker

01/03/2011

12:39 PM Bug #4693: Ability to save just a report instance
Sure it would be nice to have the File->Export PDF... option, same as File->Print...
Similarly it would be nice if th...
ben leinfelder
12:23 PM Bug #4693: Ability to save just a report instance
Trunk now has a working Save pdf button on the report viewer tab, but leaving this open for feedback -- should this b... Derik Barseghian
12:19 PM Bug #5087: Image report items aren't shown when original image path doesn't resolve
This was merged into trunk. Just tested, works. Derik Barseghian
12:03 PM Bug #4694: workflow run manager - differentiate imported runs
This is done. Derik Barseghian
12:00 PM Bug #5083: possible to save a kar that loses the report layout
This was merged into trunk.
Still need to look into removing stopgap.
Derik Barseghian
11:46 AM Bug #5164: Don't show Workflow Run Manager and tag workflow drop-down list on Schedule tab of Workflow Scheduler view
This bug is no longer relevant. Derik Barseghian
11:26 AM Bug #4473: Add WRM to bottom of report viewer for navigation
Closing this old bug. Derik Barseghian

12/29/2010

09:38 PM Bug #5153: Save As... closes all windows associated with a workflow
Well my first thought was to go build the Nov 11, 2009 Kepler and see what the problem was there. Then see if the pr... Aaron Aaron

12/27/2010

01:17 PM Bug #5263: failure to restart after upgrade from 2.0 to 2.1
The original reporter now reports that he got this to work by logging in as administrator before upgrading. He write... Matt Jones
 

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