Morpho

02/09/2010

11:01 AM Bug #4550: launch4j only works for linux

We removed launch4j lib from morpho. User should specify the launch4j location by himself. Jing Tao

10:53 AM Bug #4418: "about" box displays incorrect version number

This menu was added by Mac OS. We should move the morpho menu bar to the computer menu bar. Jing Tao

10:50 AM Bug #4253: ids for role confict when the person was imported from another package

It is duplicate bug of 3978. Jing Tao

10:40 AM Bug #3946: feature request: a wizard to add content to distribution/online/url

Actually, morpho does have a way to enter urls:
On New Data Table Wizard' Data Location page, user can choose Describ... Jing Tao

10:04 AM Bug #3314: Morpho abstract search comes up with 0

closing - was included in 1.8.0 release ben leinfelder

02/08/2010

03:08 PM Bug #1211: add serialization to steps in DataPackage Wizard

On comment 19, I used the way Jim suggested:
"An alternative to #2 would be to communicate this option in words, but... Jing Tao

03:03 PM Bug #4678: Modify the documentation for 1.8 release

Recaptured new package wizard, data table wizard and morpho frame screenshots. Added descriptions for new features su... Jing Tao

02/04/2010

02:05 PM Bug #4733: Checking the permission of the user before he/she saves a data package to metacat

from regetz:
Jing phrased the bug report in terms of verifying that a user has write permission before saving anythin... ben leinfelder

10:21 AM Bug #4733 (New): Checking the permission of the user before he/she saves a data package to metacat

Currently morpho uploads data files first, then the eml document.
On moropho, a user adds a data file to an eml do... Jing Tao

01/27/2010

05:45 PM Bug #4703 (New): Give user some notification when morpho finds nothing about thesaurus look up

Here is a segment from a Gail Steinhart'email:
Nice thesaurus look up feature - but some more noticeable user feed... Jing Tao

01/26/2010

04:44 PM Bug #1211: add serialization to steps in DataPackage Wizard

Thanks, Jim. I already changed the wording according your suggestion on comment 16. I will take a look at the commnen... Jing Tao

04:21 PM Bug #1211: add serialization to steps in DataPackage Wizard

Morpho version used: morpho-1.8.0-RC1
As a naive user, I would expect that if I open an incomplete document, then cl... Jim Regetz

02:58 PM Bug #1211: add serialization to steps in DataPackage Wizard

I will change it. Jing Tao

02:44 PM Bug #1211: add serialization to steps in DataPackage Wizard

Jim's are good suggestions in comment #16 and I suggest we heed them for usability's sake. Matt Jones

02:36 PM Bug #1211: add serialization to steps in DataPackage Wizard

Morpho version used: morpho-1.8.0-RC1
Minor suggestions about the "Open Crashed Documents" dialog:
1. It looks like ... Jim Regetz

11:47 AM Bug #1211: add serialization to steps in DataPackage Wizard

Morpho version used: morpho-1.8.0-RC1
This issue is related to behaviors #3 and #4 above.
Given the following steps:... Jim Regetz

02:38 PM Bug #4422: morpho installer freezes when it creates short cut on windows 64-bit machine

in intall-windows.xml, I added another "native" element, the installer will work: <native type="izpack" name="ShellLi... Jing Tao

12:15 PM Bug #4422: morpho installer freezes when it creates short cut on windows 64-bit machine

<regetz> one of our grad interns needs to work with morpho today
<regetz> she is using windows 7
<regetz> i thought i... Jing Tao

01/25/2010

02:23 PM Bug #4695: CSS doesn't work on mac installer version

When morpho make the transformation, it should know the css style file location. It reads from config.xml and we set ... Jing Tao

01:45 PM Bug #4695 (Resolved): CSS doesn't work on mac installer version

The morpho metadata display loses color on mac installer version. Howerver, it works on windows and linux installer. ... Jing Tao

10:46 AM Bug #1847: import EML documents into Morpho

Add a new menu - "import" into morpho. User can use it to import an eml document into morpho. For data file, the beha... Jing Tao

10:43 AM Bug #4543: export to FGDC BDP format

I modified the eml2tonbii.xsl style sheet and it can handle eml-2.0.0, eml-2.0.1 and eml-2.1.0 now.
Since BDP only c... Jing Tao

10:25 AM Bug #4646: when upgrading from 2.0.1, morpho did not catch empty <offline> element

When morpho runs the correction wizard, first it will detect the path which has blank value. Then Morpho selects the ... Jing Tao

01/22/2010

06:00 PM Bug #4677: Windows 7 installer/testing

In installer/build/install-windows.xml, there is element named run-privileged. It can make the installer attempt to l... Jing Tao

05:05 PM Bug #4677: Windows 7 installer/testing

Here is the story:
During the installation on windows 7, the installer told me that it didn't have the permission to... Jing Tao

03:02 PM Bug #4677: Windows 7 installer/testing

Morpho installer couldn't be installed under c:\program files folder. Other than this, it worked. But morpho can be i... Jing Tao

05:39 PM Bug #2502: Should be able to enter missingValueCode elements to dp

a bigger morpho window is a great idea in general. Would this help display the buttons that get chopped off on Macs?... Margaret O'Brien

05:10 PM Bug #2502: Should be able to enter missingValueCode elements to dp

The fields are in the current wizard page - but they are not made visible.
We need more room on the page.
Make the fr... ben leinfelder

02:58 PM Bug #3171: Morpho install in Vista does not create a viewable sterr.log file

Just checking the on vista, morpho still can't generate the stderr.log file. Jing Tao

01:17 PM Bug #3171: Morpho install in Vista does not create a viewable sterr.log file

is this possibly a permission issue - the log is usually written to the install directory.
if we can't write to that ... ben leinfelder

02:04 PM Bug #3314: Morpho abstract search comes up with 0

just using <para> to match would free us from concerns of how deeply nested they might be...but it also wouldn't rest... ben leinfelder

01:57 PM Bug #2379: Table metadata lost when trying to import codes from second file

as part of the save-for-later enhancements recently made, this is no longer a problem.
After the message indicating t... ben leinfelder

01:03 PM Bug #4106: Add Cancel button to dialog for closing unsaved package

actually you can cancel it from the "save locally/network?" dialog after you say "yes" - but I added another cancel t... ben leinfelder

12:34 PM Bug #2308: No metadata shown if schemaLocation attribute set improperly

while this example of a "bad" schemaLocation isn't really a valid use of the schemaLocation attribute, I do think we ... ben leinfelder

11:45 AM Bug #1771: Deleting row of taxonomic info in DPW prevents selection of other rows,

now checking for out of range ben leinfelder

11:09 AM Bug #1771: Deleting row of taxonomic info in DPW prevents selection of other rows,

i'll take a look at this ben leinfelder

11:07 AM Bug #3897: Controlled vocabulary for Taxonomic Coverage

not part of 1.8 release. ben leinfelder

10:58 AM Bug #3482: Morpho options hang up on Ubunto 8.04 platform

was a symptom of a different bug ben leinfelder

10:58 AM Bug #4692: Morpho cannot open EML docs with <?xml-stylesheet> directive

recursively going through the XML to find the correct line - not assuming it is on the second. ben leinfelder

10:22 AM Bug #4692 (Resolved): Morpho cannot open EML docs with <?xml-stylesheet> directive

SBC and MCR LTER sites are including <?xml-stylesheet> directives in their EML docs. This is valid XML, but Morpho wa... ben leinfelder

01/21/2010

02:06 PM Bug #4688: miss-labeled Measurement Scale example

this has been fixed.
it is a duplicate of:
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2508 ben leinfelder

01:52 PM Bug #4688: miss-labeled Measurement Scale example

see http://en.wikipedia.org/wiki/Level_of_measurement
I suggest something like this show on the page or help page:
"... gastil gastil

01:43 PM Bug #4688 (Resolved): miss-labeled Measurement Scale example

in the New Data Table Wizard
in Define Attribute or Column
for Category
Relative (statistically interval) sh... gastil gastil

02:04 PM Bug #4687: Morpho logs password in plaintext

the value is not printed for passwords now. ben leinfelder

12:50 PM Bug #4687 (Resolved): Morpho logs password in plaintext

from Gastil:
Morpho logs my password in plain text in the stderr.log file when there is a login error.
Call me para... ben leinfelder

11:15 AM Bug #3482: Morpho options hang up on Ubunto 8.04 platform

will try harder to break it - work with gastil to verify ben leinfelder

11:09 AM Bug #3482: Morpho options hang up on Ubunto 8.04 platform

This is Gastil's experience with Morpho 1.7 and ubuntu:
Using morpho-1.7.0 installed on Ubuntu 8.04 Hardy Heron
usin... Margaret O'Brien

01/20/2010

05:03 PM Bug #4096: Must click tab twice to display metadata for table without read access

this is so odd - must have something to do with differences in the AWT events between the OSes. Looked into it a bit ... ben leinfelder

03:15 PM Bug #3482: Morpho options hang up on Ubunto 8.04 platform

On my Ubuntu 8.04/JRE 1.5.0_15:
-downloaded 1.7.0 installer: no freezing
-ran from current SVN source: no freezing
W... ben leinfelder

02:57 PM Bug #2280: methodStep creation error

I used the wizard to create a methods element. This creates a description/section/para element. THen using the tree e... ben leinfelder

01:28 PM Bug #2988: Custom unit does not allways create the needed <additionalMetadata> tags

now Morpho inserts the appropriate additionalMetadata for any custom units that are used in the datapackage.
Note: cu... ben leinfelder

11:06 AM Bug #2988: Custom unit does not allways create the needed <additionalMetadata> tags

figured out how to recreate this error:
-define a custom unit in one EML file
-save and close that file
-open another... ben leinfelder

12:53 PM Bug #1211: add serialization to steps in DataPackage Wizard

Copy an email which described the morpho behavior:
1. When user clicks the new data package wizard button, a incompl... Jing Tao

01/19/2010

03:33 PM Bug #2206: Tree editor does not properly process additionalMetadata items when "trimming"

it seems that the "Show all" button can get us into dicey territory with the tree editor (adding all sorts of element... ben leinfelder

03:12 PM Bug #2206: Tree editor does not properly process additionalMetadata items when "trimming"

does not seem to be a problem with current Morpho codebase (circa 1.8 release)
additionalMetadata has changed for EM... ben leinfelder

03:02 PM Bug #2957: Other entity does not display other entity Description

added 'entitytype' parameter for the XSL. now the other entity meta data is rendering when appropriate ben leinfelder

01:28 PM Bug #2957: Other entity does not display other entity Description

the stylesheet that is checked in does not render other entity (for some unknown reason). Code is in the XSL to rende... ben leinfelder

12:25 PM Bug #2957: Other entity does not display other entity Description

we'll do this as part of being able to view/convert otherEntity elements to datatable entities. ben leinfelder

11:52 AM Bug #2988: Custom unit does not allways create the needed <additionalMetadata> tags

a few notes:
-this was an EML 2.0.1 document
-the latest codebase creates EML 2.1.0 that has a slightly different add... ben leinfelder

01/17/2010

05:34 PM Bug #4623: docid conflict box needs a button or something

Add Ok button to replace closing the dialog. I tested the change and it seems working to me Jing Tao