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From 10/21/2010 to 11/19/2010

11/19/2010

05:22 PM Bug #4749: run google earth within kepler gui
The GE browser plugin is ran using JavaScript. The built-in HTML viewer, ptolemy.actor.gui.HTMLViewer, does not appea... Daniel Crawl
04:53 PM Bug #5205: Sensor site components not yet in tree
I'll add the KARs, but they won't appear in the tree until 4742 is done (see comment 5). Daniel Crawl
04:52 PM Bug #5050: Automatically filter workflow run manager runs based on selected workflow
With our gui redesigns this is no longer needed. Derik Barseghian
04:50 PM Bug #5202: update existing site layout with span changes
Metadata changes to the site layout are updated. (To see this, you can run two site layouts and toggle a sensor in on... Daniel Crawl

11/17/2010

06:09 PM Bug #5226: User should be warned to design a report if there isn't a report when scheduling
In KarXml class, code was added to see if it has a report karEntry.
For the remote workflows, user will be given a w...
Jing Tao
06:04 PM Bug #5236: The list on the left panel of the scheduler should only show WF objects that can be scheduled.
We removed some local component library on the left panel:
Ontology libraries of local components.
Actor libraries.
...
Jing Tao

11/16/2010

03:21 PM Bug #5226: User should be warned to design a report if there isn't a report when scheduling
Talked with derik and knows: if a kar file has a reporting module, the according karxml will have something looking l... Jing Tao
11:08 AM Bug #5240 (Resolved): NameDuplicationException from SequencePlotter
Reproduce with attached workflow.
ptolemy.kernel.util.IllegalActionException: Error creating effigy and tableau
...
Daniel Crawl

11/10/2010

02:14 PM Bug #5237: Downloading kars on os X 10.6 locks Kepler
Dan fixed this, i checked it in at r26280. Derik Barseghian
01:53 PM Bug #5237 (Resolved): Downloading kars on os X 10.6 locks Kepler
If you search for and attempt to download a remote KAR when on a mac with 10.6, Kepler freezes forever. This doesn't ... Derik Barseghian
04:08 PM Bug #5201: track changes on span server
SPAN and the SPAN simulator have been updated with a new connection that reports metadata changes that occur for sens... Daniel Crawl

11/09/2010

01:55 PM Bug #5095: test kepler and wrp for memory leaks
In Reporting, if you save a workflow that has a report design, modify the workflow and save again, the report layout ... Derik Barseghian
09:24 AM Bug #5208: Setting sensor sampling rate <1 causes errors
I've updated the sensor actor so that the sampling period must be an integer > 0; this appears to be the requirement ... Daniel Crawl

11/05/2010

01:58 PM Bug #5032: Workflow Run Manager - ability to connect to different prov stores from gui actions
Some of comment#2 is no longer relevant:
-1) automatically filtering runs based on a workflow selection no longer rel...
Derik Barseghian
01:44 PM Bug #5049: Prompt for credentials when connecting to remote kepler server
This new tab is no longer relevant, we've decided to use the existing Components servers as remote stores.
(In reply...
Derik Barseghian

11/04/2010

05:58 PM Bug #5233: Remote component search messes up returns which have the same karFileName in kar xml
for comment 1:
Ben: it is in kepler-dev.nceas.ucsb.edu/kepler. You may find the two items there.
Jing Tao
05:55 PM Bug #5233: Remote component search messes up returns which have the same karFileName in kar xml
I dug around and found in method EcogridRepositoryLibrary.createKarLevel():
it used the kar file name as the entity n...
Jing Tao

11/03/2010

04:56 PM Bug #5095: test kepler and wrp for memory leaks
In r26239 I've changed the ObjectManager's _namedObjs WeakHashMap back to a HashMap, see bug#5200 for details on some... Derik Barseghian
04:29 PM Bug #5200: WorkflowRun and Reporting artifacts no longer put into run-kars
I wasn't able to keep the WeakHashMap, and with r26239 I've changed it back to a HashMap. In r26239 I also changed th... Derik Barseghian
03:18 PM Bug #5200: WorkflowRun and Reporting artifacts no longer put into run-kars
Changing the WeakHashMap back to a HashMap in ObjectManager fixes this bug -- the Reporting karEntryHandlers were una... Derik Barseghian

11/02/2010

01:34 PM Bug #4281: ant update produces message about running svn cleanup
I am also experiencing this bug with Windows 7 64-bit
when I run:
ant update
I get the same message:
"[update-mod...
Jonathan Boright
12:32 PM Bug #5172: Exceptions are sometimes thrown during sensor workflow run
I took a quick look at the
Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException
at
sun.java2d.p...
Christopher Brooks
12:14 PM Bug #4753: create gui for scheduled execution of sensor workflows on server
Item 1 on above was described in a new bug:
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=5236
Item 2 on above ...
Jing Tao
12:01 PM Bug #5236 (Resolved): The list on the left panel of the scheduler should only show WF objects that can be scheduled.
In the scheduler, the list on the left should only show WF objects that
can be scheduled.
Jing Tao
11:59 AM Bug #5235 (Resolved): Scheduler GUI can schedule any wf (even local ones).
Current scheduler only being able to schedule wfs that have already been uploaded seems limiting. A better model woul... Jing Tao

11/01/2010

10:44 AM Bug #5225: problems loading & saving KARs when disconnected
This might also be a problem when trying to read the KAR XML schema for validating it (I believe the namespace points... ben leinfelder
10:40 AM Bug #5232: unable to open KARs saved beneath absent (e.g. third party) modules
A warning message about the required dependency not being met seems like the best option. Especially if it is integra... ben leinfelder
10:32 AM Bug #5233: Remote component search messes up returns which have the same karFileName in kar xml
What server are these on? I can't see them on http://library.kepler-project.org/kepler ben leinfelder

10/30/2010

05:25 PM Bug #5172: Exceptions are sometimes thrown during sensor workflow run
fireAtCurrentTime() is now being called in a ChangeRequest and this appears to stop the exceptions related to DE. Thi... Daniel Crawl

10/29/2010

10:23 AM Bug #5230: saving workflow that has instances of user created class to a KAR gives errors
Fixed. Daniel Crawl

10/28/2010

02:57 PM Bug #5233 (Resolved): Remote component search messes up returns which have the same karFileName in kar xml
On 2010-09-01, Jones uploaded the kar xml 2099.22.1 and kar file 2099.21.1. In the kar xml, it says the kar file (20... Jing Tao
02:17 PM Bug #5232 (Resolved): unable to open KARs saved beneath absent (e.g. third party) modules
This isn't an issue in 2.1, since apple-extensions is loaded by all OSes in 2.1, but on trunk apple-extensions is now... Derik Barseghian
01:56 PM Bug #5230: saving workflow that has instances of user created class to a KAR gives errors
User's trace is:
ptolemy.kernel.util.IllegalActionException: Cannot find class: Expression2
Because:
-- no protocol...
Derik Barseghian
11:45 AM Bug #5230 (Resolved): saving workflow that has instances of user created class to a KAR gives errors
User reports the following:
In the past year I have built many workflows as part of an on-going project... In seve...
Derik Barseghian
01:15 PM Bug #5231: Tools => Preferences menu item gives error on trunk
fixed at r26200 Derik Barseghian
12:39 PM Bug #5231 (Resolved): Tools => Preferences menu item gives error on trunk
This doesn't happen on 2.1 but on trunk Tools => Preferences doesn't work, this error occurs:
Couldn't open the Pefe...
Derik Barseghian
10:15 AM Bug #5229 (Resolved): Poor component search performance
Here is email from Matt:
Hi Jing,
Another thing about Kepler -- I noticed that that the search for remote comp...
Jing Tao
06:54 AM Bug #5228 (Resolved): Load splash screen and icons from the classpath, not specific modules.
Currently, the splash screen and icons appears to be loaded from specific modules rather than the classpath. This mak... David Welker
06:50 AM Bug #5227 (Resolved): Finish work on installers.
I have finally reworked the Mac installer so that it is distributed as a .dmg file and installed in a manner typical ... David Welker
06:46 AM Bug #5167: Fix bug so that the correct modules.txt is always used.
To clarify, if the current-suite.txt is set, then the modules.txt in the build-area is ignored. This is incorrect beh... David Welker
06:42 AM Bug #5093: module manager can leave kepler in broken or unexpected states
This is finally done. The module manager can always be run in stand-alone mode. What is left is to invoke the module ... David Welker
06:53 PM Bug #5226 (Resolved): User should be warned to design a report if there isn't a report when scheduling
The user should be warned to design a report and upload it if there isn't a report when scheduling. Matt think this p... Jing Tao
06:52 PM Bug #4753: create gui for scheduled execution of sensor workflows on server
Here are suggestions from Matt:
1)I in the scheduler, the list on the left should only show WF objects that can be s...
Jing Tao
06:08 PM Bug #5129: adding and removing configuration properties could be made easier
In order to make workflow scheduler work, we added a new path -authorization path into the repository. This needs use... Jing Tao
05:55 PM Bug #5095: test kepler and wrp for memory leaks
The WorkflowRunManager no longer keeps a tableauFrame as a member variable,
and the WorkflowRunManagerManager now ext...
Derik Barseghian
05:52 PM Bug #5033: Workflow Run Manager - Allow multiple instances of WRM in one Kepler instance
I removed the member tableauFrame, no longer seems necessary.

(In reply to comment #2)
> Currently, in the WRMM a W...
Derik Barseghian
05:15 PM Bug #5207: Sensor changes color in response to configuring the actor even if no changes made
Discussed this with Dan earlier, working for me too. Derik Barseghian

10/27/2010

10:44 AM Bug #5215: tags from a new ontology created within Tag Manager don't show up in Tagging drop-down
Fixed as of r26189. Sean Riddle
10:42 AM Bug #5212: deselecting ontologies in Tag Manager doesn't remove tags from Tagging drop-down
Fixed as of r26189. Sean Riddle

10/26/2010

02:56 PM Bug #5207: Sensor changes color in response to configuring the actor even if no changes made
I think I've fixed this in my last set of updates. Derik, please verify. Daniel Crawl
02:51 PM Bug #5172: Exceptions are sometimes thrown during sensor workflow run
Another GUI exception:
Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException
at sun.java2d.pipe.Duc...
Daniel Crawl
02:26 PM Bug #5206: Importing or opening a sensor site doesn't open into the sensor site view
The remaining problem (opening KAR into workflow editor) is in 4744. Daniel Crawl
02:23 PM Bug #5206: Importing or opening a sensor site doesn't open into the sensor site view
Importing a sensor site now creates a new window and uses the EV model type. It also appears to be correctly setting ... Daniel Crawl
11:37 AM Bug #5225: problems loading & saving KARs when disconnected
Fixed in r26177. Sean Riddle
11:22 AM Bug #5225 (Resolved): problems loading & saving KARs when disconnected
I can't open a workflow KAR without a network connection. Here's the exception:
org.kepler.objectmanager.cache.Cac...
Daniel Crawl
 

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