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From 10/12/2010 to 11/10/2010

11/10/2010

02:14 PM Bug #5237: Downloading kars on os X 10.6 locks Kepler
Dan fixed this, i checked it in at r26280. Derik Barseghian
01:53 PM Bug #5237 (Resolved): Downloading kars on os X 10.6 locks Kepler
If you search for and attempt to download a remote KAR when on a mac with 10.6, Kepler freezes forever. This doesn't ... Derik Barseghian
04:08 PM Bug #5201: track changes on span server
SPAN and the SPAN simulator have been updated with a new connection that reports metadata changes that occur for sens... Daniel Crawl

11/09/2010

01:55 PM Bug #5095: test kepler and wrp for memory leaks
In Reporting, if you save a workflow that has a report design, modify the workflow and save again, the report layout ... Derik Barseghian
09:24 AM Bug #5208: Setting sensor sampling rate <1 causes errors
I've updated the sensor actor so that the sampling period must be an integer > 0; this appears to be the requirement ... Daniel Crawl

11/05/2010

01:58 PM Bug #5032: Workflow Run Manager - ability to connect to different prov stores from gui actions
Some of comment#2 is no longer relevant:
-1) automatically filtering runs based on a workflow selection no longer rel...
Derik Barseghian
01:44 PM Bug #5049: Prompt for credentials when connecting to remote kepler server
This new tab is no longer relevant, we've decided to use the existing Components servers as remote stores.
(In reply...
Derik Barseghian

11/04/2010

05:58 PM Bug #5233: Remote component search messes up returns which have the same karFileName in kar xml
for comment 1:
Ben: it is in kepler-dev.nceas.ucsb.edu/kepler. You may find the two items there.
Jing Tao
05:55 PM Bug #5233: Remote component search messes up returns which have the same karFileName in kar xml
I dug around and found in method EcogridRepositoryLibrary.createKarLevel():
it used the kar file name as the entity n...
Jing Tao

11/03/2010

04:56 PM Bug #5095: test kepler and wrp for memory leaks
In r26239 I've changed the ObjectManager's _namedObjs WeakHashMap back to a HashMap, see bug#5200 for details on some... Derik Barseghian
04:29 PM Bug #5200: WorkflowRun and Reporting artifacts no longer put into run-kars
I wasn't able to keep the WeakHashMap, and with r26239 I've changed it back to a HashMap. In r26239 I also changed th... Derik Barseghian
03:18 PM Bug #5200: WorkflowRun and Reporting artifacts no longer put into run-kars
Changing the WeakHashMap back to a HashMap in ObjectManager fixes this bug -- the Reporting karEntryHandlers were una... Derik Barseghian

11/02/2010

01:34 PM Bug #4281: ant update produces message about running svn cleanup
I am also experiencing this bug with Windows 7 64-bit
when I run:
ant update
I get the same message:
"[update-mod...
Jonathan Boright
12:32 PM Bug #5172: Exceptions are sometimes thrown during sensor workflow run
I took a quick look at the
Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException
at
sun.java2d.p...
Christopher Brooks
12:14 PM Bug #4753: create gui for scheduled execution of sensor workflows on server
Item 1 on above was described in a new bug:
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=5236
Item 2 on above ...
Jing Tao
12:01 PM Bug #5236 (Resolved): The list on the left panel of the scheduler should only show WF objects that can be scheduled.
In the scheduler, the list on the left should only show WF objects that
can be scheduled.
Jing Tao
11:59 AM Bug #5235 (Resolved): Scheduler GUI can schedule any wf (even local ones).
Current scheduler only being able to schedule wfs that have already been uploaded seems limiting. A better model woul... Jing Tao

11/01/2010

10:44 AM Bug #5225: problems loading & saving KARs when disconnected
This might also be a problem when trying to read the KAR XML schema for validating it (I believe the namespace points... ben leinfelder
10:40 AM Bug #5232: unable to open KARs saved beneath absent (e.g. third party) modules
A warning message about the required dependency not being met seems like the best option. Especially if it is integra... ben leinfelder
10:32 AM Bug #5233: Remote component search messes up returns which have the same karFileName in kar xml
What server are these on? I can't see them on http://library.kepler-project.org/kepler ben leinfelder

10/30/2010

05:25 PM Bug #5172: Exceptions are sometimes thrown during sensor workflow run
fireAtCurrentTime() is now being called in a ChangeRequest and this appears to stop the exceptions related to DE. Thi... Daniel Crawl

10/29/2010

10:23 AM Bug #5230: saving workflow that has instances of user created class to a KAR gives errors
Fixed. Daniel Crawl

10/28/2010

02:57 PM Bug #5233 (Resolved): Remote component search messes up returns which have the same karFileName in kar xml
On 2010-09-01, Jones uploaded the kar xml 2099.22.1 and kar file 2099.21.1. In the kar xml, it says the kar file (20... Jing Tao
02:17 PM Bug #5232 (Resolved): unable to open KARs saved beneath absent (e.g. third party) modules
This isn't an issue in 2.1, since apple-extensions is loaded by all OSes in 2.1, but on trunk apple-extensions is now... Derik Barseghian
01:56 PM Bug #5230: saving workflow that has instances of user created class to a KAR gives errors
User's trace is:
ptolemy.kernel.util.IllegalActionException: Cannot find class: Expression2
Because:
-- no protocol...
Derik Barseghian
11:45 AM Bug #5230 (Resolved): saving workflow that has instances of user created class to a KAR gives errors
User reports the following:
In the past year I have built many workflows as part of an on-going project... In seve...
Derik Barseghian
01:15 PM Bug #5231: Tools => Preferences menu item gives error on trunk
fixed at r26200 Derik Barseghian
12:39 PM Bug #5231 (Resolved): Tools => Preferences menu item gives error on trunk
This doesn't happen on 2.1 but on trunk Tools => Preferences doesn't work, this error occurs:
Couldn't open the Pefe...
Derik Barseghian
10:15 AM Bug #5229 (Resolved): Poor component search performance
Here is email from Matt:
Hi Jing,
Another thing about Kepler -- I noticed that that the search for remote comp...
Jing Tao
06:54 AM Bug #5228 (Resolved): Load splash screen and icons from the classpath, not specific modules.
Currently, the splash screen and icons appears to be loaded from specific modules rather than the classpath. This mak... David Welker
06:50 AM Bug #5227 (Resolved): Finish work on installers.
I have finally reworked the Mac installer so that it is distributed as a .dmg file and installed in a manner typical ... David Welker
06:46 AM Bug #5167: Fix bug so that the correct modules.txt is always used.
To clarify, if the current-suite.txt is set, then the modules.txt in the build-area is ignored. This is incorrect beh... David Welker
06:42 AM Bug #5093: module manager can leave kepler in broken or unexpected states
This is finally done. The module manager can always be run in stand-alone mode. What is left is to invoke the module ... David Welker
06:53 PM Bug #5226 (Resolved): User should be warned to design a report if there isn't a report when scheduling
The user should be warned to design a report and upload it if there isn't a report when scheduling. Matt think this p... Jing Tao
06:52 PM Bug #4753: create gui for scheduled execution of sensor workflows on server
Here are suggestions from Matt:
1)I in the scheduler, the list on the left should only show WF objects that can be s...
Jing Tao
06:08 PM Bug #5129: adding and removing configuration properties could be made easier
In order to make workflow scheduler work, we added a new path -authorization path into the repository. This needs use... Jing Tao
05:55 PM Bug #5095: test kepler and wrp for memory leaks
The WorkflowRunManager no longer keeps a tableauFrame as a member variable,
and the WorkflowRunManagerManager now ext...
Derik Barseghian
05:52 PM Bug #5033: Workflow Run Manager - Allow multiple instances of WRM in one Kepler instance
I removed the member tableauFrame, no longer seems necessary.

(In reply to comment #2)
> Currently, in the WRMM a W...
Derik Barseghian
05:15 PM Bug #5207: Sensor changes color in response to configuring the actor even if no changes made
Discussed this with Dan earlier, working for me too. Derik Barseghian

10/27/2010

10:44 AM Bug #5215: tags from a new ontology created within Tag Manager don't show up in Tagging drop-down
Fixed as of r26189. Sean Riddle
10:42 AM Bug #5212: deselecting ontologies in Tag Manager doesn't remove tags from Tagging drop-down
Fixed as of r26189. Sean Riddle

10/26/2010

02:56 PM Bug #5207: Sensor changes color in response to configuring the actor even if no changes made
I think I've fixed this in my last set of updates. Derik, please verify. Daniel Crawl
02:51 PM Bug #5172: Exceptions are sometimes thrown during sensor workflow run
Another GUI exception:
Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException
at sun.java2d.pipe.Duc...
Daniel Crawl
02:26 PM Bug #5206: Importing or opening a sensor site doesn't open into the sensor site view
The remaining problem (opening KAR into workflow editor) is in 4744. Daniel Crawl
02:23 PM Bug #5206: Importing or opening a sensor site doesn't open into the sensor site view
Importing a sensor site now creates a new window and uses the EV model type. It also appears to be correctly setting ... Daniel Crawl
11:37 AM Bug #5225: problems loading & saving KARs when disconnected
Fixed in r26177. Sean Riddle
11:22 AM Bug #5225 (Resolved): problems loading & saving KARs when disconnected
I can't open a workflow KAR without a network connection. Here's the exception:
org.kepler.objectmanager.cache.Cac...
Daniel Crawl

10/20/2010

02:33 PM Bug #5223 (Resolved): Store the last timestamp of data store for a sensor to the local database
Once the data set for a specific time interval is stored in the metacat, we need to store the last timestamp interval... manish manish
02:30 PM Bug #5222 (Resolved): Store data set file and associated EML file into metacat
Given a data set file path and the EML file, store the data and EML file to metacat. Seems that we use the already ex... manish manish
02:28 PM Bug #5221 (Resolved): Create EML string
Given a dataset file path string and sensorML string, create the eml string for the same. manish manish
02:27 PM Bug #5220 (Resolved): Create data chunks having same metadata info for a time interval
Given a sensorId and a series of timestamps (since a previous date) that reflect when the metadata for the sensor cha... manish manish
02:21 PM Bug #5219 (Resolved): problems when semantically annotating or tagging a composite actor
After semantically annotating a composite actor with the Semantic Type Annotation menu, the new semantic annotation d... Derik Barseghian
02:18 PM Bug #5218 (Resolved): Create sensorML string
Given the metadata string, parse this info to create the sensorML format for the same. manish manish
02:17 PM Bug #5217 (Resolved): Retrieve the metadata of a sensor at a specific timestamp
Given a sensor id and a timestamp, retrieve the metadata of the sensor at that specific timestamp. This information i... manish manish
02:14 PM Bug #5216 (Resolved): Retrieve the timestamps for all the metadata changes that occurred since a previous time
This bug implements the feature which takes a sensor id and the last time stamp sine the data was stored in the metac... manish manish
02:12 PM Bug #5215 (Resolved): tags from a new ontology created within Tag Manager don't show up in Tagging drop-down
If I open the Tag Manager and use the New button to create a new ontology, use the Add Subclass button to add a few t... Derik Barseghian
02:10 PM Bug #5214 (Resolved): Retrieve the last timestamp for which a sensor's data was stored in metacat
This bug implements the feature to retrieve the last timestamp for which a sensor's data was stored in metacat. For e... manish manish
02:06 PM Bug #5213 (Resolved): Query dataturbine server to retrieve the sensors
This bug implements the feature to query a dataturbine server to retrieve all the associated sensors. The following i... manish manish
02:05 PM Bug #5212 (Resolved): deselecting ontologies in Tag Manager doesn't remove tags from Tagging drop-down
If you open the Tag Manager, deselect all the Tag Bar? checkboxes, hit Ok, all the tags still show beneath the Tag dr... Derik Barseghian
05:45 PM Bug #5201: track changes on span server
I've updated the simulator to report metadata changes, and SpanToDT to write the changes to DT. All that's left is to... Daniel Crawl

10/19/2010

01:42 PM Bug #5210 (New): Focus stolen from user trying to drag components around during execution
When trying to drag around a component during a sensor site workflow execution, focus on the component is lost. This ... Derik Barseghian
05:34 PM Bug #5208 (Resolved): Setting sensor sampling rate <1 causes errors
If you configure a sensor actor to a sensor rate less than 1, like .5 or .9, you quickly get a few different types of... Derik Barseghian
05:21 PM Bug #5207 (Resolved): Sensor changes color in response to configuring the actor even if no changes made
If you import a sensor site, and don't run it, but simply Configure Actor a given sensor actor, and then hit cancel a... Derik Barseghian
05:16 PM Bug #5206 (Resolved): Importing or opening a sensor site doesn't open into the sensor site view
Importing or opening a saved sensor site doesn't necessarily change your set of views to Sensor Site and Plot Designe... Derik Barseghian
05:12 PM Bug #5205 (Resolved): Sensor site components not yet in tree
When in Sensor Site view, the component library is empty. The SpanActor, Datalogger, and Sensor components should sho... Derik Barseghian

10/18/2010

03:38 PM Bug #5204 (Resolved): kepler application menus on each kepler window instead of in mac menu bar
On trunk, kepler's application menu items are back on each kepler window (ala windows and linux), instead of up in th... Derik Barseghian
02:20 PM Bug #4763: create gui to access datalogger program
After discussion with Dan changing to an ER.
It would be nice to be able to see the entire program on the logger, and...
Derik Barseghian
01:32 PM Bug #5203: Kepler wont start
I also was not able to reproduce this problem on Mac using a freshly created installer that had "kepler.sh" in it (un... David Welker
12:52 PM Bug #5203: Kepler wont start
I'm unable to replicate on ubuntu, with Sun's java 1.5.0_13.
I was able to launch Kepler-2.0 (linux installer version...
Derik Barseghian
10:01 AM Bug #5203 (Resolved): Kepler wont start
I usually start Kepler with the command ./Kepler-2.0/kepler.sh
Today, this gives me the error below. Reinstalling ...
David LeBauer
11:29 AM Bug #4752: create a sensor plots gui
Thanks for the good screencast. I also played around with it and have some comments:
Plot Viewer:
- The initial ra...
Daniel Crawl

10/15/2010

03:16 PM Bug #5202 (In Progress): update existing site layout with span changes
An existing site layout should be updated with any changes performed on the SPAN server when the workflow is run. Thi... Daniel Crawl
02:55 PM Bug #5201 (Resolved): track changes on span server
When a command is successfully issued to a SPAN server, e.g., turn sensor off, change sampling rate, etc., the comman... Daniel Crawl
02:37 PM Bug #4743: create gui to edit documentation metadata for component
The actor parameter editor dialog seems sufficient. Daniel Crawl
12:32 PM Bug #4068: File Menu should display 5 most recently used workflows
A menu for recently opened files was added to Ptolemy some time ago.
I've updated Kepler's menu mapper so that the m...
Daniel Crawl

10/14/2010

04:23 PM Bug #5200 (Resolved): WorkflowRun and Reporting artifacts no longer put into run-kars
A run-kar exported from the Workflow Run Manager on trunk no longer contains the workflowRun and roml and rio artifac... Derik Barseghian
10:40 AM Bug #5142: comma improperly inserted in kar filename rather than a period (.)
re-assign to Madhu after discussing with Madhu and Ilkay. jianwu jianwu
 

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