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From 05/19/2012 to 06/17/2012

06/18/2012

08:57 PM Bug #5539: Open Actor does not find the actor source code when Kepler is invoked from within Eclipse
Fixed with changes to build-area/src/org/kepler/build/ide/Eclipse.java
Unfortunately, the path to the src/ directory ...
Christopher Brooks
06:39 PM Bug #4926: Examine Kepler for duplicated Ptolemy code
./actors/src/org/sdm/spa/gui/ShellTextArea.java
has trivial differences from
ptolemy/gui/ShellTextArea.java, so I rem...
Christopher Brooks
05:10 PM Bug #4989: The installer should offer to start Kepler
Fixed.
The user is now prompted as to whether they want to start up Kepler
as part of the installation process.
I ad...
Christopher Brooks
05:08 PM Bug #5020: 2.0-RC3 installer: R Kepler Module is not optional
Fixed.
I commented out the pack selection pane in
build-area/resources/installer/windows/izpack.ftl
Christopher Brooks

06/17/2012

04:51 PM Bug #5449: Running ant should include instructions about updating kepler-tasks.jar
This was fixed awhile ago. Christopher Brooks
04:40 PM Bug #4908: actor/director/attribute .xml file documentation needs to be updated
The actor documentation should be reviewed and updated before 2.4.0. Christopher Brooks
04:29 PM Bug #4995: ant installer fails under Linux
The installer target was removed from build.xml, so this bug is moot.
I was able to build a Windows installer under ...
Christopher Brooks
04:05 PM Bug #4281: ant update produces message about running svn cleanup
The problem where "ant update" fails under Windows continues to occur.
Under Windows Server 2008 R2, I got
[update-m...
Christopher Brooks
02:24 PM Bug #5020: 2.0-RC3 installer: R Kepler Module is not optional
The Kepler-2.3 Windows installer has a window for selecting which packs
are to be installed.
However, Kepler is th...
Christopher Brooks
01:57 PM Bug #3801: open dialog, common places pane has white box instead of text
Fixed.
data-handling/src/org/ecoinformatics/seek/querybuilder/QBApp.java was updated:
> 919 | crawl | 2012-06-11 17:...
Christopher Brooks
01:40 PM Bug #5588: Enter and Tab behavior has changed in parameter configuration dialog
The remaining issue here is that in EditParameters, if the focus is in a line entry, then hitting the enter (aka retu... Christopher Brooks

06/16/2012

08:27 PM Bug #5052: default file open directory of Kepler 2.0
I'm reopening this because there is some confusion about what directory
Kepler opens with File->Open.
The initial di...
Christopher Brooks
08:00 PM Bug #5627: List all possible port types in actor Types drop down list
I modified
ptolemy/actor/gui/PortConfigurerDialog.java
so that it gets the types from the TypeLattice. The code is:
...
Christopher Brooks
07:22 PM Bug #5576: memory leak in ptolemy.data.expr.CachedMethod
This is possibly fixed in r63763 in the ptII tree.
Basically, I had to add better equals() and hashCode() methods to
...
Christopher Brooks
05:01 PM Bug #5403: Improve the performance of the workflow archiving data from dataturbine to metacat
The sensor data read from DT is no longer written to file system, but written directly to EcogridWriter via ObjectTok... Daniel Crawl

06/15/2012

04:52 PM Bug #5403: Improve the performance of the workflow archiving data from dataturbine to metacat
Modified EcogridWriter actor:
- input port for object tokens as the source data
- retries if uploading fails
- guara...
Daniel Crawl
04:35 PM Bug #5602: Timezone confusion using the scheduler
I tried testing by scheduling with kepler-dev, but i get an error which includes this text:
WorkflowScheduler.checkU...
Derik Barseghian
04:25 PM Bug #5628 (New): possible to get NPE when right-clicking on kar in Components tree
It's possible to get this NPE when right-clicking on a KAR in the Components pane. I don't have a replication procedu... Derik Barseghian
04:02 PM Bug #5623: Outline tab context menu problems
Looks good at r29962. Thanks, closing. Derik Barseghian
03:22 PM Bug #5623: Outline tab context menu problems
I think it's fixed in r29960. I left Show On Canvas for attributes, ports, and relations since it's useful to be able... Daniel Crawl
03:57 PM Bug #5627 (New): List all possible port types in actor Types drop down list
It would be nice if on an actor's port Type drop down list, all possible types were listed. If this list were automat... Derik Barseghian
03:54 PM Bug #5545: Configure Ports dialog Type column gui annoyances
Much better, thanks. Closing. Derik Barseghian
03:30 PM Bug #5052: default file open directory of Kepler 2.0
As discussed today, it would be good idea if we can have demo workflows in Kepler actor repository at the left part o... jianwu jianwu
03:29 PM Bug #5240: NameDuplicationException from SequencePlotter
I'm closing this because I can't reproduce it in the current tree.
The problem is that a model with two plots was pro...
Christopher Brooks
03:11 PM Bug #5607: constant actor icon won't automatically re-size since 2.3.
I've backed out a portion of this change:
2011-03-03 16:41 cshelton
* [r60470] /trunk/ptolemy/vergil/icon/Attribu...
Christopher Brooks
10:36 AM Bug #5607: constant actor icon won't automatically re-size since 2.3.
If the value of a Const actor is a long string, then the icon is not truncated.
This occurs in both Kepler and Vergil.
Christopher Brooks
02:30 PM Bug #5565: deal with licensing for oracle jar in core
Christopher removed the jar from Ptolemy, and I removed it from Kepler. I also updated the error messages when the ja... Daniel Crawl
02:23 PM Bug #5571: user request: show execution time in runtime window
The status bar now displays the amount of time and memory consumed.
The change is ptII 63760
Christopher Brooks
02:19 PM Bug #5286: Remove the override of EntityTreeModel
Removed at r29957.
Reopen this bug if you discover a change in component tree behavior in the sensor-view suite.
Derik Barseghian
12:43 PM Feature #5626 (New): interacting with kepler.sh to know the status and other information in batch-mode.
When we run kepler in batch mode, it's good to know its status and other information.
CAMERA has done something fo...
jianwu jianwu
12:21 PM Bug #5625 (Resolved): create kepler documentation for 2.4
we need new documentation for 2.4. jianwu jianwu
11:50 AM Bug #5509: How do I run the demos
Enable the demos to show up in the actor tree with their full version.
Module demos should also be displayed.
Ilkay Altintas
11:48 AM Bug #5448: cannot start Kepler using non-IcedTea OpenJDK
Fixed in Kepler 2.3 and in the Kepler devel trunk
bash-3.2$ java -version
java version "1.6.0_22"
OpenJDK Runtime En...
Christopher Brooks
11:47 AM Bug #5498: Issue a patch for ptolemy classpath problem in kepler-2.2
Won't fix. Use 2.3. If the patch is needed for 2.2, reopen the bug only to fix it. Ilkay Altintas
11:27 AM Bug #5279: HSQL databases use default account
Maybe generate a new usename or password at runtime and save it under kepler data. Dan will design this. Ilkay Altintas
11:17 AM Bug #5457: Mac OS X: Kepler.app should display module error messages in a window
Christopher says make it depend on Ptolemy. There is a message handler and it could be used to go through the code an... Ilkay Altintas
10:39 AM Bug #5573: remove ptolemy vendors/
2.3 shipped with ptolemy/vendors.
To avoid this in 2.4, when I make the ptII-9-0-beta branch, I'll remove ptolemy/ven...
Christopher Brooks
08:16 AM Bug #3997: Supporting display actor conversion for command line execution.
The issue here is to make it possible to capture Display and Plotter data.
A team of CMU students modified how the p...
Christopher Brooks
08:00 AM Bug #5266: Two empty boxes inside Sinewave actor and other icon problems for attributes
The reported problem here is that if a Sinewave actor is dragged onto the
canvas in Kepler, then two blank boxes appe...
Christopher Brooks
07:40 AM Bug #2123: need a way to uniquely identify actor in a workflow and locate it
BTW - the ptII tree has a find feature that allows the user to search for
actors or parameters by name.
ptolemy.verg...
Christopher Brooks
08:45 PM Bug #5378: add rety logic to SpanTodt, attempt to recover if RBNB goes down
Whoops, that last sentence doesn't make sense. If SPAN is down, it's down. Should SpanToDT be down, that's when SPAN ... Derik Barseghian
06:30 PM Bug #5378: add rety logic to SpanTodt, attempt to recover if RBNB goes down
Should be fixed with r29937, r29939, r29950, 29951, with the caveat I've only tested using the simulator as SPAN. Lea... Derik Barseghian

06/14/2012

07:15 PM Bug #4711: Problem with L.H. actor tree: ActorName,kar
I fixed the display name to use "Name.kar" instead of "Name,kar". The actor kars were reorganized a long time ago int... Daniel Crawl
07:08 PM Bug #5592: Site Layout DE Director missing documentation
same fix for bug 5355, not 5535 Daniel Crawl
07:07 PM Bug #5592: Site Layout DE Director missing documentation
same fix for 5535:
I updated ShowDocumentationAction: if the documentation is missing, try generating from the sourc...
Daniel Crawl
07:06 PM Bug #5355: actor documentation not included on instantiation
I updated ShowDocumentationAction: if the documentation is missing, try generating from the sources, and if that fail... Daniel Crawl
07:04 PM Bug #5453: ant javadoc -Dfull=true fails
It looks like -Dfull was used to include Kepler and Ptolemy sources when generating the javadocs. However, running wi... Daniel Crawl

06/13/2012

11:10 AM Bug #3997: Supporting display actor conversion for command line execution.
This bug needs to be fixed in version 2.4. I have tried locally using hydro library. It works.
We can either have a...
jianwu jianwu

06/12/2012

04:41 PM Bug #5399: "./kepler.sh -runwf -nogui -nocache" command will not quit if some parameters are set.
The bug is gone. jianwu jianwu
11:43 AM Bug #5578: Add DiffModules with build-area
I checked-in the patch. Thanks for the contribution. Daniel Crawl
11:31 AM Bug #5406: "./kepler.sh -runwf -nogui" won't work if the workflow file path includes 'repository'
fixed Daniel Crawl
10:38 AM Bug #5587: long parameter values get replaced with scrollbar
Patricia fixed in r63735. Daniel Crawl
08:35 AM Bug #4261: Long file name on windows
ptolemy.data.properties has been removed.
That package used to contain files with long names.
I added test to https:/...
Christopher Brooks
08:23 AM Bug #2369: Scrollbars Disappear After Using Fullscreen Mode--Now crashes
There was a problem with scrollbars disappearing after fullscreen, but
View->Full Screen has been removed, so this bu...
Christopher Brooks
05:53 PM Bug #4112: make kepler use OSX dialog boxes
OpenArchiveAction.java and ExportArchiveAction.java were already fixed and use PtGUIUtilities.useFileDialog(). I fixe... Daniel Crawl

06/11/2012

04:06 PM Bug #5437: provenance hsqldb database doesn't behave as though it's properly shutdown when in server mode
This was occurring for all 3 databases in server mode, not just provenance.
Fixed by issuing sql SHUTDOWN instead of...
Daniel Crawl
03:20 PM Bug #5286: Remove the override of EntityTreeModel
Sean can you confirm: am I right in thinking the point of the override was to avoid collapsing the Outline and Plotti... Derik Barseghian
02:59 PM Bug #4112: make kepler use OSX dialog boxes
Ptolemy II now uses java.awt.FileDialog for file open etc.
ptolemy.gui.PtFileChooser is a FileDialog or a FileChooser...
Christopher Brooks
02:23 PM Bug #4112: make kepler use OSX dialog boxes
Christopher, did you finish this? The file dialogs on mac appear to be using java.awt.FileDialog. Daniel Crawl
02:20 PM Bug #5623 (Resolved): Outline tab context menu problems
When you change to the Outline tab, and expand an actor's tree and right-click on one of the actor's ports, attribute... Derik Barseghian
01:58 PM Bug #5603: ant run -Dworkflow=${HOME}/Downloads/SimpleLoop.kar fails
ant run -Dworkflow works for kars now. Daniel Crawl
01:37 PM Bug #5425: error when running -nocache and no .kepler
This does not occur with the kepler or provenance suite. Looks like wrm requires the cache db. Daniel Crawl
01:30 PM Bug #5426: workflow lsid changes when running from command line
fixed: kepler.sh -runwf -noilwc ... will not change the lsid. Daniel Crawl
11:50 AM Bug #5381: run-workflow does not work for KAR files
duplicate of 5603 Daniel Crawl
11:44 AM Bug #5156: ant run for kepler 1.0 fails after clean svn checkout
fixed, you can now run kepler 1.0. Daniel Crawl
11:25 AM Bug #5609: use different port for HSQL db in .kepler
I changed the port to 9004. Daniel Crawl
11:11 AM Bug #5588: Enter and Tab behavior has changed in parameter configuration dialog
I just checked and tab now moves to the next parameter's field, but enter still does not apply the new parameter valu... Daniel Crawl
10:40 AM Bug #5587: long parameter values get replaced with scrollbar
I just checked, and this is still a problem. I added a screen shot. Daniel Crawl

06/07/2012

02:37 PM Bug #5621: Need change the access order type from denyFirst to allowFirst in kepler when it generate emls
Sounds like patches will have to be issued for all relevant versions of kepler at the time of metacat upgrade, and an... Derik Barseghian
02:15 PM Bug #5621 (Resolved): Need change the access order type from denyFirst to allowFirst in kepler when it generate emls
When kepler uploads kar xml and kar files to the metacat repository, the two files will be associated with eml files ... Jing Tao

06/02/2012

05:33 PM Bug #5614 (New): Build system should not require svn binary
Currently, commands like "ant update" require that the user have svn in their path.
It would be good if Windows us...
Christopher Brooks

06/01/2012

10:52 AM Bug #5612 (New): String index out of range in R actor
The R actor can only hand down a certain size of string array through a port.
I have attached a workflow which show...
Claas-Thido Pfaff

05/30/2012

10:01 AM Bug #5602: Timezone confusion using the scheduler
We added two drop-down boxes for both the start and end time. Users can use the boxes to choose time zone names.
In ...
Jing Tao
09:03 AM Bug #5362: Create a GUI so user can easily archive a senosr's data from a dataturbine to a metacat
The menu for this action wasn't added to kepler, so we don't need to remove it.
The code for this feature locates sen...
Jing Tao
08:55 AM Bug #5605: Kepler scheduler doen't work for local workflows in windows os
There is a hard code "/" in file path. After replacing it by File.Separator, it worked. Jing Tao

05/22/2012

02:50 PM Bug #5611 (New): LinearModel actor doesn't handle input variables properly
The R code in the RExpression-based LinearModel actor has several problems:
1. In a linear model, it's the _independ...
Jim Regetz
 

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